RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 YDJCA8MPS7 323 aa35.06■■■■□ 3.2
SCARF1-207ENST00000573867 RIMBP2O15034 1052 aa35.06■■■■□ 3.2
SCARF1-207ENST00000573867 BCAR3O75815 825 aa35.06■■■■□ 3.2
SCARF1-207ENST00000573867 UFL1O94874 794 aa35.06■■■■□ 3.2
SCARF1-207ENST00000573867 USP44Q9H0E7 712 aa35.06■■■■□ 3.2
SCARF1-207ENST00000573867 GJA3Q9Y6H8 435 aa35.06■■■■□ 3.2
SCARF1-207ENST00000573867 GGA1Q9UJY5 639 aa35.05■■■■□ 3.2
SCARF1-207ENST00000573867 XDHP47989 1333 aa35.05■■■■□ 3.2
SCARF1-207ENST00000573867 IGHMBP2P38935 993 aaKnown RBP35.04■■■■□ 3.2
SCARF1-207ENST00000573867 CXCL9Q07325 125 aa35.04■■■■□ 3.2
SCARF1-207ENST00000573867 API5Q9BZZ5 524 aaKnown RBP35.04■■■■□ 3.2
SCARF1-207ENST00000573867 CHMP3Q9Y3E7 222 aa35.04■■■■□ 3.2
SCARF1-207ENST00000573867 KIF16BQ96L93 1317 aa35.04■■■■□ 3.2
SCARF1-207ENST00000573867 ANKRD18BA2A2Z9 1011 aa35.03■■■■□ 3.2
SCARF1-207ENST00000573867 DBNDD1Q9H9R9 158 aa35.02■■■■□ 3.2
SCARF1-207ENST00000573867 TNNQ9UQP3 1299 aa35.02■■■■□ 3.2
SCARF1-207ENST00000573867 POTEIP0CG38 1075 aa35.01■■■■□ 3.2
SCARF1-207ENST00000573867 POTEJP0CG39 1038 aa35.01■■■■□ 3.2
SCARF1-207ENST00000573867 IFIT5Q13325 482 aaKnown RBP35.01■■■■□ 3.2
SCARF1-207ENST00000573867 EYA3Q99504 573 aa35.01■■■■□ 3.2
SCARF1-207ENST00000573867 TAF1DQ9H5J8 278 aaPredicted RBP35.01■■■■□ 3.2
SCARF1-207ENST00000573867 BICC1Q9H694 974 aaKnown RBP35.01■■■■□ 3.2
SCARF1-207ENST00000573867 SCN4AP35499 1836 aa35.01■■■■□ 3.19
SCARF1-207ENST00000573867 RAD17O75943 681 aa35■■■■□ 3.19
SCARF1-207ENST00000573867 DOK7Q18PE1 504 aa35■■■■□ 3.19
SCARF1-207ENST00000573867 ANKRD44Q8N8A2 993 aa35■■■■□ 3.19
SCARF1-207ENST00000573867 ZNF594Q96JF6 807 aaPredicted RBP35■■■■□ 3.19
SCARF1-207ENST00000573867 CCT4P50991 539 aaKnown RBP34.99■■■■□ 3.19
SCARF1-207ENST00000573867 SCNN1DP51172 638 aa34.99■■■■□ 3.19
SCARF1-207ENST00000573867 ARHGAP45Q92619 1136 aa34.99■■■■□ 3.19
SCARF1-207ENST00000573867 MPHOSPH8Q99549 860 aa34.99■■■■□ 3.19
SCARF1-207ENST00000573867 IQCA1LA6NCM1 817 aa34.98■■■■□ 3.19
SCARF1-207ENST00000573867 ATP2B4P23634 1241 aa34.98■■■■□ 3.19
SCARF1-207ENST00000573867 RABL6Q3YEC7 729 aaPredicted RBP34.98■■■■□ 3.19
SCARF1-207ENST00000573867 ZC3H12CQ9C0D7 883 aaKnown RBP34.97■■■■□ 3.19
SCARF1-207ENST00000573867 KCNQ5Q9NR82 932 aa34.97■■■■□ 3.19
SCARF1-207ENST00000573867 HACL1Q9UJ83 578 aa34.97■■■■□ 3.19
SCARF1-207ENST00000573867 ECE2O60344 883 aa34.96■■■■□ 3.19
SCARF1-207ENST00000573867 CIAPIN1Q6FI81 312 aa34.96■■■■□ 3.19
SCARF1-207ENST00000573867 TRIM27P14373 513 aa34.95■■■■□ 3.19
SCARF1-207ENST00000573867 CHRNDQ07001 517 aa34.95■■■■□ 3.19
SCARF1-207ENST00000573867 FSTL1Q12841 308 aa34.95■■■■□ 3.19
SCARF1-207ENST00000573867 CCDC57Q2TAC2 916 aa34.95■■■■□ 3.19
SCARF1-207ENST00000573867 EPHX2P34913 555 aa34.94■■■■□ 3.18
SCARF1-207ENST00000573867 SMC1BQ8NDV3 1235 aa34.94■■■■□ 3.18
SCARF1-207ENST00000573867 FRAT1Q92837 279 aaPredicted RBP34.94■■■■□ 3.18
SCARF1-207ENST00000573867 A0A1B0GUL6 1792 aa34.94■■■■□ 3.18
SCARF1-207ENST00000573867 HSPA6P17066 643 aa34.93■■■■□ 3.18
SCARF1-207ENST00000573867 EPS15P42566 896 aa34.93■■■■□ 3.18
SCARF1-207ENST00000573867 SNAP23O00161 211 aa34.92■■■■□ 3.18
SCARF1-207ENST00000573867 GMPSP49915 693 aaPredicted RBP34.92■■■■□ 3.18
SCARF1-207ENST00000573867 INTS3Q68E01 1043 aaKnown RBP34.92■■■■□ 3.18
SCARF1-207ENST00000573867 ATF7IPQ6VMQ6 1270 aa34.92■■■■□ 3.18
SCARF1-207ENST00000573867 SCN9AQ15858 1988 aa34.92■■■■□ 3.18
SCARF1-207ENST00000573867 ADAMTSL1Q8N6G6 1762 aa34.92■■■■□ 3.18
SCARF1-207ENST00000573867 MED23Q9ULK4 1368 aa34.91■■■■□ 3.18
SCARF1-207ENST00000573867 KLRK1P26718 216 aa34.91■■■■□ 3.18
SCARF1-207ENST00000573867 TXNRD3Q86VQ6 643 aa34.91■■■■□ 3.18
SCARF1-207ENST00000573867 HELBQ8NG08 1087 aaPredicted RBP34.91■■■■□ 3.18
SCARF1-207ENST00000573867 ANKRD2Q9GZV1 360 aa34.91■■■■□ 3.18
SCARF1-207ENST00000573867 CEP350Q5VT06 3117 aa34.9■■■■□ 3.18
SCARF1-207ENST00000573867 PSMD14O00487 310 aa34.9■■■■□ 3.18
SCARF1-207ENST00000573867 LEMD3Q9Y2U8 911 aa34.9■■■■□ 3.18
SCARF1-207ENST00000573867 TAF5LO75529 589 aa34.89■■■■□ 3.18
SCARF1-207ENST00000573867 TNIP1Q15025 636 aa34.89■■■■□ 3.18
SCARF1-207ENST00000573867 TAF7LQ5H9L4 462 aa34.89■■■■□ 3.18
SCARF1-207ENST00000573867 LDHAL6AQ6ZMR3 332 aa34.89■■■■□ 3.18
SCARF1-207ENST00000573867 MEIS3Q99687 375 aa34.89■■■■□ 3.18
SCARF1-207ENST00000573867 PUS3Q9BZE2 481 aaKnown RBP34.89■■■■□ 3.18
SCARF1-207ENST00000573867 GPRC5DQ9NZD1 345 aa34.89■■■■□ 3.18
SCARF1-207ENST00000573867 ZNF804BA4D1E1 1349 aa34.88■■■■□ 3.17
SCARF1-207ENST00000573867 IPO8O15397 1037 aaKnown RBP34.88■■■■□ 3.17
SCARF1-207ENST00000573867 EAPPQ56P03 285 aaPredicted RBP34.88■■■■□ 3.17
SCARF1-207ENST00000573867 ZBTB12Q9Y330 459 aaPredicted RBP34.88■■■■□ 3.17
SCARF1-207ENST00000573867 LMOD1P29536 600 aaPredicted RBP34.87■■■■□ 3.17
SCARF1-207ENST00000573867 CLUAP1Q96AJ1 413 aa34.87■■■■□ 3.17
SCARF1-207ENST00000573867 IRS2Q9Y4H2 1338 aa34.86■■■■□ 3.17
SCARF1-207ENST00000573867 SHTN1A0MZ66 631 aa34.86■■■■□ 3.17
SCARF1-207ENST00000573867 UBTFL1P0CB47 393 aaPredicted RBP34.86■■■■□ 3.17
SCARF1-207ENST00000573867 CHADLQ6NUI6 762 aa34.86■■■■□ 3.17
SCARF1-207ENST00000573867 LDHDQ86WU2 507 aa34.86■■■■□ 3.17
SCARF1-207ENST00000573867 CNNM1Q9NRU3 951 aa34.86■■■■□ 3.17
SCARF1-207ENST00000573867 ZKSCAN2Q63HK3 967 aa34.84■■■■□ 3.17
SCARF1-207ENST00000573867 KLHDC4Q8TBB5 520 aa34.84■■■■□ 3.17
SCARF1-207ENST00000573867 G3V3G9 751 aa34.83■■■■□ 3.17
SCARF1-207ENST00000573867 DCAF8Q5TAQ9 597 aa34.83■■■■□ 3.17
SCARF1-207ENST00000573867 RIPOR2Q9Y4F9 1068 aa34.83■■■■□ 3.17
SCARF1-207ENST00000573867 LRRFIP2Q9Y608 721 aaKnown RBP34.83■■■■□ 3.17
SCARF1-207ENST00000573867 RFX5P48382 616 aaPredicted RBP34.82■■■■□ 3.16
SCARF1-207ENST00000573867 PNMA8AQ86V59 439 aaPredicted RBP34.82■■■■□ 3.16
SCARF1-207ENST00000573867 VIL1P09327 827 aaKnown RBP34.81■■■■□ 3.16
SCARF1-207ENST00000573867 LRRC24Q50LG9 513 aa34.81■■■■□ 3.16
SCARF1-207ENST00000573867 PLIN1O60240 522 aa34.8■■■■□ 3.16
SCARF1-207ENST00000573867 KCNJ4P48050 445 aa34.8■■■■□ 3.16
SCARF1-207ENST00000573867 TMEM57Q8N5G2 664 aa34.8■■■■□ 3.16
SCARF1-207ENST00000573867 ADARB2Q9NS39 739 aaKnown RBP34.8■■■■□ 3.16
SCARF1-207ENST00000573867 PSME4Q14997 1843 aa34.8■■■■□ 3.16
SCARF1-207ENST00000573867 ZNF646O15015 1829 aaPredicted RBP34.79■■■■□ 3.16
SCARF1-207ENST00000573867 PODNQ7Z5L7 613 aa34.79■■■■□ 3.16
SCARF1-207ENST00000573867 CNOT7Q9UIV1 285 aaKnown RBP34.79■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms