RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 DCAF8Q5TAQ9 597 aa20.05■□□□□ 0.8
TSR1-202ENST00000571806 MYD88Q99836 296 aa20.05■□□□□ 0.8
TSR1-202ENST00000571806 CWC25Q9NXE8 425 aaPredicted RBP20.05■□□□□ 0.8
TSR1-202ENST00000571806 ANKIB1Q9P2G1 1089 aa20.05■□□□□ 0.8
TSR1-202ENST00000571806 ZBTB12Q9Y330 459 aaPredicted RBP20.05■□□□□ 0.8
TSR1-202ENST00000571806 ELL2O00472 640 aaPredicted RBP20.04■□□□□ 0.8
TSR1-202ENST00000571806 BRPF1P55201 1214 aaPredicted RBP20.04■□□□□ 0.8
TSR1-202ENST00000571806 DCPSQ96C86 337 aaKnown RBP20.04■□□□□ 0.8
TSR1-202ENST00000571806 METTL22Q9BUU2 404 aaPredicted RBP20.04■□□□□ 0.8
TSR1-202ENST00000571806 ZNF408Q9H9D4 720 aa20.04■□□□□ 0.8
TSR1-202ENST00000571806 SAMD7Q7Z3H4 446 aa20.03■□□□□ 0.8
TSR1-202ENST00000571806 GGA1Q9UJY5 639 aa20.03■□□□□ 0.8
TSR1-202ENST00000571806 VIL1P09327 827 aaKnown RBP20.02■□□□□ 0.8
TSR1-202ENST00000571806 NOGQ13253 232 aa20.02■□□□□ 0.8
TSR1-202ENST00000571806 DOK7Q18PE1 504 aa20.02■□□□□ 0.8
TSR1-202ENST00000571806 KRT26Q7Z3Y9 468 aa20.02■□□□□ 0.8
TSR1-202ENST00000571806 USP48Q86UV5 1035 aa20.02■□□□□ 0.8
TSR1-202ENST00000571806 C8orf58Q8NAV2 365 aa20.02■□□□□ 0.8
TSR1-202ENST00000571806 SEC31BQ9NQW1 1179 aa20.02■□□□□ 0.8
TSR1-202ENST00000571806 SHTN1A0MZ66 631 aa20.01■□□□□ 0.79
TSR1-202ENST00000571806 AOC2O75106 756 aa20.01■□□□□ 0.79
TSR1-202ENST00000571806 UFL1O94874 794 aa20.01■□□□□ 0.79
TSR1-202ENST00000571806 TBC1D10BQ4KMP7 808 aaPredicted RBP20.01■□□□□ 0.79
TSR1-202ENST00000571806 ANKRD18AQ8IVF6 992 aa20.01■□□□□ 0.79
TSR1-202ENST00000571806 RTL9Q8NET4 1388 aa20■□□□□ 0.79
TSR1-202ENST00000571806 KSR2Q6VAB6 950 aa20■□□□□ 0.79
TSR1-202ENST00000571806 C2orf69Q8N8R5 385 aa20■□□□□ 0.79
TSR1-202ENST00000571806 AGBL3Q8NEM8 1001 aa20■□□□□ 0.79
TSR1-202ENST00000571806 ABHD8Q96I13 439 aa20■□□□□ 0.79
TSR1-202ENST00000571806 CDC5LQ99459 802 aaKnown RBP20■□□□□ 0.79
TSR1-202ENST00000571806 STK31Q9BXU1 1019 aa20■□□□□ 0.79
TSR1-202ENST00000571806 XDHP47989 1333 aa20■□□□□ 0.79
TSR1-202ENST00000571806 HUNKP57058 714 aa19.99■□□□□ 0.79
TSR1-202ENST00000571806 NEXNQ0ZGT2 675 aa19.99■□□□□ 0.79
TSR1-202ENST00000571806 CCDC27Q2M243 656 aa19.99■□□□□ 0.79
TSR1-202ENST00000571806 KCNQ5Q9NR82 932 aa19.99■□□□□ 0.79
TSR1-202ENST00000571806 MAP3K2Q9Y2U5 619 aa19.99■□□□□ 0.79
TSR1-202ENST00000571806 ZNF609O15014 1411 aa19.99■□□□□ 0.79
TSR1-202ENST00000571806 COL4A1P02462 1669 aa19.98■□□□□ 0.79
TSR1-202ENST00000571806 ATP2B4P23634 1241 aa19.98■□□□□ 0.79
TSR1-202ENST00000571806 KIF4BQ2VIQ3 1234 aa19.98■□□□□ 0.79
TSR1-202ENST00000571806 SULF1Q8IWU6 871 aa19.98■□□□□ 0.79
TSR1-202ENST00000571806 CCDC102AQ96A19 550 aa19.98■□□□□ 0.79
TSR1-202ENST00000571806 RBM26Q5T8P6 1007 aaKnown RBP19.97■□□□□ 0.79
TSR1-202ENST00000571806 PODNQ7Z5L7 613 aa19.97■□□□□ 0.79
TSR1-202ENST00000571806 GBA2Q9HCG7 927 aaPredicted RBP19.97■□□□□ 0.79
TSR1-202ENST00000571806 PI4KAP2A4QPH2 592 aa19.96■□□□□ 0.79
TSR1-202ENST00000571806 EGFRP00533 1210 aa19.96■□□□□ 0.79
TSR1-202ENST00000571806 CTSWP56202 376 aa19.96■□□□□ 0.79
TSR1-202ENST00000571806 ZNF280AP59817 542 aaPredicted RBP19.96■□□□□ 0.79
TSR1-202ENST00000571806 NCBP3Q53F19 620 aaKnown RBP19.96■□□□□ 0.79
TSR1-202ENST00000571806 RGMBQ6NW40 437 aa19.96■□□□□ 0.79
TSR1-202ENST00000571806 RSBN1LQ6PCB5 846 aaPredicted RBP19.96■□□□□ 0.79
TSR1-202ENST00000571806 PI4KAP1Q8N8J0 262 aa19.96■□□□□ 0.79
TSR1-202ENST00000571806 TSPYL6Q8N831 410 aa19.95■□□□□ 0.78
TSR1-202ENST00000571806 BSDC1Q9NW68 430 aaPredicted RBP19.95■□□□□ 0.78
TSR1-202ENST00000571806 TTLL11Q8NHH1 800 aa19.94■□□□□ 0.78
TSR1-202ENST00000571806 SCN9AQ15858 1988 aa19.94■□□□□ 0.78
TSR1-202ENST00000571806 USP17L3A6NCW0 530 aa19.93■□□□□ 0.78
TSR1-202ENST00000571806 USP17L4A6NCW7 530 aa19.93■□□□□ 0.78
TSR1-202ENST00000571806 IGKV5-2P06315 115 aa19.93■□□□□ 0.78
TSR1-202ENST00000571806 USP17L8P0C7I0 530 aa19.93■□□□□ 0.78
TSR1-202ENST00000571806 MMP14P50281 582 aa19.93■□□□□ 0.78
TSR1-202ENST00000571806 USP17L1Q7RTZ2 530 aa19.93■□□□□ 0.78
TSR1-202ENST00000571806 JARID2Q92833 1246 aaPredicted RBP19.93■□□□□ 0.78
TSR1-202ENST00000571806 CCDC85AQ96PX6 553 aaPredicted RBP19.93■□□□□ 0.78
TSR1-202ENST00000571806 GGA3Q9NZ52 723 aa19.93■□□□□ 0.78
TSR1-202ENST00000571806 TSKSQ9UJT2 592 aa19.93■□□□□ 0.78
TSR1-202ENST00000571806 POLR2AP24928 1970 aaKnown RBP19.93■□□□□ 0.78
TSR1-202ENST00000571806 IL16Q14005 1332 aa19.93■□□□□ 0.78
TSR1-202ENST00000571806 PSME4Q14997 1843 aa19.92■□□□□ 0.78
TSR1-202ENST00000571806 ADM5C9JUS6 153 aa19.92■□□□□ 0.78
TSR1-202ENST00000571806 ZNF157P51786 506 aaPredicted RBP19.92■□□□□ 0.78
TSR1-202ENST00000571806 FKBP1BP68106 108 aa19.92■□□□□ 0.78
TSR1-202ENST00000571806 TWISTNBQ3B726 338 aaPredicted RBP19.92■□□□□ 0.78
TSR1-202ENST00000571806 WWC1Q8IX03 1113 aa19.92■□□□□ 0.78
TSR1-202ENST00000571806 REM2Q8IYK8 340 aaPredicted RBP19.92■□□□□ 0.78
TSR1-202ENST00000571806 SAGE1Q9NXZ1 904 aa19.92■□□□□ 0.78
TSR1-202ENST00000571806 PITPNM2Q9BZ72 1349 aa19.92■□□□□ 0.78
TSR1-202ENST00000571806 MED23Q9ULK4 1368 aa19.92■□□□□ 0.78
TSR1-202ENST00000571806 NEURL1BA8MQ27 555 aa19.91■□□□□ 0.78
TSR1-202ENST00000571806 FAM155AB1AL88 458 aaPredicted RBP19.91■□□□□ 0.78
TSR1-202ENST00000571806 SCARF1Q14162 830 aa19.91■□□□□ 0.78
TSR1-202ENST00000571806 TSR2Q969E8 191 aaKnown RBP19.91■□□□□ 0.78
TSR1-202ENST00000571806 GMLQ99445 158 aa19.91■□□□□ 0.78
TSR1-202ENST00000571806 MYOZ2Q9NPC6 264 aa19.91■□□□□ 0.78
TSR1-202ENST00000571806 MINPP1Q9UNW1 487 aa19.91■□□□□ 0.78
TSR1-202ENST00000571806 MYH3P11055 1940 aa19.91■□□□□ 0.78
TSR1-202ENST00000571806 H7C1W4 665 aa19.9■□□□□ 0.78
TSR1-202ENST00000571806 SLC4A2P04920 1241 aa19.9■□□□□ 0.78
TSR1-202ENST00000571806 LEMD3Q9Y2U8 911 aa19.9■□□□□ 0.78
TSR1-202ENST00000571806 MYO3BQ8WXR4 1341 aa19.9■□□□□ 0.78
TSR1-202ENST00000571806 IGHMBP2P38935 993 aaKnown RBP19.89■□□□□ 0.77
TSR1-202ENST00000571806 CCT4P50991 539 aaKnown RBP19.89■□□□□ 0.77
TSR1-202ENST00000571806 CWF19L2Q2TBE0 894 aaKnown RBP19.89■□□□□ 0.77
TSR1-202ENST00000571806 ANGEL2Q5VTE6 544 aaKnown RBP19.89■□□□□ 0.77
TSR1-202ENST00000571806 DLK2Q6UY11 383 aa19.89■□□□□ 0.77
TSR1-202ENST00000571806 OGFOD1Q8N543 542 aa19.89■□□□□ 0.77
TSR1-202ENST00000571806 CDCA5Q96FF9 252 aa19.89■□□□□ 0.77
TSR1-202ENST00000571806 PLA2G12BQ9BX93 195 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms