RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 GPRC5DQ9NZD1 345 aa29.2■■■□□ 2.26
VAPA-205ENST00000578314 GGA1Q9UJY5 639 aa29.2■■■□□ 2.26
VAPA-205ENST00000578314 CLEC11AQ9Y240 323 aa29.2■■■□□ 2.26
VAPA-205ENST00000578314 PASKQ96RG2 1323 aa29.2■■■□□ 2.26
VAPA-205ENST00000578314 ITGBL1O95965 494 aaPredicted RBP29.19■■■□□ 2.26
VAPA-205ENST00000578314 MRPL50Q8N5N7 158 aaKnown RBP29.19■■■□□ 2.26
VAPA-205ENST00000578314 CDCA7LQ96GN5 454 aa29.19■■■□□ 2.26
VAPA-205ENST00000578314 ZC3H12CQ9C0D7 883 aaKnown RBP29.19■■■□□ 2.26
VAPA-205ENST00000578314 GMPSP49915 693 aaPredicted RBP29.18■■■□□ 2.26
VAPA-205ENST00000578314 USP50Q70EL3 339 aaPredicted RBP29.18■■■□□ 2.26
VAPA-205ENST00000578314 DBNDD1Q9H9R9 158 aa29.18■■■□□ 2.26
VAPA-205ENST00000578314 XDHP47989 1333 aa29.18■■■□□ 2.26
VAPA-205ENST00000578314 LTBP1Q14766 1721 aa29.17■■■□□ 2.26
VAPA-205ENST00000578314 UFL1O94874 794 aa29.17■■■□□ 2.26
VAPA-205ENST00000578314 GPR101Q96P66 508 aaPredicted RBP29.17■■■□□ 2.26
VAPA-205ENST00000578314 MINPP1Q9UNW1 487 aa29.17■■■□□ 2.26
VAPA-205ENST00000578314 ALDH1L1O75891 902 aa29.16■■■□□ 2.26
VAPA-205ENST00000578314 ADARB2Q9NS39 739 aaKnown RBP29.16■■■□□ 2.26
VAPA-205ENST00000578314 ECE2O60344 883 aa29.15■■■□□ 2.26
VAPA-205ENST00000578314 ITGA6P23229 1130 aa29.15■■■□□ 2.26
VAPA-205ENST00000578314 ATP2B4P23634 1241 aa29.15■■■□□ 2.26
VAPA-205ENST00000578314 DOK7Q18PE1 504 aa29.15■■■□□ 2.26
VAPA-205ENST00000578314 FOXO4P98177 505 aa29.14■■■□□ 2.26
VAPA-205ENST00000578314 MAP1SQ66K74 1059 aaPredicted RBP29.14■■■□□ 2.26
VAPA-205ENST00000578314 CNTROBQ8N137 903 aa29.14■■■□□ 2.26
VAPA-205ENST00000578314 SSH1Q8WYL5 1049 aa29.14■■■□□ 2.26
VAPA-205ENST00000578314 SRCIN1Q9C0H9 1055 aa29.14■■■□□ 2.26
VAPA-205ENST00000578314 GRM8O00222 908 aa29.13■■■□□ 2.25
VAPA-205ENST00000578314 IGHMBP2P38935 993 aaKnown RBP29.13■■■□□ 2.25
VAPA-205ENST00000578314 FAM161AQ3B820 660 aa29.13■■■□□ 2.25
VAPA-205ENST00000578314 SLC4A10Q6U841 1118 aa29.13■■■□□ 2.25
VAPA-205ENST00000578314 BCL2L13Q9BXK5 485 aa29.13■■■□□ 2.25
VAPA-205ENST00000578314 PSMD14O00487 310 aa29.12■■■□□ 2.25
VAPA-205ENST00000578314 DPF2Q92785 391 aa29.12■■■□□ 2.25
VAPA-205ENST00000578314 KCNQ5Q9NR82 932 aa29.11■■■□□ 2.25
VAPA-205ENST00000578314 PTPRCP08575 1304 aa29.11■■■□□ 2.25
VAPA-205ENST00000578314 ALDH1L2Q3SY69 923 aa29.1■■■□□ 2.25
VAPA-205ENST00000578314 DIEXFQ68CQ4 756 aaKnown RBP29.1■■■□□ 2.25
VAPA-205ENST00000578314 C9orf78Q9NZ63 289 aaPredicted RBP29.1■■■□□ 2.25
VAPA-205ENST00000578314 MKRN1Q9UHC7 482 aaKnown RBP29.1■■■□□ 2.25
VAPA-205ENST00000578314 CNOT7Q9UIV1 285 aaKnown RBP29.1■■■□□ 2.25
VAPA-205ENST00000578314 ZBTB12Q9Y330 459 aaPredicted RBP29.09■■■□□ 2.25
VAPA-205ENST00000578314 ANKRD18BA2A2Z9 1011 aa29.08■■■□□ 2.25
VAPA-205ENST00000578314 WTIPA6NIX2 430 aaPredicted RBP29.08■■■□□ 2.25
VAPA-205ENST00000578314 TMEM88BA6NKF7 163 aa29.08■■■□□ 2.25
VAPA-205ENST00000578314 G3V3G9 751 aa29.08■■■□□ 2.25
VAPA-205ENST00000578314 CT47B1P0C2W7 299 aaPredicted RBP29.08■■■□□ 2.25
VAPA-205ENST00000578314 RPS12P25398 132 aaKnown RBP29.08■■■□□ 2.25
VAPA-205ENST00000578314 CCT4P50991 539 aaKnown RBP29.08■■■□□ 2.25
VAPA-205ENST00000578314 DCAF8Q5TAQ9 597 aa29.08■■■□□ 2.25
VAPA-205ENST00000578314 MPHOSPH8Q99549 860 aa29.08■■■□□ 2.25
VAPA-205ENST00000578314 MYH3P11055 1940 aa29.08■■■□□ 2.25
VAPA-205ENST00000578314 VIL1P09327 827 aaKnown RBP29.07■■■□□ 2.24
VAPA-205ENST00000578314 CNTNAP1P78357 1384 aa29.07■■■□□ 2.24
VAPA-205ENST00000578314 EPHA10Q5JZY3 1008 aa29.07■■■□□ 2.24
VAPA-205ENST00000578314 LMBR1LQ6UX01 489 aa29.07■■■□□ 2.24
VAPA-205ENST00000578314 MIER1Q8N108 512 aa29.07■■■□□ 2.24
VAPA-205ENST00000578314 ANKRD2Q9GZV1 360 aa29.07■■■□□ 2.24
VAPA-205ENST00000578314 PGAP2Q9UHJ9 254 aa29.07■■■□□ 2.24
VAPA-205ENST00000578314 LEMD3Q9Y2U8 911 aa29.07■■■□□ 2.24
VAPA-205ENST00000578314 H7C1D1 291 aa29.06■■■□□ 2.24
VAPA-205ENST00000578314 IFIT5Q13325 482 aaKnown RBP29.06■■■□□ 2.24
VAPA-205ENST00000578314 MICALL2Q8IY33 904 aa29.06■■■□□ 2.24
VAPA-205ENST00000578314 MED23Q9ULK4 1368 aa29.05■■■□□ 2.24
VAPA-205ENST00000578314 UTYO14607 1347 aa29.05■■■□□ 2.24
VAPA-205ENST00000578314 HSPA1AP0DMV8 641 aaKnown RBP29.05■■■□□ 2.24
VAPA-205ENST00000578314 HSPA1BP0DMV9 641 aaKnown RBP29.05■■■□□ 2.24
VAPA-205ENST00000578314 HIRAP54198 1017 aaPredicted RBP29.05■■■□□ 2.24
VAPA-205ENST00000578314 PODNQ7Z5L7 613 aa29.05■■■□□ 2.24
VAPA-205ENST00000578314 ZC3H15Q8WU90 426 aaKnown RBP29.05■■■□□ 2.24
VAPA-205ENST00000578314 SHTN1A0MZ66 631 aa29.04■■■□□ 2.24
VAPA-205ENST00000578314 NBPF7P0C2Y1 421 aaPredicted RBP29.03■■■□□ 2.24
VAPA-205ENST00000578314 TRPM4Q8TD43 1214 aa29.03■■■□□ 2.24
VAPA-205ENST00000578314 CHMP3Q9Y3E7 222 aa29.03■■■□□ 2.24
VAPA-205ENST00000578314 CHRNDQ07001 517 aa29.02■■■□□ 2.24
VAPA-205ENST00000578314 KAZALD1Q96I82 304 aa29.02■■■□□ 2.24
VAPA-205ENST00000578314 SMC4Q9NTJ3 1288 aa29.02■■■□□ 2.24
VAPA-205ENST00000578314 ZNF804BA4D1E1 1349 aa29.01■■■□□ 2.23
VAPA-205ENST00000578314 CCDC57Q2TAC2 916 aa29.01■■■□□ 2.23
VAPA-205ENST00000578314 COL13A1Q5TAT6 717 aaPredicted RBP29.01■■■□□ 2.23
VAPA-205ENST00000578314 SUCLG2Q96I99 432 aa29.01■■■□□ 2.23
VAPA-205ENST00000578314 BRPF1P55201 1214 aaPredicted RBP29■■■□□ 2.23
VAPA-205ENST00000578314 RSBN1LQ6PCB5 846 aaPredicted RBP28.99■■■□□ 2.23
VAPA-205ENST00000578314 SAMD7Q7Z3H4 446 aa28.99■■■□□ 2.23
VAPA-205ENST00000578314 TXNRD3Q86VQ6 643 aa28.99■■■□□ 2.23
VAPA-205ENST00000578314 AGBL3Q8NEM8 1001 aa28.99■■■□□ 2.23
VAPA-205ENST00000578314 COA1Q9GZY4 146 aa28.99■■■□□ 2.23
VAPA-205ENST00000578314 ZNF609O15014 1411 aa28.98■■■□□ 2.23
VAPA-205ENST00000578314 USP17L3A6NCW0 530 aa28.98■■■□□ 2.23
VAPA-205ENST00000578314 USP17L4A6NCW7 530 aa28.98■■■□□ 2.23
VAPA-205ENST00000578314 USP17L1Q7RTZ2 530 aa28.98■■■□□ 2.23
VAPA-205ENST00000578314 VEGFBP49765 207 aa28.97■■■□□ 2.23
VAPA-205ENST00000578314 FMR1Q06787 632 aaKnown RBP eCLIP28.97■■■□□ 2.23
VAPA-205ENST00000578314 GMLQ99445 158 aa28.97■■■□□ 2.23
VAPA-205ENST00000578314 TRAF5O00463 557 aa28.96■■■□□ 2.23
VAPA-205ENST00000578314 RABL6Q3YEC7 729 aaPredicted RBP28.96■■■□□ 2.23
VAPA-205ENST00000578314 LDHAL6AQ6ZMR3 332 aa28.96■■■□□ 2.23
VAPA-205ENST00000578314 ZNF594Q96JF6 807 aaPredicted RBP28.96■■■□□ 2.23
VAPA-205ENST00000578314 USP44Q9H0E7 712 aa28.96■■■□□ 2.23
VAPA-205ENST00000578314 SCN9AQ15858 1988 aa28.95■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms