RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 LEMD3Q9Y2U8 911 aa6.57□□□□□ -1.36
TOP2A-202ENST00000577541 M0R2N6 131 aa6.56□□□□□ -1.36
TOP2A-202ENST00000577541 GHRHP01286 108 aa6.56□□□□□ -1.36
TOP2A-202ENST00000577541 KIAA1211Q6ZU35 1233 aa6.56□□□□□ -1.36
TOP2A-202ENST00000577541 VSIG10LQ86VR7 867 aa6.56□□□□□ -1.36
TOP2A-202ENST00000577541 NFATC2IPQ8NCF5 419 aa6.56□□□□□ -1.36
TOP2A-202ENST00000577541 GIMAP7Q8NHV1 300 aa6.56□□□□□ -1.36
TOP2A-202ENST00000577541 RBSNQ9H1K0 784 aa6.56□□□□□ -1.36
TOP2A-202ENST00000577541 TRIM33Q9UPN9 1127 aa6.56□□□□□ -1.36
TOP2A-202ENST00000577541 ABL2P42684 1182 aa6.55□□□□□ -1.36
TOP2A-202ENST00000577541 IDH3AP50213 366 aa6.55□□□□□ -1.36
TOP2A-202ENST00000577541 RTN1Q16799 776 aa6.55□□□□□ -1.36
TOP2A-202ENST00000577541 MFSD14AQ96MC6 490 aa6.55□□□□□ -1.36
TOP2A-202ENST00000577541 ATG3Q9NT62 314 aa6.55□□□□□ -1.36
TOP2A-202ENST00000577541 ATAD2Q6PL18 1390 aa6.55□□□□□ -1.36
TOP2A-202ENST00000577541 LINC01387J3KSC0 135 aa6.54□□□□□ -1.36
TOP2A-202ENST00000577541 SART1O43290 800 aaKnown RBP6.54□□□□□ -1.36
TOP2A-202ENST00000577541 DKK1O94907 266 aa6.54□□□□□ -1.36
TOP2A-202ENST00000577541 FOSL1P15407 271 aa6.54□□□□□ -1.36
TOP2A-202ENST00000577541 PKN1Q16512 942 aa6.54□□□□□ -1.36
TOP2A-202ENST00000577541 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.54□□□□□ -1.36
TOP2A-202ENST00000577541 GAS2L2Q8NHY3 880 aa6.54□□□□□ -1.36
TOP2A-202ENST00000577541 ZNF865P0CJ78 1059 aaPredicted RBP6.53□□□□□ -1.36
TOP2A-202ENST00000577541 ATP1A2P50993 1020 aa6.53□□□□□ -1.36
TOP2A-202ENST00000577541 DUOXA2Q1HG44 320 aa6.53□□□□□ -1.36
TOP2A-202ENST00000577541 KRTAP19-4Q3LI73 84 aa6.53□□□□□ -1.36
TOP2A-202ENST00000577541 TXNDC11Q6PKC3 985 aa6.53□□□□□ -1.36
TOP2A-202ENST00000577541 ADAMTSL4Q6UY14 1074 aa6.53□□□□□ -1.36
TOP2A-202ENST00000577541 SHISA5Q8N114 240 aa6.53□□□□□ -1.36
TOP2A-202ENST00000577541 USP20Q9Y2K6 914 aa6.53□□□□□ -1.36
TOP2A-202ENST00000577541 USP17L5A8MUK1 530 aa6.52□□□□□ -1.37
TOP2A-202ENST00000577541 FARP2O94887 1054 aaPredicted RBP6.52□□□□□ -1.37
TOP2A-202ENST00000577541 PAPLNO95428 1278 aa6.52□□□□□ -1.37
TOP2A-202ENST00000577541 ARSDP51689 593 aa6.52□□□□□ -1.37
TOP2A-202ENST00000577541 AGBL5Q8NDL9 886 aa6.52□□□□□ -1.37
TOP2A-202ENST00000577541 CHMP7Q8WUX9 453 aaPredicted RBP6.52□□□□□ -1.37
TOP2A-202ENST00000577541 KLK14Q9P0G3 267 aa6.52□□□□□ -1.37
TOP2A-202ENST00000577541 HIF3AQ9Y2N7 669 aa6.52□□□□□ -1.37
TOP2A-202ENST00000577541 PSAPP07602 524 aa6.51□□□□□ -1.37
TOP2A-202ENST00000577541 CPSF6Q16630 551 aaKnown RBP eCLIP6.51□□□□□ -1.37
TOP2A-202ENST00000577541 SCG3Q8WXD2 468 aaKnown RBP6.51□□□□□ -1.37
TOP2A-202ENST00000577541 NSUN5Q96P11 429 aaKnown RBP6.51□□□□□ -1.37
TOP2A-202ENST00000577541 OSBPL1AQ9BXW6 950 aa6.51□□□□□ -1.37
TOP2A-202ENST00000577541 ALG2Q9H553 416 aa6.51□□□□□ -1.37
TOP2A-202ENST00000577541 PRRG2O14669 202 aa6.5□□□□□ -1.37
TOP2A-202ENST00000577541 DDX3YO15523 660 aaKnown RBP6.5□□□□□ -1.37
TOP2A-202ENST00000577541 SLC24A1O60721 1099 aa6.5□□□□□ -1.37
TOP2A-202ENST00000577541 FBXL6Q8N531 539 aa6.5□□□□□ -1.37
TOP2A-202ENST00000577541 BSDC1Q9NW68 430 aaPredicted RBP6.5□□□□□ -1.37
TOP2A-202ENST00000577541 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.5□□□□□ -1.37
TOP2A-202ENST00000577541 NCANO14594 1321 aa6.5□□□□□ -1.37
TOP2A-202ENST00000577541 OPLAHO14841 1288 aa6.49□□□□□ -1.37
TOP2A-202ENST00000577541 MMP20O60882 483 aa6.49□□□□□ -1.37
TOP2A-202ENST00000577541 ADAM11O75078 769 aa6.49□□□□□ -1.37
TOP2A-202ENST00000577541 EGFRP00533 1210 aa6.49□□□□□ -1.37
TOP2A-202ENST00000577541 F13BP05160 661 aa6.49□□□□□ -1.37
TOP2A-202ENST00000577541 PREPP48147 710 aa6.49□□□□□ -1.37
TOP2A-202ENST00000577541 ANKRD34AQ69YU3 496 aa6.49□□□□□ -1.37
TOP2A-202ENST00000577541 FOXD4L4Q8WXT5 416 aaPredicted RBP6.49□□□□□ -1.37
TOP2A-202ENST00000577541 HOXD8P13378 290 aaPredicted RBP6.48□□□□□ -1.37
TOP2A-202ENST00000577541 LILRA6Q6PI73 481 aa6.48□□□□□ -1.37
TOP2A-202ENST00000577541 KSR1Q8IVT5 923 aa6.48□□□□□ -1.37
TOP2A-202ENST00000577541 LARGE2Q8N3Y3 721 aa6.48□□□□□ -1.37
TOP2A-202ENST00000577541 KLHL23Q8NBE8 558 aa6.48□□□□□ -1.37
TOP2A-202ENST00000577541 FLCNQ8NFG4 579 aa6.48□□□□□ -1.37
TOP2A-202ENST00000577541 UBASH3BQ8TF42 649 aa6.48□□□□□ -1.37
TOP2A-202ENST00000577541 CARD10Q9BWT7 1032 aa6.48□□□□□ -1.37
TOP2A-202ENST00000577541 KRTAP9-3Q9BYQ3 159 aa6.48□□□□□ -1.37
TOP2A-202ENST00000577541 CARMIL2Q6F5E8 1435 aa6.48□□□□□ -1.37
TOP2A-202ENST00000577541 PALM3A6NDB9 673 aaPredicted RBP6.47□□□□□ -1.37
TOP2A-202ENST00000577541 BIN1O00499 593 aa6.47□□□□□ -1.37
TOP2A-202ENST00000577541 FSCN2O14926 492 aa6.47□□□□□ -1.37
TOP2A-202ENST00000577541 LGR5O75473 907 aa6.47□□□□□ -1.37
TOP2A-202ENST00000577541 MICAL2O94851 1124 aa6.47□□□□□ -1.37
TOP2A-202ENST00000577541 RASA1P20936 1047 aa6.47□□□□□ -1.37
TOP2A-202ENST00000577541 MAP4P27816 1152 aaKnown RBP6.47□□□□□ -1.37
TOP2A-202ENST00000577541 SOX18P35713 384 aa6.47□□□□□ -1.37
TOP2A-202ENST00000577541 PAK6Q9NQU5 681 aaPredicted RBP6.47□□□□□ -1.37
TOP2A-202ENST00000577541 XYLBO75191 536 aa6.46□□□□□ -1.38
TOP2A-202ENST00000577541 CDC25BP30305 580 aa6.46□□□□□ -1.38
TOP2A-202ENST00000577541 OGFOD1Q8N543 542 aa6.46□□□□□ -1.38
TOP2A-202ENST00000577541 METTL22Q9BUU2 404 aaPredicted RBP6.46□□□□□ -1.38
TOP2A-202ENST00000577541 RTCBQ9Y3I0 505 aaKnown RBP6.46□□□□□ -1.38
TOP2A-202ENST00000577541 RBM19Q9Y4C8 960 aaKnown RBP6.46□□□□□ -1.38
TOP2A-202ENST00000577541 B8ZZF3 427 aa6.45□□□□□ -1.38
TOP2A-202ENST00000577541 CYP26A1O43174 497 aa6.45□□□□□ -1.38
TOP2A-202ENST00000577541 CDC27P30260 824 aa6.45□□□□□ -1.38
TOP2A-202ENST00000577541 FAM117BQ6P1L5 589 aa6.45□□□□□ -1.38
TOP2A-202ENST00000577541 SIX5Q8N196 739 aa6.45□□□□□ -1.38
TOP2A-202ENST00000577541 SLC38A3Q99624 504 aa6.45□□□□□ -1.38
TOP2A-202ENST00000577541 LACRTQ9GZZ8 138 aa6.45□□□□□ -1.38
TOP2A-202ENST00000577541 GAS2O43903 313 aaKnown RBP6.44□□□□□ -1.38
TOP2A-202ENST00000577541 DGKZQ13574 1117 aa6.44□□□□□ -1.38
TOP2A-202ENST00000577541 NEUROD2Q15784 382 aa6.44□□□□□ -1.38
TOP2A-202ENST00000577541 ZNF594Q96JF6 807 aaPredicted RBP6.44□□□□□ -1.38
TOP2A-202ENST00000577541 RNF208Q9H0X6 261 aa6.44□□□□□ -1.38
TOP2A-202ENST00000577541 USP17L3A6NCW0 530 aa6.43□□□□□ -1.38
TOP2A-202ENST00000577541 USP17L4A6NCW7 530 aa6.43□□□□□ -1.38
TOP2A-202ENST00000577541 ATP11AP98196 1134 aa6.43□□□□□ -1.38
TOP2A-202ENST00000577541 TMEM132AQ24JP5 1023 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms