RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 UFL1O94874 794 aa26.06■■□□□ 1.76
CHMP6-204ENST00000572778 CCT4P50991 539 aaKnown RBP26.06■■□□□ 1.76
CHMP6-204ENST00000572778 GPR101Q96P66 508 aaPredicted RBP26.06■■□□□ 1.76
CHMP6-204ENST00000572778 MINPP1Q9UNW1 487 aa26.06■■□□□ 1.76
CHMP6-204ENST00000572778 DUOX1Q9NRD9 1551 aa26.05■■□□□ 1.76
CHMP6-204ENST00000572778 GPC2Q8N158 579 aa26.05■■□□□ 1.76
CHMP6-204ENST00000572778 FRAT1Q92837 279 aaPredicted RBP26.05■■□□□ 1.76
CHMP6-204ENST00000572778 XDHP47989 1333 aa26.05■■□□□ 1.76
CHMP6-204ENST00000572778 CCDC57Q2TAC2 916 aa26.04■■□□□ 1.76
CHMP6-204ENST00000572778 ARHGAP45Q92619 1136 aa26.04■■□□□ 1.76
CHMP6-204ENST00000572778 L3MBTL3Q96JM7 780 aaPredicted RBP26.04■■□□□ 1.76
CHMP6-204ENST00000572778 ZC3H12CQ9C0D7 883 aaKnown RBP26.04■■□□□ 1.76
CHMP6-204ENST00000572778 USP44Q9H0E7 712 aa26.04■■□□□ 1.76
CHMP6-204ENST00000572778 IQCA1LA6NCM1 817 aa26.03■■□□□ 1.76
CHMP6-204ENST00000572778 IPO8O15397 1037 aaKnown RBP26.03■■□□□ 1.76
CHMP6-204ENST00000572778 TAF7LQ5H9L4 462 aa26.03■■□□□ 1.76
CHMP6-204ENST00000572778 RBM46Q8TBY0 533 aaKnown RBP26.03■■□□□ 1.76
CHMP6-204ENST00000572778 KAZALD1Q96I82 304 aa26.03■■□□□ 1.76
CHMP6-204ENST00000572778 ATP2B4P23634 1241 aa26.02■■□□□ 1.76
CHMP6-204ENST00000572778 DOK7Q18PE1 504 aa26.02■■□□□ 1.76
CHMP6-204ENST00000572778 BICC1Q9H694 974 aaKnown RBP26.02■■□□□ 1.76
CHMP6-204ENST00000572778 DBNDD1Q9H9R9 158 aa26.02■■□□□ 1.76
CHMP6-204ENST00000572778 WDR90Q96KV7 1748 aa26.02■■□□□ 1.76
CHMP6-204ENST00000572778 MYH3P11055 1940 aa26.02■■□□□ 1.76
CHMP6-204ENST00000572778 G3V3G9 751 aa26.01■■□□□ 1.75
CHMP6-204ENST00000572778 CXCL9Q07325 125 aa26.01■■□□□ 1.75
CHMP6-204ENST00000572778 DCAF8Q5TAQ9 597 aa26.01■■□□□ 1.75
CHMP6-204ENST00000572778 ZNF594Q96JF6 807 aaPredicted RBP26.01■■□□□ 1.75
CHMP6-204ENST00000572778 HACL1Q9UJ83 578 aa26.01■■□□□ 1.75
CHMP6-204ENST00000572778 RAD17O75943 681 aa26■■□□□ 1.75
CHMP6-204ENST00000572778 CIAPIN1Q6FI81 312 aa26■■□□□ 1.75
CHMP6-204ENST00000572778 ANKRD2Q9GZV1 360 aa25.99■■□□□ 1.75
CHMP6-204ENST00000572778 WTIPA6NIX2 430 aaPredicted RBP25.98■■□□□ 1.75
CHMP6-204ENST00000572778 YDJCA8MPS7 323 aa25.98■■□□□ 1.75
CHMP6-204ENST00000572778 ECE2O60344 883 aa25.98■■□□□ 1.75
CHMP6-204ENST00000572778 ATF7IPQ6VMQ6 1270 aa25.98■■□□□ 1.75
CHMP6-204ENST00000572778 TAF1DQ9H5J8 278 aaPredicted RBP25.98■■□□□ 1.75
CHMP6-204ENST00000572778 UBTFL1P0CB47 393 aaPredicted RBP25.97■■□□□ 1.75
CHMP6-204ENST00000572778 TRIM27P14373 513 aa25.97■■□□□ 1.75
CHMP6-204ENST00000572778 LMOD1P29536 600 aaPredicted RBP25.97■■□□□ 1.75
CHMP6-204ENST00000572778 CHRNDQ07001 517 aa25.97■■□□□ 1.75
CHMP6-204ENST00000572778 TNIP1Q15025 636 aa25.97■■□□□ 1.75
CHMP6-204ENST00000572778 RABL6Q3YEC7 729 aaPredicted RBP25.97■■□□□ 1.75
CHMP6-204ENST00000572778 LDHAL6AQ6ZMR3 332 aa25.97■■□□□ 1.75
CHMP6-204ENST00000572778 TNNQ9UQP3 1299 aa25.97■■□□□ 1.75
CHMP6-204ENST00000572778 LEMD3Q9Y2U8 911 aa25.97■■□□□ 1.75
CHMP6-204ENST00000572778 EPHX2P34913 555 aa25.96■■□□□ 1.75
CHMP6-204ENST00000572778 FSTL1Q12841 308 aa25.96■■□□□ 1.75
CHMP6-204ENST00000572778 ANKRD44Q8N8A2 993 aa25.96■■□□□ 1.75
CHMP6-204ENST00000572778 SMC1BQ8NDV3 1235 aa25.96■■□□□ 1.75
CHMP6-204ENST00000572778 CLUAP1Q96AJ1 413 aa25.96■■□□□ 1.75
CHMP6-204ENST00000572778 CNNM1Q9NRU3 951 aa25.96■■□□□ 1.75
CHMP6-204ENST00000572778 LTBP1Q14766 1721 aa25.96■■□□□ 1.75
CHMP6-204ENST00000572778 KCNJ4P48050 445 aa25.95■■□□□ 1.74
CHMP6-204ENST00000572778 EAPPQ56P03 285 aaPredicted RBP25.95■■□□□ 1.74
CHMP6-204ENST00000572778 ZKSCAN2Q63HK3 967 aa25.95■■□□□ 1.74
CHMP6-204ENST00000572778 INTS3Q68E01 1043 aaKnown RBP25.95■■□□□ 1.74
CHMP6-204ENST00000572778 HELBQ8NG08 1087 aaPredicted RBP25.95■■□□□ 1.74
CHMP6-204ENST00000572778 POTEIP0CG38 1075 aa25.94■■□□□ 1.74
CHMP6-204ENST00000572778 POTEJP0CG39 1038 aa25.94■■□□□ 1.74
CHMP6-204ENST00000572778 SCNN1DP51172 638 aa25.94■■□□□ 1.74
CHMP6-204ENST00000572778 ZNF804BA4D1E1 1349 aa25.93■■□□□ 1.74
CHMP6-204ENST00000572778 PLIN1O60240 522 aa25.93■■□□□ 1.74
CHMP6-204ENST00000572778 TAF5LO75529 589 aa25.93■■□□□ 1.74
CHMP6-204ENST00000572778 GMPSP49915 693 aaPredicted RBP25.93■■□□□ 1.74
CHMP6-204ENST00000572778 KCNQ5Q9NR82 932 aa25.93■■□□□ 1.74
CHMP6-204ENST00000572778 PSMD14O00487 310 aa25.92■■□□□ 1.74
CHMP6-204ENST00000572778 EPS15P42566 896 aa25.92■■□□□ 1.74
CHMP6-204ENST00000572778 MEIS3Q99687 375 aa25.92■■□□□ 1.74
CHMP6-204ENST00000572778 SPEF2Q9C093 1822 aa25.92■■□□□ 1.74
CHMP6-204ENST00000572778 MED23Q9ULK4 1368 aa25.92■■□□□ 1.74
CHMP6-204ENST00000572778 HSPA6P17066 643 aa25.91■■□□□ 1.74
CHMP6-204ENST00000572778 PNMA8AQ86V59 439 aaPredicted RBP25.91■■□□□ 1.74
CHMP6-204ENST00000572778 PUS3Q9BZE2 481 aaKnown RBP25.91■■□□□ 1.74
CHMP6-204ENST00000572778 HDAC5Q9UQL6 1122 aa25.91■■□□□ 1.74
CHMP6-204ENST00000572778 CLEC11AQ9Y240 323 aa25.91■■□□□ 1.74
CHMP6-204ENST00000572778 SNAP23O00161 211 aa25.9■■□□□ 1.74
CHMP6-204ENST00000572778 CHADLQ6NUI6 762 aa25.9■■□□□ 1.74
CHMP6-204ENST00000572778 GPRC5DQ9NZD1 345 aa25.9■■□□□ 1.74
CHMP6-204ENST00000572778 ZBTB12Q9Y330 459 aaPredicted RBP25.9■■□□□ 1.74
CHMP6-204ENST00000572778 LRRFIP2Q9Y608 721 aaKnown RBP25.9■■□□□ 1.74
CHMP6-204ENST00000572778 TXNRD3Q86VQ6 643 aa25.89■■□□□ 1.74
CHMP6-204ENST00000572778 LDHDQ86WU2 507 aa25.89■■□□□ 1.74
CHMP6-204ENST00000572778 GNAI3P08754 354 aa25.88■■□□□ 1.73
CHMP6-204ENST00000572778 KLRK1P26718 216 aa25.88■■□□□ 1.73
CHMP6-204ENST00000572778 PODNQ7Z5L7 613 aa25.88■■□□□ 1.73
CHMP6-204ENST00000572778 SCN4AP35499 1836 aa25.88■■□□□ 1.73
CHMP6-204ENST00000572778 FTSJ3Q8IY81 847 aaKnown RBP25.87■■□□□ 1.73
CHMP6-204ENST00000572778 TMEM57Q8N5G2 664 aa25.87■■□□□ 1.73
CHMP6-204ENST00000572778 KLHDC4Q8TBB5 520 aa25.87■■□□□ 1.73
CHMP6-204ENST00000572778 LRRC24Q50LG9 513 aa25.86■■□□□ 1.73
CHMP6-204ENST00000572778 COA1Q9GZY4 146 aa25.86■■□□□ 1.73
CHMP6-204ENST00000572778 ADARB2Q9NS39 739 aaKnown RBP25.86■■□□□ 1.73
CHMP6-204ENST00000572778 CNOT7Q9UIV1 285 aaKnown RBP25.86■■□□□ 1.73
CHMP6-204ENST00000572778 RIPOR2Q9Y4F9 1068 aa25.86■■□□□ 1.73
CHMP6-204ENST00000572778 USP50Q70EL3 339 aaPredicted RBP25.85■■□□□ 1.73
CHMP6-204ENST00000572778 USP17L3A6NCW0 530 aa25.84■■□□□ 1.73
CHMP6-204ENST00000572778 USP17L4A6NCW7 530 aa25.84■■□□□ 1.73
CHMP6-204ENST00000572778 H7C1D1 291 aa25.84■■□□□ 1.73
CHMP6-204ENST00000572778 VIL1P09327 827 aaKnown RBP25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms