RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 EXOC6BQ9Y2D4 811 aa10.59□□□□□ -0.71
PRPF8-213ENST00000576407 NOP58Q9Y2X3 529 aaKnown RBP10.59□□□□□ -0.71
PRPF8-213ENST00000576407 RIPOR2Q9Y4F9 1068 aa10.59□□□□□ -0.71
PRPF8-213ENST00000576407 BRCA1P38398 1863 aaKnown RBP10.59□□□□□ -0.71
PRPF8-213ENST00000576407 CACNA1SQ13698 1873 aa10.59□□□□□ -0.71
PRPF8-213ENST00000576407 SLX4Q8IY92 1834 aa10.58□□□□□ -0.72
PRPF8-213ENST00000576407 CIAO1O76071 339 aa10.58□□□□□ -0.72
PRPF8-213ENST00000576407 G3BP1Q13283 466 aaKnown RBP eCLIP10.58□□□□□ -0.724e-7■■■□□ 19
PRPF8-213ENST00000576407 DALRD3Q5D0E6 543 aaKnown RBP10.58□□□□□ -0.72
PRPF8-213ENST00000576407 TMC4Q7Z404 712 aa10.58□□□□□ -0.72
PRPF8-213ENST00000576407 SLC51AQ86UW1 340 aa10.58□□□□□ -0.72
PRPF8-213ENST00000576407 CCDC136Q96JN2 1154 aa10.58□□□□□ -0.72
PRPF8-213ENST00000576407 ATP6V0A2Q9Y487 856 aa10.58□□□□□ -0.72
PRPF8-213ENST00000576407 IL15P40933 162 aaPredicted RBP10.57□□□□□ -0.72
PRPF8-213ENST00000576407 CHRNDQ07001 517 aa10.57□□□□□ -0.72
PRPF8-213ENST00000576407 OS9Q13438 667 aaPredicted RBP10.57□□□□□ -0.72
PRPF8-213ENST00000576407 HSP90AB4PQ58FF6 505 aa10.57□□□□□ -0.72
PRPF8-213ENST00000576407 B4GALNT3Q6L9W6 998 aa10.57□□□□□ -0.72
PRPF8-213ENST00000576407 OLFM4Q6UX06 510 aa10.57□□□□□ -0.72
PRPF8-213ENST00000576407 SP8Q8IXZ3 490 aa10.57□□□□□ -0.72
PRPF8-213ENST00000576407 C7orf43Q8WVR3 580 aa10.57□□□□□ -0.72
PRPF8-213ENST00000576407 MINPP1Q9UNW1 487 aa10.57□□□□□ -0.72
PRPF8-213ENST00000576407 LRRC37AA6NMS7 1700 aa10.57□□□□□ -0.72
PRPF8-213ENST00000576407 MROH5Q6ZUA9 1318 aa10.57□□□□□ -0.72
PRPF8-213ENST00000576407 DCAF8L1A6NGE4 600 aa10.56□□□□□ -0.72
PRPF8-213ENST00000576407 APBB1O00213 710 aa10.56□□□□□ -0.72
PRPF8-213ENST00000576407 C21orf2O43822 256 aa10.56□□□□□ -0.72
PRPF8-213ENST00000576407 SASH1O94885 1247 aa10.56□□□□□ -0.72
PRPF8-213ENST00000576407 METTL24Q5JXM2 366 aa10.56□□□□□ -0.72
PRPF8-213ENST00000576407 SMC5Q8IY18 1101 aa10.56□□□□□ -0.72
PRPF8-213ENST00000576407 HELBQ8NG08 1087 aaPredicted RBP10.56□□□□□ -0.72
PRPF8-213ENST00000576407 GCC1Q96CN9 775 aa10.56□□□□□ -0.72
PRPF8-213ENST00000576407 ZNF219Q9P2Y4 722 aaPredicted RBP10.56□□□□□ -0.72
PRPF8-213ENST00000576407 BCS1LQ9Y276 419 aa10.56□□□□□ -0.72
PRPF8-213ENST00000576407 RAB11FIP3O75154 756 aa10.55□□□□□ -0.72
PRPF8-213ENST00000576407 TAF5LO75529 589 aa10.55□□□□□ -0.72
PRPF8-213ENST00000576407 TFCP2Q12800 502 aa10.55□□□□□ -0.72
PRPF8-213ENST00000576407 ERC1Q8IUD2 1116 aa10.55□□□□□ -0.72
PRPF8-213ENST00000576407 VGLL2Q8N8G2 317 aa10.55□□□□□ -0.72
PRPF8-213ENST00000576407 ANKRD2Q9GZV1 360 aa10.55□□□□□ -0.72
PRPF8-213ENST00000576407 TMX4Q9H1E5 349 aaPredicted RBP10.55□□□□□ -0.72
PRPF8-213ENST00000576407 ANKIB1Q9P2G1 1089 aa10.55□□□□□ -0.72
PRPF8-213ENST00000576407 CEP126Q9P2H0 1117 aa10.55□□□□□ -0.72
PRPF8-213ENST00000576407 NSFL1CQ9UNZ2 370 aaKnown RBP10.55□□□□□ -0.72
PRPF8-213ENST00000576407 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.55□□□□□ -0.72
PRPF8-213ENST00000576407 KDM2BQ8NHM5 1336 aa10.55□□□□□ -0.72
PRPF8-213ENST00000576407 A0A1B0GUL6 1792 aa10.54□□□□□ -0.72
PRPF8-213ENST00000576407 GOLGB1Q14789 3259 aaKnown RBP10.54□□□□□ -0.72
PRPF8-213ENST00000576407 PDE8BO95263 885 aa10.54□□□□□ -0.72
PRPF8-213ENST00000576407 GPSM2P81274 684 aa10.54□□□□□ -0.72
PRPF8-213ENST00000576407 CC2D2BQ6DHV5 1058 aa10.54□□□□□ -0.72
PRPF8-213ENST00000576407 RHPN1Q8TCX5 695 aa10.54□□□□□ -0.72
PRPF8-213ENST00000576407 KIF1BPQ96EK5 621 aa10.54□□□□□ -0.72
PRPF8-213ENST00000576407 LRRCC1Q9C099 1032 aa10.54□□□□□ -0.72
PRPF8-213ENST00000576407 PODXL2Q9NZ53 605 aa10.54□□□□□ -0.72
PRPF8-213ENST00000576407 XDHP47989 1333 aa10.54□□□□□ -0.72
PRPF8-213ENST00000576407 LTBP1Q14766 1721 aa10.53□□□□□ -0.72
PRPF8-213ENST00000576407 SNED1Q8TER0 1413 aa10.53□□□□□ -0.72
PRPF8-213ENST00000576407 WTIPA6NIX2 430 aaPredicted RBP10.53□□□□□ -0.72
PRPF8-213ENST00000576407 SNAP23O00161 211 aa10.53□□□□□ -0.72
PRPF8-213ENST00000576407 SMARCA5O60264 1052 aaPredicted RBP10.53□□□□□ -0.72
PRPF8-213ENST00000576407 CCDC93Q567U6 631 aa10.53□□□□□ -0.72
PRPF8-213ENST00000576407 SOGA3Q5TF21 947 aa10.53□□□□□ -0.72
PRPF8-213ENST00000576407 ANKRD45Q5TZF3 282 aa10.53□□□□□ -0.72
PRPF8-213ENST00000576407 DPP8Q6V1X1 898 aaPredicted RBP10.53□□□□□ -0.72
PRPF8-213ENST00000576407 CENPQQ7L2Z9 268 aaPredicted RBP10.53□□□□□ -0.72
PRPF8-213ENST00000576407 MPNDQ8N594 471 aa10.53□□□□□ -0.72
PRPF8-213ENST00000576407 IL1RAPL2Q9NP60 686 aa10.53□□□□□ -0.72
PRPF8-213ENST00000576407 ARFGEF1Q9Y6D6 1849 aa10.53□□□□□ -0.72
PRPF8-213ENST00000576407 DUOX1Q9NRD9 1551 aa10.52□□□□□ -0.72
PRPF8-213ENST00000576407 UFL1O94874 794 aa10.52□□□□□ -0.73
PRPF8-213ENST00000576407 KCNJ4P48050 445 aa10.52□□□□□ -0.73
PRPF8-213ENST00000576407 NUCB1Q02818 461 aa10.52□□□□□ -0.73
PRPF8-213ENST00000576407 PUM3Q15397 648 aaKnown RBP10.52□□□□□ -0.73
PRPF8-213ENST00000576407 ATP2B3Q16720 1220 aa10.52□□□□□ -0.73
PRPF8-213ENST00000576407 GRIPAP1Q4V328 841 aa10.52□□□□□ -0.73
PRPF8-213ENST00000576407 RTKN2Q8IZC4 609 aa10.52□□□□□ -0.73
PRPF8-213ENST00000576407 TBC1D16Q8TBP0 767 aa10.52□□□□□ -0.73
PRPF8-213ENST00000576407 GPR108Q9NPR9 543 aa10.52□□□□□ -0.73
PRPF8-213ENST00000576407 POLLQ9UGP5 575 aa10.52□□□□□ -0.73
PRPF8-213ENST00000576407 GGA1Q9UJY5 639 aa10.52□□□□□ -0.73
PRPF8-213ENST00000576407 AKAP2Q9Y2D5 859 aa10.52□□□□□ -0.73
PRPF8-213ENST00000576407 LEMD3Q9Y2U8 911 aa10.52□□□□□ -0.73
PRPF8-213ENST00000576407 ZNF804BA4D1E1 1349 aa10.52□□□□□ -0.73
PRPF8-213ENST00000576407 ZNF609O15014 1411 aa10.51□□□□□ -0.73
PRPF8-213ENST00000576407 A0A1B0GUL7 405 aa10.51□□□□□ -0.73
PRPF8-213ENST00000576407 C6orf229H3BNL8 230 aa10.51□□□□□ -0.73
PRPF8-213ENST00000576407 YBX3P16989 372 aaKnown RBP eCLIP10.51□□□□□ -0.73
PRPF8-213ENST00000576407 FGFR2P21802 821 aa10.51□□□□□ -0.73
PRPF8-213ENST00000576407 ATP2B4P23634 1241 aa10.51□□□□□ -0.73
PRPF8-213ENST00000576407 TIMM10P62072 90 aa10.51□□□□□ -0.73
PRPF8-213ENST00000576407 UBE4AQ14139 1066 aa10.51□□□□□ -0.73
PRPF8-213ENST00000576407 TNNI3KQ59H18 835 aa10.51□□□□□ -0.73
PRPF8-213ENST00000576407 CLASRPQ8N2M8 674 aaKnown RBP10.51□□□□□ -0.73
PRPF8-213ENST00000576407 LPIN2Q92539 896 aa10.51□□□□□ -0.73
PRPF8-213ENST00000576407 EAF2Q96CJ1 260 aaPredicted RBP10.51□□□□□ -0.73
PRPF8-213ENST00000576407 RTFDC1Q9BY42 306 aaPredicted RBP10.51□□□□□ -0.73
PRPF8-213ENST00000576407 ZBTB47Q9UFB7 747 aaPredicted RBP10.51□□□□□ -0.73
PRPF8-213ENST00000576407 FPGT-TNNI3KV9GXZ4 949 aa10.51□□□□□ -0.73
PRPF8-213ENST00000576407 SLC5A1P13866 664 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms