RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 TFCP2Q12800 502 aa20.64■□□□□ 0.89
SREBF1-218ENST00000578469 BECN1Q14457 450 aa20.64■□□□□ 0.89
SREBF1-218ENST00000578469 TNNI3KQ59H18 835 aa20.64■□□□□ 0.89
SREBF1-218ENST00000578469 C9orf131Q5VYM1 1079 aa20.64■□□□□ 0.89
SREBF1-218ENST00000578469 CCDC8Q9H0W5 538 aaPredicted RBP20.64■□□□□ 0.89
SREBF1-218ENST00000578469 GPR108Q9NPR9 543 aa20.64■□□□□ 0.89
SREBF1-218ENST00000578469 NIP7Q9Y221 180 aaKnown RBP eCLIP20.64■□□□□ 0.89
SREBF1-218ENST00000578469 FPGT-TNNI3KV9GXZ4 949 aa20.64■□□□□ 0.89
SREBF1-218ENST00000578469 WDR90Q96KV7 1748 aa20.64■□□□□ 0.89
SREBF1-218ENST00000578469 DALRD3Q5D0E6 543 aaKnown RBP20.63■□□□□ 0.89
SREBF1-218ENST00000578469 SUSD4Q5VX71 490 aa20.63■□□□□ 0.89
SREBF1-218ENST00000578469 ANKRD18BA2A2Z9 1011 aa20.62■□□□□ 0.89
SREBF1-218ENST00000578469 TTLL11Q8NHH1 800 aa20.62■□□□□ 0.89
SREBF1-218ENST00000578469 CHMLP26374 656 aa20.61■□□□□ 0.89
SREBF1-218ENST00000578469 FSTL1Q12841 308 aa20.61■□□□□ 0.89
SREBF1-218ENST00000578469 ATG9AQ7Z3C6 839 aa20.61■□□□□ 0.89
SREBF1-218ENST00000578469 SYNE4Q8N205 404 aa20.6■□□□□ 0.89
SREBF1-218ENST00000578469 DNAJC5GQ8N7S2 189 aa20.6■□□□□ 0.89
SREBF1-218ENST00000578469 ZNF594Q96JF6 807 aaPredicted RBP20.6■□□□□ 0.89
SREBF1-218ENST00000578469 RNF181Q9P0P0 153 aa20.6■□□□□ 0.89
SREBF1-218ENST00000578469 CEP126Q9P2H0 1117 aa20.6■□□□□ 0.89
SREBF1-218ENST00000578469 NARFQ9UHQ1 456 aa20.6■□□□□ 0.89
SREBF1-218ENST00000578469 BCORQ6W2J9 1755 aa20.59■□□□□ 0.89
SREBF1-218ENST00000578469 ZPR1O75312 459 aa20.59■□□□□ 0.89
SREBF1-218ENST00000578469 EVI5LQ96CN4 794 aa20.59■□□□□ 0.89
SREBF1-218ENST00000578469 ESYT1Q9BSJ8 1104 aa20.59■□□□□ 0.89
SREBF1-218ENST00000578469 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.59■□□□□ 0.89
SREBF1-218ENST00000578469 TNRC6CQ9HCJ0 1690 aaKnown RBP20.58■□□□□ 0.89
SREBF1-218ENST00000578469 FAM177BA6PVY3 158 aa20.58■□□□□ 0.89
SREBF1-218ENST00000578469 MAP4K4O95819 1239 aaPredicted RBP20.58■□□□□ 0.89
SREBF1-218ENST00000578469 KCNA3P22001 575 aa20.58■□□□□ 0.89
SREBF1-218ENST00000578469 ITGA6P23229 1130 aa20.58■□□□□ 0.89
SREBF1-218ENST00000578469 LRRC24Q50LG9 513 aa20.58■□□□□ 0.89
SREBF1-218ENST00000578469 CCDC85AQ96PX6 553 aaPredicted RBP20.58■□□□□ 0.89
SREBF1-218ENST00000578469 AKAP2Q9Y2D5 859 aa20.58■□□□□ 0.89
SREBF1-218ENST00000578469 NTSR2O95665 410 aa20.57■□□□□ 0.88
SREBF1-218ENST00000578469 ATP5JP18859 108 aa20.57■□□□□ 0.88
SREBF1-218ENST00000578469 USP26Q9BXU7 913 aa20.57■□□□□ 0.88
SREBF1-218ENST00000578469 GREM2Q9H772 168 aa20.57■□□□□ 0.88
SREBF1-218ENST00000578469 TLR7Q9NYK1 1049 aaKnown RBP20.57■□□□□ 0.88
SREBF1-218ENST00000578469 SRP68Q9UHB9 627 aaKnown RBP20.57■□□□□ 0.88
SREBF1-218ENST00000578469 HIP1O00291 1037 aa20.56■□□□□ 0.88
SREBF1-218ENST00000578469 RUFY2Q8WXA3 655 aa20.56■□□□□ 0.88
SREBF1-218ENST00000578469 KLRG1Q96E93 195 aa20.56■□□□□ 0.88
SREBF1-218ENST00000578469 NEUROD6Q96NK8 337 aa20.56■□□□□ 0.88
SREBF1-218ENST00000578469 DBNLQ9UJU6 430 aaKnown RBP20.56■□□□□ 0.88
SREBF1-218ENST00000578469 DDR1Q08345 913 aa20.55■□□□□ 0.88
SREBF1-218ENST00000578469 CCDC152Q4G0S7 254 aa20.55■□□□□ 0.88
SREBF1-218ENST00000578469 USPL1Q5W0Q7 1092 aa20.55■□□□□ 0.88
SREBF1-218ENST00000578469 LDHAL6AQ6ZMR3 332 aa20.55■□□□□ 0.88
SREBF1-218ENST00000578469 DBNDD2Q9BQY9 259 aa20.55■□□□□ 0.88
SREBF1-218ENST00000578469 PUS3Q9BZE2 481 aaKnown RBP20.55■□□□□ 0.88
SREBF1-218ENST00000578469 NYXQ9GZU5 481 aa20.55■□□□□ 0.88
SREBF1-218ENST00000578469 CNNM1Q9NRU3 951 aa20.55■□□□□ 0.88
SREBF1-218ENST00000578469 MYH3P11055 1940 aa20.55■□□□□ 0.88
SREBF1-218ENST00000578469 SCN7AQ01118 1682 aa20.54■□□□□ 0.88
SREBF1-218ENST00000578469 ZC3H4Q9UPT8 1303 aaKnown RBP20.54■□□□□ 0.88
SREBF1-218ENST00000578469 EPB41L2O43491 1005 aaKnown RBP20.54■□□□□ 0.88
SREBF1-218ENST00000578469 HCLS1P14317 486 aaPredicted RBP20.54■□□□□ 0.88
SREBF1-218ENST00000578469 MCCP23508 829 aa20.54■□□□□ 0.88
SREBF1-218ENST00000578469 BOLA2Q9H3K6 86 aa20.54■□□□□ 0.88
SREBF1-218ENST00000578469 DIAPH3Q9NSV4 1193 aa20.54■□□□□ 0.88
SREBF1-218ENST00000578469 GTF2E1P29083 439 aaPredicted RBP20.53■□□□□ 0.88
SREBF1-218ENST00000578469 METTL24Q5JXM2 366 aa20.53■□□□□ 0.88
SREBF1-218ENST00000578469 SETDB2Q96T68 719 aa20.53■□□□□ 0.88
SREBF1-218ENST00000578469 AK9Q5TCS8 1911 aa20.53■□□□□ 0.88
SREBF1-218ENST00000578469 ZNF609O15014 1411 aa20.53■□□□□ 0.88
SREBF1-218ENST00000578469 RTL9Q8NET4 1388 aa20.52■□□□□ 0.88
SREBF1-218ENST00000578469 A0A1B0GUL7 405 aa20.52■□□□□ 0.88
SREBF1-218ENST00000578469 POLRMTO00411 1230 aaKnown RBP20.52■□□□□ 0.88
SREBF1-218ENST00000578469 CHRNA5P30532 468 aa20.52■□□□□ 0.88
SREBF1-218ENST00000578469 SMC1BQ8NDV3 1235 aa20.52■□□□□ 0.88
SREBF1-218ENST00000578469 BCL2L12Q9HB09 334 aa20.52■□□□□ 0.88
SREBF1-218ENST00000578469 RIPOR2Q9Y4F9 1068 aa20.52■□□□□ 0.88
SREBF1-218ENST00000578469 TIMM10P62072 90 aa20.51■□□□□ 0.87
SREBF1-218ENST00000578469 TBC1D9BQ66K14 1250 aa20.51■□□□□ 0.87
SREBF1-218ENST00000578469 BICDL1Q6ZP65 573 aa20.51■□□□□ 0.87
SREBF1-218ENST00000578469 RRAGCQ9HB90 399 aa20.51■□□□□ 0.87
SREBF1-218ENST00000578469 CCDC158Q5M9N0 1113 aa20.5■□□□□ 0.87
SREBF1-218ENST00000578469 GORABQ5T7V8 394 aa20.5■□□□□ 0.87
SREBF1-218ENST00000578469 KIAA1211Q6ZU35 1233 aa20.5■□□□□ 0.87
SREBF1-218ENST00000578469 JMYQ8N9B5 988 aa20.5■□□□□ 0.87
SREBF1-218ENST00000578469 HAUS7Q99871 368 aa20.5■□□□□ 0.87
SREBF1-218ENST00000578469 FSD1Q9BTV5 496 aa20.5■□□□□ 0.87
SREBF1-218ENST00000578469 ANO2Q9NQ90 1003 aa20.5■□□□□ 0.87
SREBF1-218ENST00000578469 MROH5Q6ZUA9 1318 aa20.5■□□□□ 0.87
SREBF1-218ENST00000578469 LAMB2P55268 1798 aa20.49■□□□□ 0.87
SREBF1-218ENST00000578469 SGSM2O43147 1006 aa20.49■□□□□ 0.87
SREBF1-218ENST00000578469 IGHMBP2P38935 993 aaKnown RBP20.49■□□□□ 0.87
SREBF1-218ENST00000578469 HTRA3P83110 453 aa20.49■□□□□ 0.87
SREBF1-218ENST00000578469 ERFEQ4G0M1 354 aa20.49■□□□□ 0.87
SREBF1-218ENST00000578469 SLC10A5Q5PT55 438 aa20.49■□□□□ 0.87
SREBF1-218ENST00000578469 HSCBQ8IWL3 235 aa20.49■□□□□ 0.87
SREBF1-218ENST00000578469 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.49■□□□□ 0.87
SREBF1-218ENST00000578469 MPHOSPH8Q99549 860 aa20.49■□□□□ 0.87
SREBF1-218ENST00000578469 SBF1O95248 1867 aa20.49■□□□□ 0.87
SREBF1-218ENST00000578469 TM4SF1P30408 202 aa20.48■□□□□ 0.87
SREBF1-218ENST00000578469 SLC4A3P48751 1232 aa20.48■□□□□ 0.87
SREBF1-218ENST00000578469 RABEP1Q15276 862 aa20.48■□□□□ 0.87
SREBF1-218ENST00000578469 ATP2B3Q16720 1220 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms