RNA–Protein interactions for RNA: ENST00000578446.1

USP22-208, Transcript of ubiquitin specific peptidase 22, humanhuman

TSL 3

Gene USP22, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP22-208ENST00000578446 IL15P40933 162 aaPredicted RBP13.2□□□□□ -0.3
USP22-208ENST00000578446 METTL24Q5JXM2 366 aa13.2□□□□□ -0.3
USP22-208ENST00000578446 ERC1Q8IUD2 1116 aa13.2□□□□□ -0.3
USP22-208ENST00000578446 PPP4R2Q9NY27 417 aa13.2□□□□□ -0.3
USP22-208ENST00000578446 NOP58Q9Y2X3 529 aaKnown RBP13.2□□□□□ -0.3
USP22-208ENST00000578446 C21orf2O43822 256 aa13.19□□□□□ -0.3
USP22-208ENST00000578446 IGHDP01880 384 aa13.19□□□□□ -0.3
USP22-208ENST00000578446 CHRNDQ07001 517 aa13.19□□□□□ -0.3
USP22-208ENST00000578446 SOGA3Q5TF21 947 aa13.19□□□□□ -0.3
USP22-208ENST00000578446 ATG9AQ7Z3C6 839 aa13.19□□□□□ -0.3
USP22-208ENST00000578446 SLC51AQ86UW1 340 aa13.19□□□□□ -0.3
USP22-208ENST00000578446 SP8Q8IXZ3 490 aa13.19□□□□□ -0.3
USP22-208ENST00000578446 PELP1Q8IZL8 1130 aaKnown RBP13.19□□□□□ -0.3
USP22-208ENST00000578446 ANKRD2Q9GZV1 360 aa13.19□□□□□ -0.3
USP22-208ENST00000578446 DCTPP1Q9H773 170 aa13.19□□□□□ -0.3
USP22-208ENST00000578446 ANKIB1Q9P2G1 1089 aa13.19□□□□□ -0.3
USP22-208ENST00000578446 MINPP1Q9UNW1 487 aa13.19□□□□□ -0.3
USP22-208ENST00000578446 RIPOR2Q9Y4F9 1068 aa13.19□□□□□ -0.3
USP22-208ENST00000578446 RAB11FIP3O75154 756 aa13.18□□□□□ -0.3
USP22-208ENST00000578446 KCNJ4P48050 445 aa13.18□□□□□ -0.3
USP22-208ENST00000578446 CCDC93Q567U6 631 aa13.18□□□□□ -0.3
USP22-208ENST00000578446 CC2D2BQ6DHV5 1058 aa13.18□□□□□ -0.3
USP22-208ENST00000578446 OLFM4Q6UX06 510 aa13.18□□□□□ -0.3
USP22-208ENST00000578446 HELBQ8NG08 1087 aaPredicted RBP13.18□□□□□ -0.3
USP22-208ENST00000578446 GCC1Q96CN9 775 aa13.18□□□□□ -0.3
USP22-208ENST00000578446 CEP126Q9P2H0 1117 aa13.18□□□□□ -0.3
USP22-208ENST00000578446 ZBTB47Q9UFB7 747 aaPredicted RBP13.18□□□□□ -0.3
USP22-208ENST00000578446 XDHP47989 1333 aa13.17□□□□□ -0.3
USP22-208ENST00000578446 GPSM2P81274 684 aa13.17□□□□□ -0.3
USP22-208ENST00000578446 TFCP2Q12800 502 aa13.17□□□□□ -0.3
USP22-208ENST00000578446 B4GALNT3Q6L9W6 998 aa13.17□□□□□ -0.3
USP22-208ENST00000578446 DPP8Q6V1X1 898 aaPredicted RBP13.17□□□□□ -0.3
USP22-208ENST00000578446 C7orf43Q8WVR3 580 aa13.17□□□□□ -0.3
USP22-208ENST00000578446 KIF1BPQ96EK5 621 aa13.17□□□□□ -0.3
USP22-208ENST00000578446 LRRCC1Q9C099 1032 aa13.17□□□□□ -0.3
USP22-208ENST00000578446 BCL11AQ9H165 835 aa13.17□□□□□ -0.3
USP22-208ENST00000578446 NSFL1CQ9UNZ2 370 aaKnown RBP13.17□□□□□ -0.3
USP22-208ENST00000578446 SPEF2Q9C093 1822 aa13.16□□□□□ -0.3
USP22-208ENST00000578446 TAF5LO75529 589 aa13.16□□□□□ -0.3
USP22-208ENST00000578446 UFL1O94874 794 aa13.16□□□□□ -0.3
USP22-208ENST00000578446 PUM3Q15397 648 aaKnown RBP13.16□□□□□ -0.3
USP22-208ENST00000578446 GRIPAP1Q4V328 841 aa13.16□□□□□ -0.3
USP22-208ENST00000578446 CENPQQ7L2Z9 268 aaPredicted RBP13.16□□□□□ -0.3
USP22-208ENST00000578446 RTKN2Q8IZC4 609 aa13.16□□□□□ -0.3
USP22-208ENST00000578446 MPNDQ8N594 471 aa13.16□□□□□ -0.3
USP22-208ENST00000578446 RHPN1Q8TCX5 695 aa13.16□□□□□ -0.3
USP22-208ENST00000578446 GGA1Q9UJY5 639 aa13.16□□□□□ -0.3
USP22-208ENST00000578446 GTF3C3Q9Y5Q9 886 aa13.16□□□□□ -0.3
USP22-208ENST00000578446 LRRC37AA6NMS7 1700 aa13.16□□□□□ -0.3
USP22-208ENST00000578446 SLX4Q8IY92 1834 aa13.16□□□□□ -0.3
USP22-208ENST00000578446 TAF1P21675 1872 aa13.15□□□□□ -0.3
USP22-208ENST00000578446 GOLGB1Q14789 3259 aaKnown RBP13.15□□□□□ -0.3
USP22-208ENST00000578446 SASH1O94885 1247 aa13.15□□□□□ -0.3
USP22-208ENST00000578446 PDE8BO95263 885 aa13.15□□□□□ -0.3
USP22-208ENST00000578446 ATP2B3Q16720 1220 aa13.15□□□□□ -0.3
USP22-208ENST00000578446 SMC5Q8IY18 1101 aa13.15□□□□□ -0.3
USP22-208ENST00000578446 VGLL2Q8N8G2 317 aa13.15□□□□□ -0.3
USP22-208ENST00000578446 IL1RAPL2Q9NP60 686 aa13.15□□□□□ -0.3
USP22-208ENST00000578446 PODXL2Q9NZ53 605 aa13.15□□□□□ -0.3
USP22-208ENST00000578446 AKAP2Q9Y2D5 859 aa13.15□□□□□ -0.3
USP22-208ENST00000578446 C6orf229H3BNL8 230 aa13.14□□□□□ -0.31
USP22-208ENST00000578446 ATP2B4P23634 1241 aa13.14□□□□□ -0.31
USP22-208ENST00000578446 GPR162Q16538 588 aa13.14□□□□□ -0.31
USP22-208ENST00000578446 ANKRD45Q5TZF3 282 aa13.14□□□□□ -0.31
USP22-208ENST00000578446 CLASRPQ8N2M8 674 aaKnown RBP13.14□□□□□ -0.31
USP22-208ENST00000578446 LEMD3Q9Y2U8 911 aa13.14□□□□□ -0.31
USP22-208ENST00000578446 BRCA1P38398 1863 aaKnown RBP13.14□□□□□ -0.31
USP22-208ENST00000578446 ZNF804BA4D1E1 1349 aa13.13□□□□□ -0.31
USP22-208ENST00000578446 KDM2BQ8NHM5 1336 aa13.13□□□□□ -0.31
USP22-208ENST00000578446 ZNF609O15014 1411 aa13.13□□□□□ -0.31
USP22-208ENST00000578446 CACNA1SQ13698 1873 aa13.13□□□□□ -0.31
USP22-208ENST00000578446 SMARCA5O60264 1052 aaPredicted RBP13.13□□□□□ -0.31
USP22-208ENST00000578446 IFIT1P09914 478 aaKnown RBP13.13□□□□□ -0.31
USP22-208ENST00000578446 SLC5A1P13866 664 aa13.13□□□□□ -0.31
USP22-208ENST00000578446 YBX3P16989 372 aaKnown RBP eCLIP13.13□□□□□ -0.312e-6■□□□□ 10.1
USP22-208ENST00000578446 TNNI3KQ59H18 835 aa13.13□□□□□ -0.31
USP22-208ENST00000578446 AACSQ86V21 672 aa13.13□□□□□ -0.31
USP22-208ENST00000578446 SUPT20HQ8NEM7 779 aa13.13□□□□□ -0.31
USP22-208ENST00000578446 TBC1D16Q8TBP0 767 aa13.13□□□□□ -0.31
USP22-208ENST00000578446 LPIN2Q92539 896 aa13.13□□□□□ -0.31
USP22-208ENST00000578446 TAOK3Q9H2K8 898 aa13.13□□□□□ -0.31
USP22-208ENST00000578446 GPR108Q9NPR9 543 aa13.13□□□□□ -0.31
USP22-208ENST00000578446 FPGT-TNNI3KV9GXZ4 949 aa13.13□□□□□ -0.31
USP22-208ENST00000578446 SNED1Q8TER0 1413 aa13.13□□□□□ -0.31
USP22-208ENST00000578446 A0A1B0GUL7 405 aa13.12□□□□□ -0.31
USP22-208ENST00000578446 SNAP23O00161 211 aa13.12□□□□□ -0.31
USP22-208ENST00000578446 FKBP4Q02790 459 aaKnown RBP eCLIP13.12□□□□□ -0.31
USP22-208ENST00000578446 UBE4AQ14139 1066 aa13.12□□□□□ -0.31
USP22-208ENST00000578446 NEUROD6Q96NK8 337 aa13.12□□□□□ -0.31
USP22-208ENST00000578446 PSMD1Q99460 953 aa13.12□□□□□ -0.31
USP22-208ENST00000578446 EYA3Q99504 573 aa13.12□□□□□ -0.31
USP22-208ENST00000578446 POLLQ9UGP5 575 aa13.12□□□□□ -0.31
USP22-208ENST00000578446 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.12□□□□□ -0.31
USP22-208ENST00000578446 DUOX1Q9NRD9 1551 aa13.11□□□□□ -0.31
USP22-208ENST00000578446 IFIT2P09913 472 aaKnown RBP13.11□□□□□ -0.31
USP22-208ENST00000578446 FGFR2P21802 821 aa13.11□□□□□ -0.31
USP22-208ENST00000578446 NUCB1Q02818 461 aa13.11□□□□□ -0.31
USP22-208ENST00000578446 GORABQ5T7V8 394 aa13.11□□□□□ -0.31
USP22-208ENST00000578446 ARHGAP27Q6ZUM4 889 aa13.11□□□□□ -0.31
USP22-208ENST00000578446 CHD1LQ86WJ1 897 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms