RNA–Protein interactions for RNA: ENST00000576202.1

TSR1-205, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-205ENST00000576202 HYPKQ9NX55 129 aa16.99■□□□□ 0.31
TSR1-205ENST00000576202 FAM155AB1AL88 458 aaPredicted RBP16.98■□□□□ 0.31
TSR1-205ENST00000576202 ADM5C9JUS6 153 aa16.98■□□□□ 0.31
TSR1-205ENST00000576202 IRS4O14654 1257 aaPredicted RBP16.98■□□□□ 0.31
TSR1-205ENST00000576202 RPS8P62241 208 aaKnown RBP16.98■□□□□ 0.31
TSR1-205ENST00000576202 TRIM28Q13263 835 aaKnown RBP16.98■□□□□ 0.31
TSR1-205ENST00000576202 RBM26Q5T8P6 1007 aaKnown RBP16.98■□□□□ 0.31
TSR1-205ENST00000576202 C2orf69Q8N8R5 385 aa16.98■□□□□ 0.31
TSR1-205ENST00000576202 MYBBP1AQ9BQG0 1328 aaKnown RBP16.97■□□□□ 0.31
TSR1-205ENST00000576202 WDR43Q15061 677 aaKnown RBP eCLIP16.97■□□□□ 0.31
TSR1-205ENST00000576202 CCDC102AQ96A19 550 aa16.97■□□□□ 0.31
TSR1-205ENST00000576202 ZC3H12CQ9C0D7 883 aaKnown RBP16.97■□□□□ 0.31
TSR1-205ENST00000576202 PODXL2Q9NZ53 605 aa16.97■□□□□ 0.31
TSR1-205ENST00000576202 KIF4BQ2VIQ3 1234 aa16.96■□□□□ 0.31
TSR1-205ENST00000576202 DUSP27Q5VZP5 1158 aa16.96■□□□□ 0.31
TSR1-205ENST00000576202 SAGE1Q9NXZ1 904 aa16.96■□□□□ 0.31
TSR1-205ENST00000576202 POLR2AP24928 1970 aaKnown RBP16.96■□□□□ 0.31
TSR1-205ENST00000576202 SCN9AQ15858 1988 aa16.95■□□□□ 0.3
TSR1-205ENST00000576202 VIL1P09327 827 aaKnown RBP16.95■□□□□ 0.3
TSR1-205ENST00000576202 ZNF157P51786 506 aaPredicted RBP16.95■□□□□ 0.3
TSR1-205ENST00000576202 KIF23Q02241 960 aaPredicted RBP16.95■□□□□ 0.3
TSR1-205ENST00000576202 RIC3Q7Z5B4 369 aa16.95■□□□□ 0.3
TSR1-205ENST00000576202 ZBTB38Q8NAP3 1195 aaPredicted RBP16.95■□□□□ 0.3
TSR1-205ENST00000576202 GGA3Q9NZ52 723 aa16.95■□□□□ 0.3
TSR1-205ENST00000576202 G3V3G9 751 aa16.94■□□□□ 0.3
TSR1-205ENST00000576202 HSP90B1P14625 803 aaKnown RBP16.94■□□□□ 0.3
TSR1-205ENST00000576202 GOLGA2Q08379 1002 aa16.94■□□□□ 0.3
TSR1-205ENST00000576202 DCAF8Q5TAQ9 597 aa16.94■□□□□ 0.3
TSR1-205ENST00000576202 SULF1Q8IWU6 871 aa16.94■□□□□ 0.3
TSR1-205ENST00000576202 SEC31BQ9NQW1 1179 aa16.94■□□□□ 0.3
TSR1-205ENST00000576202 MBIPQ9NS73 344 aa16.94■□□□□ 0.3
TSR1-205ENST00000576202 ANKIB1Q9P2G1 1089 aa16.94■□□□□ 0.3
TSR1-205ENST00000576202 UFL1O94874 794 aa16.93■□□□□ 0.3
TSR1-205ENST00000576202 GGA1Q9UJY5 639 aa16.93■□□□□ 0.3
TSR1-205ENST00000576202 ADAMTS8Q9UP79 889 aa16.93■□□□□ 0.3
TSR1-205ENST00000576202 TNRC18O15417 2968 aaPredicted RBP16.93■□□□□ 0.3
TSR1-205ENST00000576202 ZNF609O15014 1411 aa16.93■□□□□ 0.3
TSR1-205ENST00000576202 ASTN2O75129 1339 aaPredicted RBP16.93■□□□□ 0.3
TSR1-205ENST00000576202 SLC10A3P09131 477 aa16.92■□□□□ 0.3
TSR1-205ENST00000576202 AGBL3Q8NEM8 1001 aa16.92■□□□□ 0.3
TSR1-205ENST00000576202 CDCA5Q96FF9 252 aa16.92■□□□□ 0.3
TSR1-205ENST00000576202 MYD88Q99836 296 aa16.92■□□□□ 0.3
TSR1-205ENST00000576202 PHAXQ9H814 394 aaKnown RBP16.92■□□□□ 0.3
TSR1-205ENST00000576202 RNF186Q9NXI6 227 aa16.92■□□□□ 0.3
TSR1-205ENST00000576202 PSME4Q14997 1843 aa16.91■□□□□ 0.3
TSR1-205ENST00000576202 TRPA1O75762 1119 aa16.91■□□□□ 0.3
TSR1-205ENST00000576202 ZNF280AP59817 542 aaPredicted RBP16.91■□□□□ 0.3
TSR1-205ENST00000576202 CCDC152Q4G0S7 254 aa16.91■□□□□ 0.3
TSR1-205ENST00000576202 RSBN1LQ6PCB5 846 aaPredicted RBP16.91■□□□□ 0.3
TSR1-205ENST00000576202 CCDC191Q8NCU4 936 aa16.91■□□□□ 0.3
TSR1-205ENST00000576202 AKAP11Q9UKA4 1901 aa16.9■□□□□ 0.3
TSR1-205ENST00000576202 PDE8AO60658 829 aa16.9■□□□□ 0.3
TSR1-205ENST00000576202 PCCAP05165 728 aaPredicted RBP16.9■□□□□ 0.3
TSR1-205ENST00000576202 ZNF853P0CG23 659 aa16.9■□□□□ 0.3
TSR1-205ENST00000576202 SCARF1Q14162 830 aa16.9■□□□□ 0.3
TSR1-205ENST00000576202 ANGEL2Q5VTE6 544 aaKnown RBP16.9■□□□□ 0.3
TSR1-205ENST00000576202 DDX10Q13206 875 aaKnown RBP16.89■□□□□ 0.29
TSR1-205ENST00000576202 CSRNP1Q96S65 589 aa16.89■□□□□ 0.29
TSR1-205ENST00000576202 CWC25Q9NXE8 425 aaPredicted RBP16.89■□□□□ 0.29
TSR1-205ENST00000576202 XDHP47989 1333 aa16.89■□□□□ 0.29
TSR1-205ENST00000576202 PAPPA2Q9BXP8 1791 aa16.88■□□□□ 0.29
TSR1-205ENST00000576202 ELL2O00472 640 aaPredicted RBP16.88■□□□□ 0.29
TSR1-205ENST00000576202 USP17L8P0C7I0 530 aa16.88■□□□□ 0.29
TSR1-205ENST00000576202 GNAI1P63096 354 aa16.88■□□□□ 0.29
TSR1-205ENST00000576202 FKBP1BP68106 108 aa16.88■□□□□ 0.29
TSR1-205ENST00000576202 ANKRD18AQ8IVF6 992 aa16.88■□□□□ 0.29
TSR1-205ENST00000576202 REM2Q8IYK8 340 aaPredicted RBP16.88■□□□□ 0.29
TSR1-205ENST00000576202 CCDC85AQ96PX6 553 aaPredicted RBP16.88■□□□□ 0.29
TSR1-205ENST00000576202 GMLQ99445 158 aa16.88■□□□□ 0.29
TSR1-205ENST00000576202 MYOZ2Q9NPC6 264 aa16.88■□□□□ 0.29
TSR1-205ENST00000576202 IFT57Q9NWB7 429 aa16.88■□□□□ 0.29
TSR1-205ENST00000576202 PODNQ7Z5L7 613 aa16.87■□□□□ 0.29
TSR1-205ENST00000576202 RASAL3Q86YV0 1011 aa16.87■□□□□ 0.29
TSR1-205ENST00000576202 JARID2Q92833 1246 aaPredicted RBP16.87■□□□□ 0.29
TSR1-205ENST00000576202 PITPNM2Q9BZ72 1349 aa16.87■□□□□ 0.29
TSR1-205ENST00000576202 USP17L3A6NCW0 530 aa16.86■□□□□ 0.29
TSR1-205ENST00000576202 USP17L4A6NCW7 530 aa16.86■□□□□ 0.29
TSR1-205ENST00000576202 DDX58O95786 925 aaKnown RBP16.86■□□□□ 0.29
TSR1-205ENST00000576202 ATP2B4P23634 1241 aa16.86■□□□□ 0.29
TSR1-205ENST00000576202 CALD1Q05682 793 aaKnown RBP16.86■□□□□ 0.29
TSR1-205ENST00000576202 USP17L1Q7RTZ2 530 aa16.86■□□□□ 0.29
TSR1-205ENST00000576202 METTL22Q9BUU2 404 aaPredicted RBP16.86■□□□□ 0.29
TSR1-205ENST00000576202 CTU1Q7Z7A3 348 aaKnown RBP16.85■□□□□ 0.29
TSR1-205ENST00000576202 SOX10P56693 466 aa16.84■□□□□ 0.29
TSR1-205ENST00000576202 C8orf58Q8NAV2 365 aa16.84■□□□□ 0.29
TSR1-205ENST00000576202 CDC5LQ99459 802 aaKnown RBP16.84■□□□□ 0.29
TSR1-205ENST00000576202 CHMP4AQ9BY43 222 aa16.84■□□□□ 0.29
TSR1-205ENST00000576202 MED23Q9ULK4 1368 aa16.84■□□□□ 0.29
TSR1-205ENST00000576202 APAF1O14727 1248 aa16.83■□□□□ 0.28
TSR1-205ENST00000576202 CTSWP56202 376 aa16.83■□□□□ 0.28
TSR1-205ENST00000576202 CCDC30Q5VVM6 783 aa16.83■□□□□ 0.28
TSR1-205ENST00000576202 MAP3K2Q9Y2U5 619 aa16.83■□□□□ 0.28
TSR1-205ENST00000576202 ZNF646O15015 1829 aaPredicted RBP16.82■□□□□ 0.28
TSR1-205ENST00000576202 SPEF2Q9C093 1822 aa16.82■□□□□ 0.28
TSR1-205ENST00000576202 WTIPA6NIX2 430 aaPredicted RBP16.82■□□□□ 0.28
TSR1-205ENST00000576202 MOB2Q70IA6 237 aa16.82■□□□□ 0.28
TSR1-205ENST00000576202 BSDC1Q9NW68 430 aaPredicted RBP16.82■□□□□ 0.28
TSR1-205ENST00000576202 MINPP1Q9UNW1 487 aa16.82■□□□□ 0.28
TSR1-205ENST00000576202 SCAF8Q9UPN6 1271 aaKnown RBP16.82■□□□□ 0.28
TSR1-205ENST00000576202 MYH3P11055 1940 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms