RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 ZC3H12CQ9C0D7 883 aaKnown RBP15.61■□□□□ 0.09
CTNS-208ENST00000574218 GGA3Q9NZ52 723 aa15.61■□□□□ 0.09
CTNS-208ENST00000574218 HDAC9Q9UKV0 1011 aa15.61■□□□□ 0.09
CTNS-208ENST00000574218 SCN9AQ15858 1988 aa15.61■□□□□ 0.09
CTNS-208ENST00000574218 PAPPA2Q9BXP8 1791 aa15.6■□□□□ 0.09
CTNS-208ENST00000574218 RIPK4P57078 832 aa15.6■□□□□ 0.09
CTNS-208ENST00000574218 NCBP3Q53F19 620 aaKnown RBP15.6■□□□□ 0.09
CTNS-208ENST00000574218 EGFRP00533 1210 aa15.59■□□□□ 0.09
CTNS-208ENST00000574218 GPSM2P81274 684 aa15.59■□□□□ 0.09
CTNS-208ENST00000574218 CELF1Q92879 486 aaKnown RBP15.59■□□□□ 0.09
CTNS-208ENST00000574218 ZNF428Q96B54 188 aa15.59■□□□□ 0.09
CTNS-208ENST00000574218 CDCA5Q96FF9 252 aa15.59■□□□□ 0.09
CTNS-208ENST00000574218 CSRNP1Q96S65 589 aa15.59■□□□□ 0.09
CTNS-208ENST00000574218 SF3B3Q15393 1217 aaKnown RBP15.58■□□□□ 0.08
CTNS-208ENST00000574218 PKN2Q16513 984 aaKnown RBP15.58■□□□□ 0.08
CTNS-208ENST00000574218 POLLQ9UGP5 575 aa15.58■□□□□ 0.08
CTNS-208ENST00000574218 HSP90B1P14625 803 aaKnown RBP15.57■□□□□ 0.08
CTNS-208ENST00000574218 HOXD11P31277 338 aaPredicted RBP15.57■□□□□ 0.08
CTNS-208ENST00000574218 FKBP1BP68106 108 aa15.57■□□□□ 0.08
CTNS-208ENST00000574218 RASAL3Q86YV0 1011 aa15.57■□□□□ 0.08
CTNS-208ENST00000574218 PLBD2Q8NHP8 589 aa15.57■□□□□ 0.08
CTNS-208ENST00000574218 TBC1D16Q8TBP0 767 aa15.57■□□□□ 0.08
CTNS-208ENST00000574218 FAM89AQ96GI7 184 aa15.57■□□□□ 0.08
CTNS-208ENST00000574218 RTL9Q8NET4 1388 aa15.57■□□□□ 0.08
CTNS-208ENST00000574218 VIL1P09327 827 aaKnown RBP15.56■□□□□ 0.08
CTNS-208ENST00000574218 ANGEL2Q5VTE6 544 aaKnown RBP15.56■□□□□ 0.08
CTNS-208ENST00000574218 KCNQ5Q9NR82 932 aa15.56■□□□□ 0.08
CTNS-208ENST00000574218 ANKIB1Q9P2G1 1089 aa15.56■□□□□ 0.08
CTNS-208ENST00000574218 HPS5Q9UPZ3 1129 aa15.56■□□□□ 0.08
CTNS-208ENST00000574218 UFL1O94874 794 aa15.55■□□□□ 0.08
CTNS-208ENST00000574218 RPS8P62241 208 aaKnown RBP15.55■□□□□ 0.08
CTNS-208ENST00000574218 SCARF1Q14162 830 aa15.55■□□□□ 0.08
CTNS-208ENST00000574218 TTLL12Q14166 644 aaPredicted RBP15.55■□□□□ 0.08
CTNS-208ENST00000574218 RTL5Q5HYW3 569 aaPredicted RBP15.55■□□□□ 0.08
CTNS-208ENST00000574218 HDGFL1Q5TGJ6 251 aa15.55■□□□□ 0.08
CTNS-208ENST00000574218 ANKRD13DQ6ZTN6 518 aa15.55■□□□□ 0.08
CTNS-208ENST00000574218 CHPF2Q9P2E5 772 aa15.55■□□□□ 0.08
CTNS-208ENST00000574218 GGA1Q9UJY5 639 aa15.55■□□□□ 0.08
CTNS-208ENST00000574218 LAS1LQ9Y4W2 734 aaKnown RBP15.55■□□□□ 0.08
CTNS-208ENST00000574218 ATP5J2-PTCD1G3V325 749 aa15.54■□□□□ 0.08
CTNS-208ENST00000574218 IRS4O14654 1257 aaPredicted RBP15.54■□□□□ 0.08
CTNS-208ENST00000574218 RSBN1LQ6PCB5 846 aaPredicted RBP15.54■□□□□ 0.08
CTNS-208ENST00000574218 AGBL3Q8NEM8 1001 aa15.54■□□□□ 0.08
CTNS-208ENST00000574218 ISCA1Q9BUE6 129 aa15.54■□□□□ 0.08
CTNS-208ENST00000574218 ASTN2O75129 1339 aaPredicted RBP15.53■□□□□ 0.08
CTNS-208ENST00000574218 PITPNM2Q9BZ72 1349 aa15.53■□□□□ 0.08
CTNS-208ENST00000574218 RNF216Q9NWF9 866 aaPredicted RBP15.53■□□□□ 0.08
CTNS-208ENST00000574218 DBF4Q9UBU7 674 aaPredicted RBP15.53■□□□□ 0.08
CTNS-208ENST00000574218 SPEF2Q9C093 1822 aa15.52■□□□□ 0.08
CTNS-208ENST00000574218 USP17L8P0C7I0 530 aa15.52■□□□□ 0.08
CTNS-208ENST00000574218 NF2P35240 595 aa15.52■□□□□ 0.08
CTNS-208ENST00000574218 TMPOP42166 694 aaKnown RBP15.52■□□□□ 0.08
CTNS-208ENST00000574218 ZNF280AP59817 542 aaPredicted RBP15.52■□□□□ 0.08
CTNS-208ENST00000574218 ZNF296Q8WUU4 475 aaPredicted RBP15.52■□□□□ 0.08
CTNS-208ENST00000574218 GCC1Q96CN9 775 aa15.52■□□□□ 0.08
CTNS-208ENST00000574218 MYOZ2Q9NPC6 264 aa15.52■□□□□ 0.08
CTNS-208ENST00000574218 PODXL2Q9NZ53 605 aa15.52■□□□□ 0.08
CTNS-208ENST00000574218 ZNF609O15014 1411 aa15.51■□□□□ 0.07
CTNS-208ENST00000574218 COL4A1P02462 1669 aa15.51■□□□□ 0.07
CTNS-208ENST00000574218 MYH3P11055 1940 aa15.51■□□□□ 0.07
CTNS-208ENST00000574218 TBC1D8O95759 1140 aa15.51■□□□□ 0.07
CTNS-208ENST00000574218 HOXB7P09629 217 aa15.51■□□□□ 0.07
CTNS-208ENST00000574218 NEUROD2Q15784 382 aa15.51■□□□□ 0.07
CTNS-208ENST00000574218 CCDC152Q4G0S7 254 aa15.51■□□□□ 0.07
CTNS-208ENST00000574218 HYPKQ9NX55 129 aa15.51■□□□□ 0.07
CTNS-208ENST00000574218 UBE2Q2LH0YL09 131 aa15.5■□□□□ 0.07
CTNS-208ENST00000574218 GOLGA2Q08379 1002 aa15.5■□□□□ 0.07
CTNS-208ENST00000574218 SREBF2Q12772 1141 aa15.5■□□□□ 0.07
CTNS-208ENST00000574218 FBXO46Q6PJ61 603 aaPredicted RBP15.5■□□□□ 0.07
CTNS-208ENST00000574218 RIC3Q7Z5B4 369 aa15.5■□□□□ 0.07
CTNS-208ENST00000574218 USP17L3A6NCW0 530 aa15.49■□□□□ 0.07
CTNS-208ENST00000574218 USP17L4A6NCW7 530 aa15.49■□□□□ 0.07
CTNS-208ENST00000574218 GPR25O00155 361 aa15.49■□□□□ 0.07
CTNS-208ENST00000574218 KRT24Q2M2I5 525 aa15.49■□□□□ 0.07
CTNS-208ENST00000574218 USP17L1Q7RTZ2 530 aa15.49■□□□□ 0.07
CTNS-208ENST00000574218 ZBTB38Q8NAP3 1195 aaPredicted RBP15.49■□□□□ 0.07
CTNS-208ENST00000574218 XDHP47989 1333 aa15.48■□□□□ 0.07
CTNS-208ENST00000574218 CHL1O00533 1208 aa15.48■□□□□ 0.07
CTNS-208ENST00000574218 ATP2B4P23634 1241 aa15.48■□□□□ 0.07
CTNS-208ENST00000574218 TRIM28Q13263 835 aaKnown RBP15.48■□□□□ 0.07
CTNS-208ENST00000574218 MOB2Q70IA6 237 aa15.48■□□□□ 0.07
CTNS-208ENST00000574218 PODNQ7Z5L7 613 aa15.48■□□□□ 0.07
CTNS-208ENST00000574218 ANKRD18AQ8IVF6 992 aa15.48■□□□□ 0.07
CTNS-208ENST00000574218 OGFOD1Q8N543 542 aa15.48■□□□□ 0.07
CTNS-208ENST00000574218 FBXW7Q969H0 707 aa15.48■□□□□ 0.07
CTNS-208ENST00000574218 SEC31BQ9NQW1 1179 aa15.48■□□□□ 0.07
CTNS-208ENST00000574218 FKTNO75072 461 aa15.47■□□□□ 0.07
CTNS-208ENST00000574218 MKRN3Q13064 507 aaKnown RBP15.47■□□□□ 0.07
CTNS-208ENST00000574218 NOM1Q5C9Z4 860 aaKnown RBP15.47■□□□□ 0.07
CTNS-208ENST00000574218 ARMC9Q7Z3E5 817 aa15.47■□□□□ 0.07
CTNS-208ENST00000574218 PDE8AO60658 829 aa15.46■□□□□ 0.07
CTNS-208ENST00000574218 TM4SF4P48230 202 aa15.46■□□□□ 0.07
CTNS-208ENST00000574218 CCDC85AQ96PX6 553 aaPredicted RBP15.46■□□□□ 0.07
CTNS-208ENST00000574218 MYO3BQ8WXR4 1341 aa15.45■□□□□ 0.06
CTNS-208ENST00000574218 CCDC146Q8IYE0 955 aa15.45■□□□□ 0.06
CTNS-208ENST00000574218 GMLQ99445 158 aa15.45■□□□□ 0.06
CTNS-208ENST00000574218 CDC5LQ99459 802 aaKnown RBP15.45■□□□□ 0.06
CTNS-208ENST00000574218 MYD88Q99836 296 aa15.45■□□□□ 0.06
CTNS-208ENST00000574218 SCAF8Q9UPN6 1271 aaKnown RBP15.45■□□□□ 0.06
CTNS-208ENST00000574218 ALDH1A1P00352 501 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms