RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 ZKSCAN3Q9BRR0 538 aa13.9□□□□□ -0.18
ERBB2-206ENST00000578373 ZBTB43O43298 467 aa13.89□□□□□ -0.19
ERBB2-206ENST00000578373 NBPF6Q5VWK0 638 aa13.89□□□□□ -0.19
ERBB2-206ENST00000578373 NBPF4Q96M43 638 aa13.89□□□□□ -0.19
ERBB2-206ENST00000578373 PLA2R1Q13018 1463 aa13.89□□□□□ -0.19
ERBB2-206ENST00000578373 MFSD6Q6ZSS7 791 aa13.89□□□□□ -0.19
ERBB2-206ENST00000578373 TRMT1LQ7Z2T5 733 aaKnown RBP13.89□□□□□ -0.19
ERBB2-206ENST00000578373 RAD50Q92878 1312 aa13.89□□□□□ -0.19
ERBB2-206ENST00000578373 CEP170Q5SW79 1584 aa13.89□□□□□ -0.19
ERBB2-206ENST00000578373 IBSPP21815 317 aaPredicted RBP13.89□□□□□ -0.19
ERBB2-206ENST00000578373 HS1BP3Q53T59 392 aa13.89□□□□□ -0.19
ERBB2-206ENST00000578373 IQCA1Q86XH1 822 aa13.89□□□□□ -0.19
ERBB2-206ENST00000578373 DHX32Q7L7V1 743 aaKnown RBP13.89□□□□□ -0.19
ERBB2-206ENST00000578373 SEC62Q99442 399 aaKnown RBP13.89□□□□□ -0.19
ERBB2-206ENST00000578373 NSFL1CQ9UNZ2 370 aaKnown RBP13.89□□□□□ -0.19
ERBB2-206ENST00000578373 ERVK-7P63135 1459 aa13.89□□□□□ -0.19
ERBB2-206ENST00000578373 CCDC196A0A1B0GTZ2 297 aa13.88□□□□□ -0.19
ERBB2-206ENST00000578373 ME3Q16798 604 aa13.88□□□□□ -0.19
ERBB2-206ENST00000578373 JAKMIP3Q5VZ66 844 aa13.88□□□□□ -0.19
ERBB2-206ENST00000578373 SYT10Q6XYQ8 523 aa13.88□□□□□ -0.19
ERBB2-206ENST00000578373 MIGA1Q8NAN2 632 aa13.88□□□□□ -0.19
ERBB2-206ENST00000578373 FAM89AQ96GI7 184 aa13.88□□□□□ -0.19
ERBB2-206ENST00000578373 ORAI2Q96SN7 254 aa13.88□□□□□ -0.19
ERBB2-206ENST00000578373 RIOK3O14730 519 aaKnown RBP13.88□□□□□ -0.19
ERBB2-206ENST00000578373 RNMTO43148 476 aaKnown RBP13.88□□□□□ -0.19
ERBB2-206ENST00000578373 MATR3P43243 847 aaKnown RBP eCLIP13.88□□□□□ -0.19
ERBB2-206ENST00000578373 CEP131Q9UPN4 1083 aa13.88□□□□□ -0.19
ERBB2-206ENST00000578373 ZFYVE9O95405 1425 aa13.88□□□□□ -0.19
ERBB2-206ENST00000578373 POGZQ7Z3K3 1410 aa13.88□□□□□ -0.19
ERBB2-206ENST00000578373 NEMFO60524 1076 aa13.88□□□□□ -0.19
ERBB2-206ENST00000578373 IDEP14735 1019 aa13.88□□□□□ -0.19
ERBB2-206ENST00000578373 HSPA4P34932 840 aa13.88□□□□□ -0.19
ERBB2-206ENST00000578373 SPECC1Q5M775 1068 aa13.88□□□□□ -0.19
ERBB2-206ENST00000578373 ZSCAN29Q8IWY8 852 aaPredicted RBP13.88□□□□□ -0.19
ERBB2-206ENST00000578373 KLHL34Q8N239 644 aa13.88□□□□□ -0.19
ERBB2-206ENST00000578373 LRMPQ12912 555 aa13.87□□□□□ -0.19
ERBB2-206ENST00000578373 KARSQ15046 597 aaKnown RBP13.87□□□□□ -0.19
ERBB2-206ENST00000578373 SEPT11Q9NVA2 429 aaKnown RBP13.87□□□□□ -0.19
ERBB2-206ENST00000578373 FSD2A1L4K1 749 aa13.87□□□□□ -0.19
ERBB2-206ENST00000578373 EIF3JO75822 258 aaKnown RBP13.87□□□□□ -0.19
ERBB2-206ENST00000578373 SLC5A1P13866 664 aa13.87□□□□□ -0.19
ERBB2-206ENST00000578373 MCM6Q14566 821 aa13.87□□□□□ -0.19
ERBB2-206ENST00000578373 JAG2Q9Y219 1238 aa13.87□□□□□ -0.19
ERBB2-206ENST00000578373 A0A087WWV3 80 aa13.87□□□□□ -0.19
ERBB2-206ENST00000578373 N4BP3O15049 544 aa13.87□□□□□ -0.19
ERBB2-206ENST00000578373 U2AF2P26368 475 aaKnown RBP eCLIP13.87□□□□□ -0.191e-6■□□□□ 10.6
ERBB2-206ENST00000578373 RBM5P52756 815 aaKnown RBP eCLIP13.87□□□□□ -0.199e-8■■■□□ 16.8
ERBB2-206ENST00000578373 CBX8Q9HC52 389 aa13.87□□□□□ -0.19
ERBB2-206ENST00000578373 DDX21Q9NR30 783 aaKnown RBP eCLIP13.87□□□□□ -0.19
ERBB2-206ENST00000578373 BCORL1Q5H9F3 1711 aa13.87□□□□□ -0.19
ERBB2-206ENST00000578373 MAST1Q9Y2H9 1570 aa13.87□□□□□ -0.19
ERBB2-206ENST00000578373 RPS6KB1P23443 525 aa13.86□□□□□ -0.19
ERBB2-206ENST00000578373 ADCK5Q3MIX3 580 aa13.86□□□□□ -0.19
ERBB2-206ENST00000578373 CAVIN4Q5BKX8 364 aa13.86□□□□□ -0.19
ERBB2-206ENST00000578373 IL15P40933 162 aaPredicted RBP13.86□□□□□ -0.19
ERBB2-206ENST00000578373 PIP4K2BP78356 416 aa13.86□□□□□ -0.19
ERBB2-206ENST00000578373 EAF2Q96CJ1 260 aaPredicted RBP13.86□□□□□ -0.19
ERBB2-206ENST00000578373 PAXBP1Q9Y5B6 917 aa13.86□□□□□ -0.19
ERBB2-206ENST00000578373 KCNG4Q8TDN1 519 aa13.86□□□□□ -0.19
ERBB2-206ENST00000578373 LEO1Q8WVC0 666 aaPredicted RBP13.86□□□□□ -0.19
ERBB2-206ENST00000578373 DDX17Q92841 729 aaKnown RBP13.86□□□□□ -0.19
ERBB2-206ENST00000578373 CRACR2AQ9BSW2 395 aa13.86□□□□□ -0.19
ERBB2-206ENST00000578373 STX8Q9UNK0 236 aa13.86□□□□□ -0.19
ERBB2-206ENST00000578373 DHX58Q96C10 678 aa13.85□□□□□ -0.19
ERBB2-206ENST00000578373 CCDC194A0A1B0GVG4 234 aa13.85□□□□□ -0.19
ERBB2-206ENST00000578373 A1BGP04217 495 aa13.85□□□□□ -0.19
ERBB2-206ENST00000578373 MYL10Q9BUA6 226 aa13.85□□□□□ -0.19
ERBB2-206ENST00000578373 A0A0D9SFI3 127 aa13.85□□□□□ -0.19
ERBB2-206ENST00000578373 LMAN1P49257 510 aa13.85□□□□□ -0.19
ERBB2-206ENST00000578373 WTAPQ15007 396 aa13.85□□□□□ -0.19
ERBB2-206ENST00000578373 CATIPQ7Z7H3 387 aa13.85□□□□□ -0.19
ERBB2-206ENST00000578373 DZIP1Q86YF9 867 aaKnown RBP13.85□□□□□ -0.19
ERBB2-206ENST00000578373 ATP10AO60312 1499 aa13.85□□□□□ -0.19
ERBB2-206ENST00000578373 LZTFL1Q9NQ48 299 aa13.85□□□□□ -0.19
ERBB2-206ENST00000578373 ANKIB1Q9P2G1 1089 aa13.85□□□□□ -0.19
ERBB2-206ENST00000578373 DRC1Q96MC2 740 aa13.84□□□□□ -0.19
ERBB2-206ENST00000578373 UTP14AQ9BVJ6 771 aaKnown RBP13.84□□□□□ -0.19
ERBB2-206ENST00000578373 TSPY2A6NKD2 308 aa13.84□□□□□ -0.19
ERBB2-206ENST00000578373 CAVIN2O95810 425 aa13.84□□□□□ -0.19
ERBB2-206ENST00000578373 ZNF790Q6PG37 636 aa13.84□□□□□ -0.19
ERBB2-206ENST00000578373 IP6K1Q92551 441 aa13.84□□□□□ -0.19
ERBB2-206ENST00000578373 ACSBG1Q96GR2 724 aa13.84□□□□□ -0.19
ERBB2-206ENST00000578373 UBA5Q9GZZ9 404 aa13.84□□□□□ -0.19
ERBB2-206ENST00000578373 SLC4A4Q9Y6R1 1079 aa13.84□□□□□ -0.19
ERBB2-206ENST00000578373 A0A1B0GUL7 405 aa13.84□□□□□ -0.19
ERBB2-206ENST00000578373 RNF113AO15541 343 aaKnown RBP13.84□□□□□ -0.19
ERBB2-206ENST00000578373 PHACTR2O75167 634 aa13.84□□□□□ -0.19
ERBB2-206ENST00000578373 ZCRB1Q8TBF4 217 aaKnown RBP13.84□□□□□ -0.19
ERBB2-206ENST00000578373 FBXO3Q9UK99 471 aa13.84□□□□□ -0.19
ERBB2-206ENST00000578373 MPHOSPH10O00566 681 aaKnown RBP13.83□□□□□ -0.19
ERBB2-206ENST00000578373 CYP7A1P22680 504 aa13.83□□□□□ -0.19
ERBB2-206ENST00000578373 UBA7P41226 1012 aa13.83□□□□□ -0.19
ERBB2-206ENST00000578373 TDRD12Q587J7 1177 aaKnown RBP13.83□□□□□ -0.19
ERBB2-206ENST00000578373 TNNI3KQ59H18 835 aa13.83□□□□□ -0.19
ERBB2-206ENST00000578373 ODF2Q5BJF6 829 aa13.83□□□□□ -0.19
ERBB2-206ENST00000578373 GTF3C6Q969F1 213 aa13.83□□□□□ -0.19
ERBB2-206ENST00000578373 ZNF496Q96IT1 587 aaPredicted RBP13.83□□□□□ -0.19
ERBB2-206ENST00000578373 PLIN2Q99541 437 aa13.83□□□□□ -0.19
ERBB2-206ENST00000578373 FPGT-TNNI3KV9GXZ4 949 aa13.83□□□□□ -0.19
ERBB2-206ENST00000578373 TPCN1Q9ULQ1 816 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms