RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 FRAT1Q92837 279 aaPredicted RBP27.95■■■□□ 2.06
SMARCD2-206ENST00000577990 USP44Q9H0E7 712 aa27.95■■■□□ 2.06
SMARCD2-206ENST00000577990 BSDC1Q9NW68 430 aaPredicted RBP27.95■■■□□ 2.06
SMARCD2-206ENST00000577990 ANKRD18BA2A2Z9 1011 aa27.94■■■□□ 2.06
SMARCD2-206ENST00000577990 FZD9O00144 591 aa27.94■■■□□ 2.06
SMARCD2-206ENST00000577990 PODXL2Q9NZ53 605 aa27.94■■■□□ 2.06
SMARCD2-206ENST00000577990 KIAA2012Q0VF49 1180 aa27.93■■■□□ 2.06
SMARCD2-206ENST00000577990 IFIT5Q13325 482 aaKnown RBP27.93■■■□□ 2.06
SMARCD2-206ENST00000577990 ATF7IPQ6VMQ6 1270 aa27.93■■■□□ 2.06
SMARCD2-206ENST00000577990 NIM1KQ8IY84 436 aa27.93■■■□□ 2.06
SMARCD2-206ENST00000577990 KAZALD1Q96I82 304 aa27.93■■■□□ 2.06
SMARCD2-206ENST00000577990 ANKIB1Q9P2G1 1089 aa27.93■■■□□ 2.06
SMARCD2-206ENST00000577990 POLLQ9UGP5 575 aa27.93■■■□□ 2.06
SMARCD2-206ENST00000577990 C6orf229H3BNL8 230 aa27.92■■■□□ 2.06
SMARCD2-206ENST00000577990 TRIM27P14373 513 aa27.92■■■□□ 2.06
SMARCD2-206ENST00000577990 TBC1D16Q8TBP0 767 aa27.92■■■□□ 2.06
SMARCD2-206ENST00000577990 L3MBTL3Q96JM7 780 aaPredicted RBP27.91■■■□□ 2.06
SMARCD2-206ENST00000577990 MPHOSPH8Q99549 860 aa27.91■■■□□ 2.06
SMARCD2-206ENST00000577990 GGA1Q9UJY5 639 aa27.91■■■□□ 2.06
SMARCD2-206ENST00000577990 XDHP47989 1333 aa27.91■■■□□ 2.06
SMARCD2-206ENST00000577990 PCNTO95613 3336 aa27.9■■■□□ 2.06
SMARCD2-206ENST00000577990 UFL1O94874 794 aa27.9■■■□□ 2.06
SMARCD2-206ENST00000577990 ZKSCAN2Q63HK3 967 aa27.9■■■□□ 2.06
SMARCD2-206ENST00000577990 INTS3Q68E01 1043 aaKnown RBP27.9■■■□□ 2.06
SMARCD2-206ENST00000577990 EYA3Q99504 573 aa27.9■■■□□ 2.06
SMARCD2-206ENST00000577990 BICC1Q9H694 974 aaKnown RBP27.9■■■□□ 2.06
SMARCD2-206ENST00000577990 MINPP1Q9UNW1 487 aa27.9■■■□□ 2.06
SMARCD2-206ENST00000577990 EIF6P56537 245 aaKnown RBP27.89■■■□□ 2.06
SMARCD2-206ENST00000577990 WASHC4Q2M389 1173 aa27.89■■■□□ 2.06
SMARCD2-206ENST00000577990 CCDC57Q2TAC2 916 aa27.89■■■□□ 2.06
SMARCD2-206ENST00000577990 RABL6Q3YEC7 729 aaPredicted RBP27.89■■■□□ 2.06
SMARCD2-206ENST00000577990 IQCA1LA6NCM1 817 aa27.88■■■□□ 2.05
SMARCD2-206ENST00000577990 ANKRD44Q8N8A2 993 aa27.88■■■□□ 2.05
SMARCD2-206ENST00000577990 TAF1DQ9H5J8 278 aaPredicted RBP27.88■■■□□ 2.05
SMARCD2-206ENST00000577990 TNNQ9UQP3 1299 aa27.88■■■□□ 2.05
SMARCD2-206ENST00000577990 TAF7LQ5H9L4 462 aa27.87■■■□□ 2.05
SMARCD2-206ENST00000577990 GPR101Q96P66 508 aaPredicted RBP27.87■■■□□ 2.05
SMARCD2-206ENST00000577990 RIMBP2O15034 1052 aa27.86■■■□□ 2.05
SMARCD2-206ENST00000577990 UBTFL1P0CB47 393 aaPredicted RBP27.86■■■□□ 2.05
SMARCD2-206ENST00000577990 ATP2B4P23634 1241 aa27.86■■■□□ 2.05
SMARCD2-206ENST00000577990 CHADLQ6NUI6 762 aa27.86■■■□□ 2.05
SMARCD2-206ENST00000577990 ZNRF3Q9ULT6 936 aa27.86■■■□□ 2.05
SMARCD2-206ENST00000577990 CLUAP1Q96AJ1 413 aa27.85■■■□□ 2.05
SMARCD2-206ENST00000577990 KLRG1Q96E93 195 aa27.85■■■□□ 2.05
SMARCD2-206ENST00000577990 GJA3Q9Y6H8 435 aa27.85■■■□□ 2.05
SMARCD2-206ENST00000577990 ADAMTSL1Q8N6G6 1762 aa27.84■■■□□ 2.05
SMARCD2-206ENST00000577990 EAPPQ56P03 285 aaPredicted RBP27.84■■■□□ 2.05
SMARCD2-206ENST00000577990 GPC2Q8N158 579 aa27.84■■■□□ 2.05
SMARCD2-206ENST00000577990 ZNF594Q96JF6 807 aaPredicted RBP27.84■■■□□ 2.05
SMARCD2-206ENST00000577990 ANKRD2Q9GZV1 360 aa27.84■■■□□ 2.05
SMARCD2-206ENST00000577990 HACL1Q9UJ83 578 aa27.84■■■□□ 2.05
SMARCD2-206ENST00000577990 MEIS3Q99687 375 aa27.83■■■□□ 2.05
SMARCD2-206ENST00000577990 ZC3H12CQ9C0D7 883 aaKnown RBP27.83■■■□□ 2.05
SMARCD2-206ENST00000577990 CHRNDQ07001 517 aa27.82■■■□□ 2.04
SMARCD2-206ENST00000577990 HDAC5Q9UQL6 1122 aa27.82■■■□□ 2.04
SMARCD2-206ENST00000577990 EPHX2P34913 555 aa27.81■■■□□ 2.04
SMARCD2-206ENST00000577990 LDHAL6AQ6ZMR3 332 aa27.81■■■□□ 2.04
SMARCD2-206ENST00000577990 LDHDQ86WU2 507 aa27.81■■■□□ 2.04
SMARCD2-206ENST00000577990 DBNDD1Q9H9R9 158 aa27.81■■■□□ 2.04
SMARCD2-206ENST00000577990 LEMD3Q9Y2U8 911 aa27.81■■■□□ 2.04
SMARCD2-206ENST00000577990 A0A1B0GUL6 1792 aa27.81■■■□□ 2.04
SMARCD2-206ENST00000577990 YDJCA8MPS7 323 aa27.8■■■□□ 2.04
SMARCD2-206ENST00000577990 CXCL9Q07325 125 aa27.8■■■□□ 2.04
SMARCD2-206ENST00000577990 FTSJ3Q8IY81 847 aaKnown RBP27.8■■■□□ 2.04
SMARCD2-206ENST00000577990 TMEM57Q8N5G2 664 aa27.8■■■□□ 2.04
SMARCD2-206ENST00000577990 CNNM1Q9NRU3 951 aa27.8■■■□□ 2.04
SMARCD2-206ENST00000577990 MED23Q9ULK4 1368 aa27.79■■■□□ 2.04
SMARCD2-206ENST00000577990 ECE2O60344 883 aa27.79■■■□□ 2.04
SMARCD2-206ENST00000577990 GNAI3P08754 354 aa27.79■■■□□ 2.04
SMARCD2-206ENST00000577990 DOK7Q18PE1 504 aa27.79■■■□□ 2.04
SMARCD2-206ENST00000577990 CIAPIN1Q6FI81 312 aa27.79■■■□□ 2.04
SMARCD2-206ENST00000577990 LRRFIP2Q9Y608 721 aaKnown RBP27.79■■■□□ 2.04
SMARCD2-206ENST00000577990 WTIPA6NIX2 430 aaPredicted RBP27.78■■■□□ 2.04
SMARCD2-206ENST00000577990 DZIP1LQ8IYY4 767 aaKnown RBP27.78■■■□□ 2.04
SMARCD2-206ENST00000577990 YTHDC1Q96MU7 727 aaKnown RBP27.78■■■□□ 2.04
SMARCD2-206ENST00000577990 RCAN3Q9UKA8 241 aa27.78■■■□□ 2.04
SMARCD2-206ENST00000577990 CLEC11AQ9Y240 323 aa27.78■■■□□ 2.04
SMARCD2-206ENST00000577990 ZNF804BA4D1E1 1349 aa27.77■■■□□ 2.04
SMARCD2-206ENST00000577990 G3V3G9 751 aa27.77■■■□□ 2.04
SMARCD2-206ENST00000577990 RAD17O75943 681 aa27.77■■■□□ 2.04
SMARCD2-206ENST00000577990 DCAF8Q5TAQ9 597 aa27.77■■■□□ 2.04
SMARCD2-206ENST00000577990 KCNJ4P48050 445 aa27.76■■■□□ 2.03
SMARCD2-206ENST00000577990 TNIP1Q15025 636 aa27.76■■■□□ 2.03
SMARCD2-206ENST00000577990 HELBQ8NG08 1087 aaPredicted RBP27.76■■■□□ 2.03
SMARCD2-206ENST00000577990 TAF5LO75529 589 aa27.75■■■□□ 2.03
SMARCD2-206ENST00000577990 SCNN1DP51172 638 aa27.75■■■□□ 2.03
SMARCD2-206ENST00000577990 PUS3Q9BZE2 481 aaKnown RBP27.75■■■□□ 2.03
SMARCD2-206ENST00000577990 RLBP1P12271 317 aa27.74■■■□□ 2.03
SMARCD2-206ENST00000577990 JMYQ8N9B5 988 aa27.74■■■□□ 2.03
SMARCD2-206ENST00000577990 LMOD1P29536 600 aaPredicted RBP27.73■■■□□ 2.03
SMARCD2-206ENST00000577990 EPS15P42566 896 aa27.73■■■□□ 2.03
SMARCD2-206ENST00000577990 RFX5P48382 616 aaPredicted RBP27.73■■■□□ 2.03
SMARCD2-206ENST00000577990 PNMA8AQ86V59 439 aaPredicted RBP27.73■■■□□ 2.03
SMARCD2-206ENST00000577990 KLHDC4Q8TBB5 520 aa27.73■■■□□ 2.03
SMARCD2-206ENST00000577990 RIPOR2Q9Y4F9 1068 aa27.73■■■□□ 2.03
SMARCD2-206ENST00000577990 SCN9AQ15858 1988 aa27.73■■■□□ 2.03
SMARCD2-206ENST00000577990 PASKQ96RG2 1323 aa27.72■■■□□ 2.03
SMARCD2-206ENST00000577990 MAP1SQ66K74 1059 aaPredicted RBP27.72■■■□□ 2.03
SMARCD2-206ENST00000577990 ITPRIPQ8IWB1 547 aa27.72■■■□□ 2.03
SMARCD2-206ENST00000577990 MROH5Q6ZUA9 1318 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms