RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 CNNM1Q9NRU3 951 aa8.24□□□□□ -1.09
TRAF4-213ENST00000578917 MINPP1Q9UNW1 487 aa8.24□□□□□ -1.09
TRAF4-213ENST00000578917 HSPA6P17066 643 aa8.23□□□□□ -1.09
TRAF4-213ENST00000578917 EPHX2P34913 555 aa8.23□□□□□ -1.09
TRAF4-213ENST00000578917 CASP7P55210 303 aa8.23□□□□□ -1.09
TRAF4-213ENST00000578917 FOXO4P98177 505 aa8.23□□□□□ -1.09
TRAF4-213ENST00000578917 FBXW7Q969H0 707 aa8.23□□□□□ -1.09
TRAF4-213ENST00000578917 L3MBTL3Q96JM7 780 aaPredicted RBP8.23□□□□□ -1.09
TRAF4-213ENST00000578917 TAF1DQ9H5J8 278 aaPredicted RBP8.23□□□□□ -1.09
TRAF4-213ENST00000578917 PODXL2Q9NZ53 605 aa8.23□□□□□ -1.09
TRAF4-213ENST00000578917 KIF16BQ96L93 1317 aa8.23□□□□□ -1.09
TRAF4-213ENST00000578917 ARFGEF1Q9Y6D6 1849 aa8.22□□□□□ -1.09
TRAF4-213ENST00000578917 POTECB2RU33 542 aa8.22□□□□□ -1.09
TRAF4-213ENST00000578917 H7C1D1 291 aa8.22□□□□□ -1.09
TRAF4-213ENST00000578917 ECE2O60344 883 aa8.22□□□□□ -1.09
TRAF4-213ENST00000578917 BCAR3O75815 825 aa8.22□□□□□ -1.09
TRAF4-213ENST00000578917 UBTFL1P0CB47 393 aaPredicted RBP8.22□□□□□ -1.09
TRAF4-213ENST00000578917 EPS15P42566 896 aa8.22□□□□□ -1.09
TRAF4-213ENST00000578917 GMPSP49915 693 aaPredicted RBP8.22□□□□□ -1.09
TRAF4-213ENST00000578917 APLP1P51693 650 aa8.22□□□□□ -1.09
TRAF4-213ENST00000578917 EPHA10Q5JZY3 1008 aa8.22□□□□□ -1.09
TRAF4-213ENST00000578917 CHADLQ6NUI6 762 aa8.22□□□□□ -1.09
TRAF4-213ENST00000578917 HELBQ8NG08 1087 aaPredicted RBP8.22□□□□□ -1.09
TRAF4-213ENST00000578917 ARHGAP45Q92619 1136 aa8.22□□□□□ -1.09
TRAF4-213ENST00000578917 CLUAP1Q96AJ1 413 aa8.22□□□□□ -1.09
TRAF4-213ENST00000578917 SUCLG2Q96I99 432 aa8.22□□□□□ -1.09
TRAF4-213ENST00000578917 ZNF594Q96JF6 807 aaPredicted RBP8.22□□□□□ -1.09
TRAF4-213ENST00000578917 USP44Q9H0E7 712 aa8.22□□□□□ -1.09
TRAF4-213ENST00000578917 LEMD3Q9Y2U8 911 aa8.22□□□□□ -1.09
TRAF4-213ENST00000578917 COL11A2P13942 1736 aaPredicted RBP8.22□□□□□ -1.09
TRAF4-213ENST00000578917 CEP350Q5VT06 3117 aa8.22□□□□□ -1.09
TRAF4-213ENST00000578917 TNRC6CQ9HCJ0 1690 aaKnown RBP8.21□□□□□ -1.09
TRAF4-213ENST00000578917 PSMD14O00487 310 aa8.21□□□□□ -1.1
TRAF4-213ENST00000578917 TAF5LO75529 589 aa8.21□□□□□ -1.1
TRAF4-213ENST00000578917 CHRNDQ07001 517 aa8.21□□□□□ -1.1
TRAF4-213ENST00000578917 RBM26Q5T8P6 1007 aaKnown RBP8.21□□□□□ -1.1
TRAF4-213ENST00000578917 PODNQ7Z5L7 613 aa8.21□□□□□ -1.1
TRAF4-213ENST00000578917 LDHDQ86WU2 507 aa8.21□□□□□ -1.1
TRAF4-213ENST00000578917 FTSJ3Q8IY81 847 aaKnown RBP8.21□□□□□ -1.1
TRAF4-213ENST00000578917 BICC1Q9H694 974 aaKnown RBP8.21□□□□□ -1.1
TRAF4-213ENST00000578917 CNOT7Q9UIV1 285 aaKnown RBP8.21□□□□□ -1.1
TRAF4-213ENST00000578917 ZBTB12Q9Y330 459 aaPredicted RBP8.21□□□□□ -1.1
TRAF4-213ENST00000578917 ZNF804BA4D1E1 1349 aa8.21□□□□□ -1.1
TRAF4-213ENST00000578917 ZBED9Q6R2W3 1325 aa8.21□□□□□ -1.1
TRAF4-213ENST00000578917 BRCA1P38398 1863 aaKnown RBP8.21□□□□□ -1.1
TRAF4-213ENST00000578917 RTL9Q8NET4 1388 aa8.21□□□□□ -1.1
TRAF4-213ENST00000578917 WTIPA6NIX2 430 aaPredicted RBP8.2□□□□□ -1.1
TRAF4-213ENST00000578917 GNAI3P08754 354 aa8.2□□□□□ -1.1
TRAF4-213ENST00000578917 BRPF1P55201 1214 aaPredicted RBP8.2□□□□□ -1.1
TRAF4-213ENST00000578917 ZKSCAN2Q63HK3 967 aa8.2□□□□□ -1.1
TRAF4-213ENST00000578917 ATF7IPQ6VMQ6 1270 aa8.2□□□□□ -1.1
TRAF4-213ENST00000578917 USP50Q70EL3 339 aaPredicted RBP8.2□□□□□ -1.1
TRAF4-213ENST00000578917 VPS37DQ86XT2 251 aa8.2□□□□□ -1.1
TRAF4-213ENST00000578917 KCNQ5Q9NR82 932 aa8.2□□□□□ -1.1
TRAF4-213ENST00000578917 ADARB2Q9NS39 739 aaKnown RBP8.2□□□□□ -1.1
TRAF4-213ENST00000578917 GPRC5DQ9NZD1 345 aa8.2□□□□□ -1.1
TRAF4-213ENST00000578917 DLEC1Q9Y238 1755 aa8.2□□□□□ -1.1
TRAF4-213ENST00000578917 USP17L3A6NCW0 530 aa8.19□□□□□ -1.1
TRAF4-213ENST00000578917 USP17L4A6NCW7 530 aa8.19□□□□□ -1.1
TRAF4-213ENST00000578917 YDJCA8MPS7 323 aa8.19□□□□□ -1.1
TRAF4-213ENST00000578917 FRAT2O75474 233 aaPredicted RBP8.19□□□□□ -1.1
TRAF4-213ENST00000578917 POTEIP0CG38 1075 aa8.19□□□□□ -1.1
TRAF4-213ENST00000578917 POTEJP0CG39 1038 aa8.19□□□□□ -1.1
TRAF4-213ENST00000578917 RPS12P25398 132 aaKnown RBP8.19□□□□□ -1.1
TRAF4-213ENST00000578917 SCNN1DP51172 638 aa8.19□□□□□ -1.1
TRAF4-213ENST00000578917 METTL24Q5JXM2 366 aa8.19□□□□□ -1.1
TRAF4-213ENST00000578917 MAP1SQ66K74 1059 aaPredicted RBP8.19□□□□□ -1.1
TRAF4-213ENST00000578917 USP17L1Q7RTZ2 530 aa8.19□□□□□ -1.1
TRAF4-213ENST00000578917 ZNF804AQ7Z570 1209 aa8.19□□□□□ -1.1
TRAF4-213ENST00000578917 MICALL2Q8IY33 904 aa8.19□□□□□ -1.1
TRAF4-213ENST00000578917 CNTROBQ8N137 903 aa8.19□□□□□ -1.1
TRAF4-213ENST00000578917 OGFOD1Q8N543 542 aa8.19□□□□□ -1.1
TRAF4-213ENST00000578917 DPF2Q92785 391 aa8.19□□□□□ -1.1
TRAF4-213ENST00000578917 COA1Q9GZY4 146 aa8.19□□□□□ -1.1
TRAF4-213ENST00000578917 UTYO14607 1347 aa8.19□□□□□ -1.1
TRAF4-213ENST00000578917 ARFGEF2Q9Y6D5 1785 aa8.19□□□□□ -1.1
TRAF4-213ENST00000578917 TRIM27P14373 513 aa8.18□□□□□ -1.1
TRAF4-213ENST00000578917 INTS3Q68E01 1043 aaKnown RBP8.18□□□□□ -1.1
TRAF4-213ENST00000578917 TTLL5Q6EMB2 1281 aa8.18□□□□□ -1.1
TRAF4-213ENST00000578917 DZIP1LQ8IYY4 767 aaKnown RBP8.18□□□□□ -1.1
TRAF4-213ENST00000578917 KAZALD1Q96I82 304 aa8.18□□□□□ -1.1
TRAF4-213ENST00000578917 YTHDC1Q96MU7 727 aaKnown RBP8.18□□□□□ -1.1
TRAF4-213ENST00000578917 PUS3Q9BZE2 481 aaKnown RBP8.18□□□□□ -1.1
TRAF4-213ENST00000578917 SIL1Q9H173 461 aa8.18□□□□□ -1.1
TRAF4-213ENST00000578917 LRRFIP2Q9Y608 721 aaKnown RBP8.18□□□□□ -1.1
TRAF4-213ENST00000578917 MROH5Q6ZUA9 1318 aa8.18□□□□□ -1.1
TRAF4-213ENST00000578917 SNED1Q8TER0 1413 aa8.18□□□□□ -1.1
TRAF4-213ENST00000578917 ANKRD36CQ5JPF3 1778 aa8.17□□□□□ -1.1
TRAF4-213ENST00000578917 SNAP23O00161 211 aa8.17□□□□□ -1.1
TRAF4-213ENST00000578917 GNAI2P04899 355 aa8.17□□□□□ -1.1
TRAF4-213ENST00000578917 VIL1P09327 827 aaKnown RBP8.17□□□□□ -1.1
TRAF4-213ENST00000578917 USP17L8P0C7I0 530 aa8.17□□□□□ -1.1
TRAF4-213ENST00000578917 MS4A1P11836 297 aa8.17□□□□□ -1.1
TRAF4-213ENST00000578917 GTF2IP78347 998 aa8.17□□□□□ -1.1
TRAF4-213ENST00000578917 HTRA3P83110 453 aa8.17□□□□□ -1.1
TRAF4-213ENST00000578917 TBC1D10BQ4KMP7 808 aaPredicted RBP8.17□□□□□ -1.1
TRAF4-213ENST00000578917 CAVIN4Q5BKX8 364 aa8.17□□□□□ -1.1
TRAF4-213ENST00000578917 RSBN1LQ6PCB5 846 aaPredicted RBP8.17□□□□□ -1.1
TRAF4-213ENST00000578917 SAMD7Q7Z3H4 446 aa8.17□□□□□ -1.1
TRAF4-213ENST00000578917 TXNRD3Q86VQ6 643 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms