RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 A0A1B0GUL7 405 aa7.44□□□□□ -1.22
TRAPPC1-204ENST00000571947 GNPATO15228 680 aa7.44□□□□□ -1.22
TRAPPC1-204ENST00000571947 HCLS1P14317 486 aaPredicted RBP7.44□□□□□ -1.22
TRAPPC1-204ENST00000571947 MCCP23508 829 aa7.44□□□□□ -1.22
TRAPPC1-204ENST00000571947 ANAPC15P60006 121 aa7.44□□□□□ -1.22
TRAPPC1-204ENST00000571947 TIMM10P62072 90 aa7.44□□□□□ -1.22
TRAPPC1-204ENST00000571947 LDHAL6AQ6ZMR3 332 aa7.44□□□□□ -1.22
TRAPPC1-204ENST00000571947 TICAM2Q86XR7 235 aa7.44□□□□□ -1.22
TRAPPC1-204ENST00000571947 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.44□□□□□ -1.22
TRAPPC1-204ENST00000571947 NEUROD6Q96NK8 337 aa7.44□□□□□ -1.22
TRAPPC1-204ENST00000571947 IL25Q9H293 177 aa7.44□□□□□ -1.22
TRAPPC1-204ENST00000571947 ANO2Q9NQ90 1003 aa7.44□□□□□ -1.22
TRAPPC1-204ENST00000571947 SNRKQ9NRH2 765 aa7.44□□□□□ -1.22
TRAPPC1-204ENST00000571947 RAD50Q92878 1312 aa7.44□□□□□ -1.22
TRAPPC1-204ENST00000571947 ABCC12Q96J65 1359 aa7.44□□□□□ -1.22
TRAPPC1-204ENST00000571947 NRXN2Q9P2S2 1712 aa7.44□□□□□ -1.22
TRAPPC1-204ENST00000571947 FAM177BA6PVY3 158 aa7.43□□□□□ -1.22
TRAPPC1-204ENST00000571947 ZPR1O75312 459 aa7.43□□□□□ -1.22
TRAPPC1-204ENST00000571947 HMGB2P26583 209 aaKnown RBP7.43□□□□□ -1.22
TRAPPC1-204ENST00000571947 HSPA4P34932 840 aa7.43□□□□□ -1.22
TRAPPC1-204ENST00000571947 NMIQ13287 307 aaPredicted RBP7.43□□□□□ -1.22
TRAPPC1-204ENST00000571947 CCDC152Q4G0S7 254 aa7.43□□□□□ -1.22
TRAPPC1-204ENST00000571947 METTL24Q5JXM2 366 aa7.43□□□□□ -1.22
TRAPPC1-204ENST00000571947 SLC27A3Q5K4L6 730 aa7.43□□□□□ -1.22
TRAPPC1-204ENST00000571947 SLC10A5Q5PT55 438 aa7.43□□□□□ -1.22
TRAPPC1-204ENST00000571947 USPL1Q5W0Q7 1092 aa7.43□□□□□ -1.22
TRAPPC1-204ENST00000571947 TBC1D9BQ66K14 1250 aa7.43□□□□□ -1.22
TRAPPC1-204ENST00000571947 CWC27Q6UX04 472 aaKnown RBP7.43□□□□□ -1.22
TRAPPC1-204ENST00000571947 KIAA1211Q6ZU35 1233 aa7.43□□□□□ -1.22
TRAPPC1-204ENST00000571947 VGLL2Q8N8G2 317 aa7.43□□□□□ -1.22
TRAPPC1-204ENST00000571947 IL27Q8NEV9 243 aa7.43□□□□□ -1.22
TRAPPC1-204ENST00000571947 FSD1Q9BTV5 496 aa7.43□□□□□ -1.22
TRAPPC1-204ENST00000571947 NYXQ9GZU5 481 aa7.43□□□□□ -1.22
TRAPPC1-204ENST00000571947 LSG1Q9H089 658 aaKnown RBP7.43□□□□□ -1.22
TRAPPC1-204ENST00000571947 CNNM1Q9NRU3 951 aa7.43□□□□□ -1.22
TRAPPC1-204ENST00000571947 MROH5Q6ZUA9 1318 aa7.43□□□□□ -1.22
TRAPPC1-204ENST00000571947 MAST2Q6P0Q8 1798 aa7.42□□□□□ -1.22
TRAPPC1-204ENST00000571947 K7ELQ4 463 aaPredicted RBP7.42□□□□□ -1.22
TRAPPC1-204ENST00000571947 IFIT1P09914 478 aaKnown RBP7.42□□□□□ -1.22
TRAPPC1-204ENST00000571947 ADORA1P30542 326 aa7.42□□□□□ -1.22
TRAPPC1-204ENST00000571947 SF3B3Q15393 1217 aaKnown RBP7.42□□□□□ -1.22
TRAPPC1-204ENST00000571947 ATP2B3Q16720 1220 aa7.42□□□□□ -1.22
TRAPPC1-204ENST00000571947 ERFEQ4G0M1 354 aa7.42□□□□□ -1.22
TRAPPC1-204ENST00000571947 CCDC158Q5M9N0 1113 aa7.42□□□□□ -1.22
TRAPPC1-204ENST00000571947 TRAPPC3LQ5T215 181 aa7.42□□□□□ -1.22
TRAPPC1-204ENST00000571947 SMIM5Q71RC9 77 aa7.42□□□□□ -1.22
TRAPPC1-204ENST00000571947 KBTBD3Q8NAB2 608 aa7.42□□□□□ -1.22
TRAPPC1-204ENST00000571947 ARHGEF1Q92888 912 aaKnown RBP7.42□□□□□ -1.22
TRAPPC1-204ENST00000571947 EDC3Q96F86 508 aaKnown RBP7.42□□□□□ -1.22
TRAPPC1-204ENST00000571947 XAGE2Q96GT9 111 aa7.42□□□□□ -1.22
TRAPPC1-204ENST00000571947 SETDB2Q96T68 719 aa7.42□□□□□ -1.22
TRAPPC1-204ENST00000571947 LRRC4BQ9NT99 713 aa7.42□□□□□ -1.22
TRAPPC1-204ENST00000571947 SRP68Q9UHB9 627 aaKnown RBP7.42□□□□□ -1.22
TRAPPC1-204ENST00000571947 MED23Q9ULK4 1368 aa7.42□□□□□ -1.22
TRAPPC1-204ENST00000571947 LRRC37AA6NMS7 1700 aa7.41□□□□□ -1.22
TRAPPC1-204ENST00000571947 CDK5RAP2Q96SN8 1893 aa7.41□□□□□ -1.22
TRAPPC1-204ENST00000571947 ST18O60284 1047 aa7.41□□□□□ -1.22
TRAPPC1-204ENST00000571947 TRIM37O94972 964 aa7.41□□□□□ -1.22
TRAPPC1-204ENST00000571947 PDE8BO95263 885 aa7.41□□□□□ -1.22
TRAPPC1-204ENST00000571947 CD2BP2O95400 341 aaKnown RBP7.41□□□□□ -1.22
TRAPPC1-204ENST00000571947 FGFR2P21802 821 aa7.41□□□□□ -1.22
TRAPPC1-204ENST00000571947 RFC4P35249 363 aa7.41□□□□□ -1.22
TRAPPC1-204ENST00000571947 IGHMBP2P38935 993 aaKnown RBP7.41□□□□□ -1.22
TRAPPC1-204ENST00000571947 TTC39AQ5SRH9 613 aa7.41□□□□□ -1.22
TRAPPC1-204ENST00000571947 GORABQ5T7V8 394 aa7.41□□□□□ -1.22
TRAPPC1-204ENST00000571947 AMIGO3Q86WK7 504 aa7.41□□□□□ -1.22
TRAPPC1-204ENST00000571947 KCNB2Q92953 911 aa7.41□□□□□ -1.22
TRAPPC1-204ENST00000571947 ZNF512BQ96KM6 892 aaPredicted RBP7.41□□□□□ -1.22
TRAPPC1-204ENST00000571947 FAM227BQ96M60 508 aa7.41□□□□□ -1.22
TRAPPC1-204ENST00000571947 DNAJC2Q99543 621 aaKnown RBP7.41□□□□□ -1.22
TRAPPC1-204ENST00000571947 MPHOSPH8Q99549 860 aa7.41□□□□□ -1.22
TRAPPC1-204ENST00000571947 ANTXR1Q9H6X2 564 aa7.41□□□□□ -1.22
TRAPPC1-204ENST00000571947 SEC31BQ9NQW1 1179 aa7.41□□□□□ -1.22
TRAPPC1-204ENST00000571947 PAG1Q9NWQ8 432 aa7.41□□□□□ -1.22
TRAPPC1-204ENST00000571947 PALD1Q9ULE6 856 aa7.41□□□□□ -1.22
TRAPPC1-204ENST00000571947 CCDC171Q6TFL3 1326 aa7.41□□□□□ -1.22
TRAPPC1-204ENST00000571947 MYH15Q9Y2K3 1946 aa7.4□□□□□ -1.22
TRAPPC1-204ENST00000571947 A0A0D9SFI3 127 aa7.4□□□□□ -1.22
TRAPPC1-204ENST00000571947 GOLIM4O00461 696 aa7.4□□□□□ -1.22
TRAPPC1-204ENST00000571947 PTH1RQ03431 593 aa7.4□□□□□ -1.22
TRAPPC1-204ENST00000571947 PUM3Q15397 648 aaKnown RBP7.4□□□□□ -1.22
TRAPPC1-204ENST00000571947 TPTE2Q6XPS3 522 aa7.4□□□□□ -1.22
TRAPPC1-204ENST00000571947 BICDL1Q6ZP65 573 aa7.4□□□□□ -1.22
TRAPPC1-204ENST00000571947 DDX46Q7L014 1031 aaKnown RBP7.4□□□□□ -1.22
TRAPPC1-204ENST00000571947 MAP4K1Q92918 833 aa7.4□□□□□ -1.22
TRAPPC1-204ENST00000571947 CDC5LQ99459 802 aaKnown RBP7.4□□□□□ -1.22
TRAPPC1-204ENST00000571947 SNX14Q9Y5W7 946 aa7.4□□□□□ -1.22
TRAPPC1-204ENST00000571947 NDUFB9Q9Y6M9 179 aa7.4□□□□□ -1.22
TRAPPC1-204ENST00000571947 BAZ2AQ9UIF9 1905 aaKnown RBP7.4□□□□□ -1.23
TRAPPC1-204ENST00000571947 MYH2Q9UKX2 1941 aa7.4□□□□□ -1.23
TRAPPC1-204ENST00000571947 CARMIL3Q8ND23 1372 aa7.39□□□□□ -1.23
TRAPPC1-204ENST00000571947 PLSCR1O15162 318 aa7.39□□□□□ -1.23
TRAPPC1-204ENST00000571947 UQCRFS1P1P0C7P4 283 aa7.39□□□□□ -1.23
TRAPPC1-204ENST00000571947 SLC5A1P13866 664 aa7.39□□□□□ -1.23
TRAPPC1-204ENST00000571947 SSFA2P28290 1259 aa7.39□□□□□ -1.23
TRAPPC1-204ENST00000571947 RXRBP28702 533 aa7.39□□□□□ -1.23
TRAPPC1-204ENST00000571947 GTF2E1P29083 439 aaPredicted RBP7.39□□□□□ -1.23
TRAPPC1-204ENST00000571947 MCM2P49736 904 aa7.39□□□□□ -1.23
TRAPPC1-204ENST00000571947 NEK4P51957 841 aa7.39□□□□□ -1.23
TRAPPC1-204ENST00000571947 NECTIN1Q15223 517 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms