RNA–Protein interactions for RNA: ENST00000575796.1

SPNS3-205, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-205ENST00000575796 ZNF541Q9H0D2 1346 aa15.99■□□□□ 0.15
SPNS3-205ENST00000575796 C6orf229H3BNL8 230 aa15.99■□□□□ 0.15
SPNS3-205ENST00000575796 PPIP5K2O43314 1243 aa15.99■□□□□ 0.15
SPNS3-205ENST00000575796 UFL1O94874 794 aa15.99■□□□□ 0.15
SPNS3-205ENST00000575796 CCDC57Q2TAC2 916 aa15.99■□□□□ 0.15
SPNS3-205ENST00000575796 C20orf194Q5TEA3 1177 aa15.99■□□□□ 0.15
SPNS3-205ENST00000575796 ITPRIPQ8IWB1 547 aa15.99■□□□□ 0.15
SPNS3-205ENST00000575796 LARGE2Q8N3Y3 721 aa15.99■□□□□ 0.15
SPNS3-205ENST00000575796 TBC1D16Q8TBP0 767 aa15.99■□□□□ 0.15
SPNS3-205ENST00000575796 PUS3Q9BZE2 481 aaKnown RBP15.99■□□□□ 0.15
SPNS3-205ENST00000575796 ANKIB1Q9P2G1 1089 aa15.99■□□□□ 0.15
SPNS3-205ENST00000575796 SNAP23O00161 211 aa15.98■□□□□ 0.15
SPNS3-205ENST00000575796 RIMBP2O15034 1052 aa15.98■□□□□ 0.15
SPNS3-205ENST00000575796 GRIPAP1Q4V328 841 aa15.98■□□□□ 0.15
SPNS3-205ENST00000575796 HELBQ8NG08 1087 aaPredicted RBP15.98■□□□□ 0.15
SPNS3-205ENST00000575796 MPHOSPH8Q99549 860 aa15.98■□□□□ 0.15
SPNS3-205ENST00000575796 C1orf115Q9H7X2 142 aa15.98■□□□□ 0.15
SPNS3-205ENST00000575796 XDHP47989 1333 aa15.97■□□□□ 0.15
SPNS3-205ENST00000575796 RFX5P48382 616 aaPredicted RBP15.97■□□□□ 0.15
SPNS3-205ENST00000575796 TAF7LQ5H9L4 462 aa15.97■□□□□ 0.15
SPNS3-205ENST00000575796 PODXL2Q9NZ53 605 aa15.97■□□□□ 0.15
SPNS3-205ENST00000575796 GGA1Q9UJY5 639 aa15.97■□□□□ 0.15
SPNS3-205ENST00000575796 TAF5LO75529 589 aa15.96■□□□□ 0.15
SPNS3-205ENST00000575796 GNAI3P08754 354 aa15.96■□□□□ 0.15
SPNS3-205ENST00000575796 KLRK1P26718 216 aa15.96■□□□□ 0.15
SPNS3-205ENST00000575796 CHRNDQ07001 517 aa15.96■□□□□ 0.15
SPNS3-205ENST00000575796 KIAA2012Q0VF49 1180 aa15.96■□□□□ 0.15
SPNS3-205ENST00000575796 LRRC24Q50LG9 513 aa15.96■□□□□ 0.15
SPNS3-205ENST00000575796 SUPT20HQ8NEM7 779 aa15.96■□□□□ 0.15
SPNS3-205ENST00000575796 NMRK2Q9NPI5 230 aa15.96■□□□□ 0.15
SPNS3-205ENST00000575796 ZC3H4Q9UPT8 1303 aaKnown RBP15.95■□□□□ 0.14
SPNS3-205ENST00000575796 DDNO94850 711 aaPredicted RBP15.95■□□□□ 0.14
SPNS3-205ENST00000575796 DOK7Q18PE1 504 aa15.95■□□□□ 0.14
SPNS3-205ENST00000575796 WASHC4Q2M389 1173 aa15.95■□□□□ 0.14
SPNS3-205ENST00000575796 LDHAL6AQ6ZMR3 332 aa15.95■□□□□ 0.14
SPNS3-205ENST00000575796 NIM1KQ8IY84 436 aa15.95■□□□□ 0.14
SPNS3-205ENST00000575796 DBNDD1Q9H9R9 158 aa15.95■□□□□ 0.14
SPNS3-205ENST00000575796 GPBP1L1Q9HC44 474 aaPredicted RBP15.95■□□□□ 0.14
SPNS3-205ENST00000575796 CNNM1Q9NRU3 951 aa15.95■□□□□ 0.14
SPNS3-205ENST00000575796 COG6Q9Y2V7 657 aa15.95■□□□□ 0.14
SPNS3-205ENST00000575796 SCN9AQ15858 1988 aa15.95■□□□□ 0.14
SPNS3-205ENST00000575796 GLTPD2A6NH11 291 aa15.94■□□□□ 0.14
SPNS3-205ENST00000575796 YDJCA8MPS7 323 aa15.94■□□□□ 0.14
SPNS3-205ENST00000575796 FZD9O00144 591 aa15.94■□□□□ 0.14
SPNS3-205ENST00000575796 ZBTB7BO15156 539 aaPredicted RBP15.94■□□□□ 0.14
SPNS3-205ENST00000575796 GNAI2P04899 355 aa15.94■□□□□ 0.14
SPNS3-205ENST00000575796 JDP2Q8WYK2 163 aa15.94■□□□□ 0.14
SPNS3-205ENST00000575796 PA2G4Q9UQ80 394 aaKnown RBP15.94■□□□□ 0.14
SPNS3-205ENST00000575796 ATP2B4P23634 1241 aa15.93■□□□□ 0.14
SPNS3-205ENST00000575796 PTPN12Q05209 780 aaKnown RBP15.93■□□□□ 0.14
SPNS3-205ENST00000575796 TXNRD3Q86VQ6 643 aa15.93■□□□□ 0.14
SPNS3-205ENST00000575796 SIL1Q9H173 461 aa15.93■□□□□ 0.14
SPNS3-205ENST00000575796 KCNQ5Q9NR82 932 aa15.93■□□□□ 0.14
SPNS3-205ENST00000575796 RIPOR2Q9Y4F9 1068 aa15.93■□□□□ 0.14
SPNS3-205ENST00000575796 WDR90Q96KV7 1748 aa15.92■□□□□ 0.14
SPNS3-205ENST00000575796 PNMA6EA0A0J9YXQ4 647 aa15.92■□□□□ 0.14
SPNS3-205ENST00000575796 MVPQ14764 893 aaKnown RBP15.92■□□□□ 0.14
SPNS3-205ENST00000575796 ANKRD2Q9GZV1 360 aa15.92■□□□□ 0.14
SPNS3-205ENST00000575796 ZNF804BA4D1E1 1349 aa15.92■□□□□ 0.14
SPNS3-205ENST00000575796 POTECB2RU33 542 aa15.91■□□□□ 0.14
SPNS3-205ENST00000575796 ECE2O60344 883 aa15.91■□□□□ 0.14
SPNS3-205ENST00000575796 RAD17O75943 681 aa15.91■□□□□ 0.14
SPNS3-205ENST00000575796 EYA3Q99504 573 aa15.91■□□□□ 0.14
SPNS3-205ENST00000575796 VPS33BQ9H267 617 aa15.91■□□□□ 0.14
SPNS3-205ENST00000575796 RRAGCQ9HB90 399 aa15.91■□□□□ 0.14
SPNS3-205ENST00000575796 ZNRF3Q9ULT6 936 aa15.91■□□□□ 0.14
SPNS3-205ENST00000575796 GJA3Q9Y6H8 435 aa15.91■□□□□ 0.14
SPNS3-205ENST00000575796 KDM2BQ8NHM5 1336 aa15.91■□□□□ 0.14
SPNS3-205ENST00000575796 IRS2Q9Y4H2 1338 aa15.91■□□□□ 0.14
SPNS3-205ENST00000575796 MED23Q9ULK4 1368 aa15.9■□□□□ 0.14
SPNS3-205ENST00000575796 KIF3CO14782 793 aa15.9■□□□□ 0.14
SPNS3-205ENST00000575796 SRGAP3O43295 1099 aa15.9■□□□□ 0.14
SPNS3-205ENST00000575796 KCNJ4P48050 445 aa15.9■□□□□ 0.14
SPNS3-205ENST00000575796 RRP1P56182 461 aaKnown RBP15.9■□□□□ 0.14
SPNS3-205ENST00000575796 EIF6P56537 245 aaKnown RBP15.9■□□□□ 0.14
SPNS3-205ENST00000575796 CXCL9Q07325 125 aa15.9■□□□□ 0.14
SPNS3-205ENST00000575796 MTX1Q13505 466 aa15.9■□□□□ 0.14
SPNS3-205ENST00000575796 ATG9AQ7Z3C6 839 aa15.9■□□□□ 0.14
SPNS3-205ENST00000575796 ZC3H12CQ9C0D7 883 aaKnown RBP15.9■□□□□ 0.14
SPNS3-205ENST00000575796 LEMD3Q9Y2U8 911 aa15.9■□□□□ 0.14
SPNS3-205ENST00000575796 ZNF646O15015 1829 aaPredicted RBP15.89■□□□□ 0.13
SPNS3-205ENST00000575796 EYA2O00167 538 aa15.89■□□□□ 0.13
SPNS3-205ENST00000575796 MS4A1P11836 297 aa15.89■□□□□ 0.13
SPNS3-205ENST00000575796 METTL24Q5JXM2 366 aa15.89■□□□□ 0.13
SPNS3-205ENST00000575796 DPY19L2Q6NUT2 758 aa15.89■□□□□ 0.13
SPNS3-205ENST00000575796 VGLL2Q8N8G2 317 aa15.89■□□□□ 0.13
SPNS3-205ENST00000575796 HDAC5Q9UQL6 1122 aa15.89■□□□□ 0.13
SPNS3-205ENST00000575796 PDE3AQ14432 1141 aa15.88■□□□□ 0.13
SPNS3-205ENST00000575796 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.88■□□□□ 0.13
SPNS3-205ENST00000575796 PSME4Q14997 1843 aa15.88■□□□□ 0.13
SPNS3-205ENST00000575796 MROH5Q6ZUA9 1318 aa15.88■□□□□ 0.13
SPNS3-205ENST00000575796 CEP85Q6P2H3 762 aa15.87■□□□□ 0.13
SPNS3-205ENST00000575796 GPC2Q8N158 579 aa15.87■□□□□ 0.13
SPNS3-205ENST00000575796 COPRSQ9NQ92 184 aa15.87■□□□□ 0.13
SPNS3-205ENST00000575796 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.87■□□□□ 0.13
SPNS3-205ENST00000575796 SHTN1A0MZ66 631 aa15.86■□□□□ 0.13
SPNS3-205ENST00000575796 G3V3G9 751 aa15.86■□□□□ 0.13
SPNS3-205ENST00000575796 PSMD14O00487 310 aa15.86■□□□□ 0.13
SPNS3-205ENST00000575796 GMPSP49915 693 aaPredicted RBP15.86■□□□□ 0.13
SPNS3-205ENST00000575796 POLA2Q14181 598 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms