RNA–Protein interactions for RNA: ENST00000571880.1

RAB40B-205, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,020 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-205ENST00000571880 CCDC152Q4G0S7 254 aa21.32■■□□□ 1
RAB40B-205ENST00000571880 KSR2Q6VAB6 950 aa21.32■■□□□ 1
RAB40B-205ENST00000571880 MICALL2Q8IY33 904 aa21.32■■□□□ 1
RAB40B-205ENST00000571880 TNS4Q8IZW8 715 aa21.32■■□□□ 1
RAB40B-205ENST00000571880 TBC1D16Q8TBP0 767 aa21.32■■□□□ 1
RAB40B-205ENST00000571880 RTL9Q8NET4 1388 aa21.32■■□□□ 1
RAB40B-205ENST00000571880 FOXN1O15353 648 aa21.31■■□□□ 1
RAB40B-205ENST00000571880 ZNF408Q9H9D4 720 aa21.31■■□□□ 1
RAB40B-205ENST00000571880 ANKIB1Q9P2G1 1089 aa21.31■■□□□ 1
RAB40B-205ENST00000571880 HIRAP54198 1017 aaPredicted RBP21.3■■□□□ 1
RAB40B-205ENST00000571880 CTSWP56202 376 aa21.3■■□□□ 1
RAB40B-205ENST00000571880 CNOT7Q9UIV1 285 aaKnown RBP21.3■■□□□ 1
RAB40B-205ENST00000571880 RASSF10A6NK89 507 aa21.29■■□□□ 1
RAB40B-205ENST00000571880 SLC4A2P04920 1241 aa21.29■■□□□ 1
RAB40B-205ENST00000571880 DEFB115Q30KQ5 88 aa21.29■■□□□ 1
RAB40B-205ENST00000571880 DLK2Q6UY11 383 aa21.29■■□□□ 1
RAB40B-205ENST00000571880 SAMD7Q7Z3H4 446 aa21.29■■□□□ 1
RAB40B-205ENST00000571880 EYA3Q99504 573 aa21.29■■□□□ 1
RAB40B-205ENST00000571880 CDHR2Q9BYE9 1310 aa21.29■■□□□ 1
RAB40B-205ENST00000571880 NEURL1BA8MQ27 555 aa21.28■■□□□ 1
RAB40B-205ENST00000571880 EGFRP00533 1210 aa21.28■■□□□ 1
RAB40B-205ENST00000571880 NEXNQ0ZGT2 675 aa21.28■■□□□ 1
RAB40B-205ENST00000571880 TBC1D10BQ4KMP7 808 aaPredicted RBP21.28■■□□□ 1
RAB40B-205ENST00000571880 CST9Q5W186 159 aa21.28■■□□□ 1
RAB40B-205ENST00000571880 UBE3BQ7Z3V4 1068 aa21.28■■□□□ 1
RAB40B-205ENST00000571880 FAM9BQ8IZU0 186 aa21.28■■□□□ 1
RAB40B-205ENST00000571880 IL16Q14005 1332 aa21.28■■□□□ 1
RAB40B-205ENST00000571880 RBM26Q5T8P6 1007 aaKnown RBP21.27■■□□□ 1
RAB40B-205ENST00000571880 CYP4F22Q6NT55 531 aa21.27■■□□□ 1
RAB40B-205ENST00000571880 ANKRD18AQ8IVF6 992 aa21.27■■□□□ 1
RAB40B-205ENST00000571880 GREM2Q9H772 168 aa21.27■■□□□ 1
RAB40B-205ENST00000571880 GGA1Q9UJY5 639 aa21.27■■□□□ 1
RAB40B-205ENST00000571880 WDR33Q9C0J8 1336 aaKnown RBP21.27■□□□□ 0.99
RAB40B-205ENST00000571880 WTIPA6NIX2 430 aaPredicted RBP21.26■□□□□ 0.99
RAB40B-205ENST00000571880 G3V3G9 751 aa21.26■□□□□ 0.99
RAB40B-205ENST00000571880 CELF2O95319 508 aaKnown RBP21.26■□□□□ 0.99
RAB40B-205ENST00000571880 HSP90B1P14625 803 aaKnown RBP21.26■□□□□ 0.99
RAB40B-205ENST00000571880 EXOSC9Q06265 439 aaKnown RBP21.26■□□□□ 0.99
RAB40B-205ENST00000571880 FLIIQ13045 1269 aa21.26■□□□□ 0.99
RAB40B-205ENST00000571880 FKBP5Q13451 457 aaPredicted RBP21.26■□□□□ 0.99
RAB40B-205ENST00000571880 DCAF8Q5TAQ9 597 aa21.26■□□□□ 0.99
RAB40B-205ENST00000571880 H7C1D1 291 aa21.25■□□□□ 0.99
RAB40B-205ENST00000571880 AIDAQ96BJ3 306 aa21.25■□□□□ 0.99
RAB40B-205ENST00000571880 CAPNS2Q96L46 248 aa21.25■□□□□ 0.99
RAB40B-205ENST00000571880 CHMP4AQ9BY43 222 aa21.25■□□□□ 0.99
RAB40B-205ENST00000571880 ZC3H12CQ9C0D7 883 aaKnown RBP21.25■□□□□ 0.99
RAB40B-205ENST00000571880 SPINK5Q9NQ38 1064 aaPredicted RBP21.25■□□□□ 0.99
RAB40B-205ENST00000571880 PODXL2Q9NZ53 605 aa21.24■□□□□ 0.99
RAB40B-205ENST00000571880 USP48Q86UV5 1035 aa21.23■□□□□ 0.99
RAB40B-205ENST00000571880 TTLL11Q8NHH1 800 aa21.23■□□□□ 0.99
RAB40B-205ENST00000571880 XDHP47989 1333 aa21.23■□□□□ 0.99
RAB40B-205ENST00000571880 FAM161AQ3B820 660 aa21.22■□□□□ 0.99
RAB40B-205ENST00000571880 DNAAF4Q8WXU2 420 aa21.22■□□□□ 0.99
RAB40B-205ENST00000571880 CDC5LQ99459 802 aaKnown RBP21.22■□□□□ 0.99
RAB40B-205ENST00000571880 TLL2Q9Y6L7 1015 aa21.22■□□□□ 0.99
RAB40B-205ENST00000571880 ASTN2O75129 1339 aaPredicted RBP21.22■□□□□ 0.99
RAB40B-205ENST00000571880 ADM5C9JUS6 153 aa21.21■□□□□ 0.99
RAB40B-205ENST00000571880 F6X3S4 739 aa21.21■□□□□ 0.99
RAB40B-205ENST00000571880 AOC2O75106 756 aa21.21■□□□□ 0.99
RAB40B-205ENST00000571880 WBP1LQ9NX94 342 aa21.21■□□□□ 0.99
RAB40B-205ENST00000571880 VAMP4O75379 141 aa21.2■□□□□ 0.98
RAB40B-205ENST00000571880 LBX1P52954 281 aa21.2■□□□□ 0.98
RAB40B-205ENST00000571880 GCKRQ14397 625 aa21.2■□□□□ 0.98
RAB40B-205ENST00000571880 KIF4BQ2VIQ3 1234 aa21.2■□□□□ 0.98
RAB40B-205ENST00000571880 DPF2Q92785 391 aa21.2■□□□□ 0.98
RAB40B-205ENST00000571880 H7C1W4 665 aa21.19■□□□□ 0.98
RAB40B-205ENST00000571880 CTCFP49711 727 aaPredicted RBP21.19■□□□□ 0.98
RAB40B-205ENST00000571880 WDR63Q8IWG1 891 aa21.19■□□□□ 0.98
RAB40B-205ENST00000571880 FBXW7Q969H0 707 aa21.19■□□□□ 0.98
RAB40B-205ENST00000571880 PGAP2Q9UHJ9 254 aa21.19■□□□□ 0.98
RAB40B-205ENST00000571880 TSKSQ9UJT2 592 aa21.19■□□□□ 0.98
RAB40B-205ENST00000571880 RPS12P25398 132 aaKnown RBP21.18■□□□□ 0.98
RAB40B-205ENST00000571880 KLRK1P26718 216 aa21.18■□□□□ 0.98
RAB40B-205ENST00000571880 CDC37L1Q7L3B6 337 aa21.18■□□□□ 0.98
RAB40B-205ENST00000571880 KRT26Q7Z3Y9 468 aa21.18■□□□□ 0.98
RAB40B-205ENST00000571880 ZC3H15Q8WU90 426 aaKnown RBP21.18■□□□□ 0.98
RAB40B-205ENST00000571880 GGA3Q9NZ52 723 aa21.18■□□□□ 0.98
RAB40B-205ENST00000571880 MINPP1Q9UNW1 487 aa21.18■□□□□ 0.98
RAB40B-205ENST00000571880 CASP8AP2Q9UKL3 1982 aa21.17■□□□□ 0.98
RAB40B-205ENST00000571880 VIL1P09327 827 aaKnown RBP21.17■□□□□ 0.98
RAB40B-205ENST00000571880 HSPA8P11142 646 aaKnown RBP21.17■□□□□ 0.98
RAB40B-205ENST00000571880 ITGA6P23229 1130 aa21.17■□□□□ 0.98
RAB40B-205ENST00000571880 ATP2B4P23634 1241 aa21.17■□□□□ 0.98
RAB40B-205ENST00000571880 ECE1P42892 770 aa21.17■□□□□ 0.98
RAB40B-205ENST00000571880 CASP7P55210 303 aa21.17■□□□□ 0.98
RAB40B-205ENST00000571880 SAPCD2Q86UD0 394 aa21.17■□□□□ 0.98
RAB40B-205ENST00000571880 MXD3Q9BW11 206 aa21.17■□□□□ 0.98
RAB40B-205ENST00000571880 MYH16Q9H6N6 1097 aa21.17■□□□□ 0.98
RAB40B-205ENST00000571880 MED23Q9ULK4 1368 aa21.16■□□□□ 0.98
RAB40B-205ENST00000571880 RSBN1LQ6PCB5 846 aaPredicted RBP21.16■□□□□ 0.98
RAB40B-205ENST00000571880 LINS1Q8NG48 757 aa21.16■□□□□ 0.98
RAB40B-205ENST00000571880 BSDC1Q9NW68 430 aaPredicted RBP21.16■□□□□ 0.98
RAB40B-205ENST00000571880 SCAF8Q9UPN6 1271 aaKnown RBP21.16■□□□□ 0.98
RAB40B-205ENST00000571880 CHMP3Q9Y3E7 222 aa21.16■□□□□ 0.98
RAB40B-205ENST00000571880 IGHMBP2P38935 993 aaKnown RBP21.15■□□□□ 0.98
RAB40B-205ENST00000571880 CCT4P50991 539 aaKnown RBP21.15■□□□□ 0.98
RAB40B-205ENST00000571880 NCBP3Q53F19 620 aaKnown RBP21.15■□□□□ 0.98
RAB40B-205ENST00000571880 TXNRD3Q86VQ6 643 aa21.15■□□□□ 0.98
RAB40B-205ENST00000571880 DCPSQ96C86 337 aaKnown RBP21.15■□□□□ 0.98
RAB40B-205ENST00000571880 MAP2K1Q02750 393 aaPredicted RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms