RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.22□□□□□ -0.45
CHRNB1-205ENST00000573209 ECEL1O95672 775 aa12.21□□□□□ -0.45
CHRNB1-205ENST00000573209 IMPDH2P12268 514 aa12.21□□□□□ -0.45
CHRNB1-205ENST00000573209 PRPHP41219 470 aa12.21□□□□□ -0.45
CHRNB1-205ENST00000573209 LARP6Q9BRS8 491 aaKnown RBP12.21□□□□□ -0.45
CHRNB1-205ENST00000573209 CRACR2AQ9BSW2 395 aa12.21□□□□□ -0.45
CHRNB1-205ENST00000573209 PEAK1Q9H792 1746 aa12.21□□□□□ -0.45
CHRNB1-205ENST00000573209 CDKL5O76039 1030 aa12.21□□□□□ -0.46
CHRNB1-205ENST00000573209 ZRANB2O95218 330 aaKnown RBP eCLIP12.21□□□□□ -0.46
CHRNB1-205ENST00000573209 SLU7O95391 586 aaKnown RBP12.21□□□□□ -0.46
CHRNB1-205ENST00000573209 OAS2P29728 719 aaKnown RBP12.21□□□□□ -0.46
CHRNB1-205ENST00000573209 NF2P35240 595 aa12.21□□□□□ -0.46
CHRNB1-205ENST00000573209 RDXP35241 583 aaKnown RBP12.21□□□□□ -0.46
CHRNB1-205ENST00000573209 LMAN1P49257 510 aa12.21□□□□□ -0.46
CHRNB1-205ENST00000573209 EIF5P55010 431 aaKnown RBP12.21□□□□□ -0.46
CHRNB1-205ENST00000573209 ANKRD18AQ8IVF6 992 aa12.21□□□□□ -0.46
CHRNB1-205ENST00000573209 REXO1L1PQ8IX06 675 aa12.21□□□□□ -0.46
CHRNB1-205ENST00000573209 PRPF38AQ8NAV1 312 aaKnown RBP12.21□□□□□ -0.46
CHRNB1-205ENST00000573209 MCM8Q9UJA3 840 aa12.21□□□□□ -0.46
CHRNB1-205ENST00000573209 FBLN1P23142 703 aa12.2□□□□□ -0.46
CHRNB1-205ENST00000573209 CDC37Q16543 378 aaPredicted RBP12.2□□□□□ -0.46
CHRNB1-205ENST00000573209 CEP135Q66GS9 1140 aa12.2□□□□□ -0.46
CHRNB1-205ENST00000573209 GAS2L2Q8NHY3 880 aa12.2□□□□□ -0.46
CHRNB1-205ENST00000573209 KCNB2Q92953 911 aa12.2□□□□□ -0.46
CHRNB1-205ENST00000573209 RMI1Q9H9A7 625 aa12.2□□□□□ -0.46
CHRNB1-205ENST00000573209 FAM208AQ9UK61 1670 aaKnown RBP12.2□□□□□ -0.46
CHRNB1-205ENST00000573209 UBR1Q8IWV7 1749 aa12.2□□□□□ -0.46
CHRNB1-205ENST00000573209 ELL2O00472 640 aaPredicted RBP12.2□□□□□ -0.46
CHRNB1-205ENST00000573209 CLCN6P51797 869 aa12.2□□□□□ -0.46
CHRNB1-205ENST00000573209 TMCO3Q6UWJ1 677 aa12.2□□□□□ -0.46
CHRNB1-205ENST00000573209 NCAPG2Q86XI2 1143 aa12.2□□□□□ -0.46
CHRNB1-205ENST00000573209 N4BP2L2Q92802 583 aaPredicted RBP12.2□□□□□ -0.46
CHRNB1-205ENST00000573209 PDRG1Q9NUG6 133 aa12.2□□□□□ -0.46
CHRNB1-205ENST00000573209 CCDC61Q9Y6R9 512 aa12.2□□□□□ -0.46
CHRNB1-205ENST00000573209 FER1L4A9Z1Z3 1794 aa12.19□□□□□ -0.46
CHRNB1-205ENST00000573209 TPD52L2O43399 206 aaKnown RBP12.19□□□□□ -0.46
CHRNB1-205ENST00000573209 NAP1L1P55209 391 aaKnown RBP12.19□□□□□ -0.46
CHRNB1-205ENST00000573209 RBM12BQ8IXT5 1001 aaKnown RBP12.19□□□□□ -0.46
CHRNB1-205ENST00000573209 CTCFLQ8NI51 663 aaPredicted RBP12.19□□□□□ -0.46
CHRNB1-205ENST00000573209 NUDT16Q96DE0 195 aaKnown RBP12.19□□□□□ -0.46
CHRNB1-205ENST00000573209 SRRTQ9BXP5 876 aaKnown RBP12.19□□□□□ -0.46
CHRNB1-205ENST00000573209 EXOC6BQ9Y2D4 811 aa12.19□□□□□ -0.46
CHRNB1-205ENST00000573209 OVOS2A0A0J9YW53 1432 aa12.19□□□□□ -0.46
CHRNB1-205ENST00000573209 OVOS2Q6IE36 1432 aa12.19□□□□□ -0.46
CHRNB1-205ENST00000573209 CHMLP26374 656 aa12.19□□□□□ -0.46
CHRNB1-205ENST00000573209 HNRNPH1P31943 449 aaKnown RBP12.19□□□□□ -0.46
CHRNB1-205ENST00000573209 CCNHP51946 323 aaPredicted RBP12.19□□□□□ -0.46
CHRNB1-205ENST00000573209 NUTM2GQ5VZR2 741 aa12.19□□□□□ -0.46
CHRNB1-205ENST00000573209 MICAL1Q8TDZ2 1067 aa12.19□□□□□ -0.46
CHRNB1-205ENST00000573209 DDX11Q96FC9 970 aa12.19□□□□□ -0.46
CHRNB1-205ENST00000573209 FOXD4L1Q9NU39 408 aa12.19□□□□□ -0.46
CHRNB1-205ENST00000573209 CLIP2Q9UDT6 1046 aa12.19□□□□□ -0.46
CHRNB1-205ENST00000573209 ELP1O95163 1332 aa12.19□□□□□ -0.46
CHRNB1-205ENST00000573209 MSH6P52701 1360 aa12.19□□□□□ -0.46
CHRNB1-205ENST00000573209 LRRC37A3O60309 1634 aa12.19□□□□□ -0.46
CHRNB1-205ENST00000573209 RTL1A6NKG5 1358 aa12.18□□□□□ -0.46
CHRNB1-205ENST00000573209 MRPL12P52815 198 aaKnown RBP12.18□□□□□ -0.46
CHRNB1-205ENST00000573209 MICALL1Q8N3F8 863 aa12.18□□□□□ -0.46
CHRNB1-205ENST00000573209 BLOC1S6Q9UL45 172 aa12.18□□□□□ -0.46
CHRNB1-205ENST00000573209 METP08581 1390 aa12.18□□□□□ -0.46
CHRNB1-205ENST00000573209 CCDC171Q6TFL3 1326 aa12.18□□□□□ -0.46
CHRNB1-205ENST00000573209 AP1G2O75843 785 aa12.18□□□□□ -0.46
CHRNB1-205ENST00000573209 ERLIN2O94905 339 aa12.18□□□□□ -0.46
CHRNB1-205ENST00000573209 PECAM1P16284 738 aaPredicted RBP12.18□□□□□ -0.46
CHRNB1-205ENST00000573209 LZTS2Q9BRK4 669 aa12.18□□□□□ -0.46
CHRNB1-205ENST00000573209 RBM42Q9BTD8 480 aaKnown RBP12.18□□□□□ -0.46
CHRNB1-205ENST00000573209 USP26Q9BXU7 913 aa12.18□□□□□ -0.46
CHRNB1-205ENST00000573209 ERBB3P21860 1342 aa12.17□□□□□ -0.46
CHRNB1-205ENST00000573209 CHL1O00533 1208 aa12.17□□□□□ -0.46
CHRNB1-205ENST00000573209 HSPA2P54652 639 aa12.17□□□□□ -0.46
CHRNB1-205ENST00000573209 PDIA5Q14554 519 aa12.17□□□□□ -0.46
CHRNB1-205ENST00000573209 CEP85Q6P2H3 762 aa12.17□□□□□ -0.46
CHRNB1-205ENST00000573209 FILIP1Q7Z7B0 1213 aa12.17□□□□□ -0.46
CHRNB1-205ENST00000573209 DZIP3Q86Y13 1208 aaKnown RBP12.17□□□□□ -0.46
CHRNB1-205ENST00000573209 ATL2Q8NHH9 583 aa12.17□□□□□ -0.46
CHRNB1-205ENST00000573209 XRN1Q8IZH2 1706 aaKnown RBP12.17□□□□□ -0.46
CHRNB1-205ENST00000573209 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.17□□□□□ -0.46
CHRNB1-205ENST00000573209 A0A1B0GUA9 196 aa12.16□□□□□ -0.46
CHRNB1-205ENST00000573209 FAM83GA6ND36 823 aa12.16□□□□□ -0.46
CHRNB1-205ENST00000573209 PAX3P23760 479 aa12.16□□□□□ -0.46
CHRNB1-205ENST00000573209 GPTP24298 496 aa12.16□□□□□ -0.46
CHRNB1-205ENST00000573209 CPLX2Q6PUV4 134 aaKnown RBP12.16□□□□□ -0.46
CHRNB1-205ENST00000573209 ST18O60284 1047 aa12.16□□□□□ -0.46
CHRNB1-205ENST00000573209 RTN2O75298 545 aa12.16□□□□□ -0.46
CHRNB1-205ENST00000573209 DDR1Q08345 913 aa12.16□□□□□ -0.46
CHRNB1-205ENST00000573209 MCM6Q14566 821 aa12.16□□□□□ -0.46
CHRNB1-205ENST00000573209 RRS1Q15050 365 aaKnown RBP12.16□□□□□ -0.46
CHRNB1-205ENST00000573209 TPD52L1Q16890 204 aaPredicted RBP12.16□□□□□ -0.46
CHRNB1-205ENST00000573209 LRRC31Q6UY01 552 aa12.16□□□□□ -0.46
CHRNB1-205ENST00000573209 ZRANB1Q9UGI0 708 aa12.16□□□□□ -0.46
CHRNB1-205ENST00000573209 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.16□□□□□ -0.46
CHRNB1-205ENST00000573209 SUN2Q9UH99 717 aa12.16□□□□□ -0.46
CHRNB1-205ENST00000573209 ADAM21Q9UKJ8 722 aa12.16□□□□□ -0.46
CHRNB1-205ENST00000573209 ARHGEF10O15013 1369 aa12.16□□□□□ -0.46
CHRNB1-205ENST00000573209 TTC21BQ7Z4L5 1316 aa12.16□□□□□ -0.46
CHRNB1-205ENST00000573209 PES1O00541 588 aaKnown RBP12.15□□□□□ -0.46
CHRNB1-205ENST00000573209 HHATQ5VTY9 493 aa12.15□□□□□ -0.46
CHRNB1-205ENST00000573209 HMMRO75330 724 aa12.15□□□□□ -0.46
CHRNB1-205ENST00000573209 OATP04181 439 aa12.15□□□□□ -0.46
CHRNB1-205ENST00000573209 EIF4A2Q14240 407 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms