RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 DBNDD1Q9H9R9 158 aa18.45■□□□□ 0.54
LITAF-208ENST00000571627 SMC4Q9NTJ3 1288 aa18.45■□□□□ 0.54
LITAF-208ENST00000571627 PODXL2Q9NZ53 605 aa18.45■□□□□ 0.54
LITAF-208ENST00000571627 ALDH1L1O75891 902 aa18.44■□□□□ 0.54
LITAF-208ENST00000571627 CSF1RP07333 972 aa18.44■□□□□ 0.54
LITAF-208ENST00000571627 FOXO4P98177 505 aa18.44■□□□□ 0.54
LITAF-208ENST00000571627 DOK7Q18PE1 504 aa18.44■□□□□ 0.54
LITAF-208ENST00000571627 EPHA10Q5JZY3 1008 aa18.44■□□□□ 0.54
LITAF-208ENST00000571627 CHADLQ6NUI6 762 aa18.44■□□□□ 0.54
LITAF-208ENST00000571627 GGA1Q9UJY5 639 aa18.44■□□□□ 0.54
LITAF-208ENST00000571627 A0A1B0GUL6 1792 aa18.44■□□□□ 0.54
LITAF-208ENST00000571627 PTPRCP08575 1304 aa18.44■□□□□ 0.54
LITAF-208ENST00000571627 WTIPA6NIX2 430 aaPredicted RBP18.43■□□□□ 0.54
LITAF-208ENST00000571627 LMOD1P29536 600 aaPredicted RBP18.43■□□□□ 0.54
LITAF-208ENST00000571627 EPS15P42566 896 aa18.43■□□□□ 0.54
LITAF-208ENST00000571627 HNRNPUQ00839 825 aaKnown RBP eCLIP18.43■□□□□ 0.54
LITAF-208ENST00000571627 ALDH1L2Q3SY69 923 aa18.43■□□□□ 0.54
LITAF-208ENST00000571627 CIAPIN1Q6FI81 312 aa18.43■□□□□ 0.54
LITAF-208ENST00000571627 EYA3Q99504 573 aa18.43■□□□□ 0.54
LITAF-208ENST00000571627 BSDC1Q9NW68 430 aaPredicted RBP18.43■□□□□ 0.54
LITAF-208ENST00000571627 C9orf78Q9NZ63 289 aaPredicted RBP18.43■□□□□ 0.54
LITAF-208ENST00000571627 CHMP3Q9Y3E7 222 aa18.43■□□□□ 0.54
LITAF-208ENST00000571627 XDHP47989 1333 aa18.43■□□□□ 0.54
LITAF-208ENST00000571627 IGHMBP2P38935 993 aaKnown RBP18.42■□□□□ 0.54
LITAF-208ENST00000571627 GMPSP49915 693 aaPredicted RBP18.42■□□□□ 0.54
LITAF-208ENST00000571627 LDHDQ86WU2 507 aa18.42■□□□□ 0.54
LITAF-208ENST00000571627 MINPP1Q9UNW1 487 aa18.42■□□□□ 0.54
LITAF-208ENST00000571627 ECE2O60344 883 aa18.41■□□□□ 0.54
LITAF-208ENST00000571627 CT47B1P0C2W7 299 aaPredicted RBP18.41■□□□□ 0.54
LITAF-208ENST00000571627 LMBR1LQ6UX01 489 aa18.41■□□□□ 0.54
LITAF-208ENST00000571627 ZC3H12CQ9C0D7 883 aaKnown RBP18.41■□□□□ 0.54
LITAF-208ENST00000571627 KCNQ5Q9NR82 932 aa18.41■□□□□ 0.54
LITAF-208ENST00000571627 CLEC11AQ9Y240 323 aa18.41■□□□□ 0.54
LITAF-208ENST00000571627 PSME4Q14997 1843 aa18.41■□□□□ 0.54
LITAF-208ENST00000571627 NBPF7P0C2Y1 421 aaPredicted RBP18.4■□□□□ 0.54
LITAF-208ENST00000571627 SUCLG2Q96I99 432 aa18.4■□□□□ 0.54
LITAF-208ENST00000571627 GPRC5DQ9NZD1 345 aa18.4■□□□□ 0.54
LITAF-208ENST00000571627 ANKRD18BA2A2Z9 1011 aa18.39■□□□□ 0.53
LITAF-208ENST00000571627 PSMD14O00487 310 aa18.39■□□□□ 0.53
LITAF-208ENST00000571627 ATP2B4P23634 1241 aa18.39■□□□□ 0.53
LITAF-208ENST00000571627 IFIT5Q13325 482 aaKnown RBP18.39■□□□□ 0.53
LITAF-208ENST00000571627 TNIP1Q15025 636 aa18.39■□□□□ 0.53
LITAF-208ENST00000571627 PNMA8AQ86V59 439 aaPredicted RBP18.39■□□□□ 0.53
LITAF-208ENST00000571627 MPHOSPH8Q99549 860 aa18.39■□□□□ 0.53
LITAF-208ENST00000571627 SHTN1A0MZ66 631 aa18.38■□□□□ 0.53
LITAF-208ENST00000571627 MAP1SQ66K74 1059 aaPredicted RBP18.38■□□□□ 0.53
LITAF-208ENST00000571627 KAZALD1Q96I82 304 aa18.38■□□□□ 0.53
LITAF-208ENST00000571627 ZBTB12Q9Y330 459 aaPredicted RBP18.38■□□□□ 0.53
LITAF-208ENST00000571627 G3V3G9 751 aa18.37■□□□□ 0.53
LITAF-208ENST00000571627 CCT4P50991 539 aaKnown RBP18.37■□□□□ 0.53
LITAF-208ENST00000571627 RARSP54136 660 aaKnown RBP18.37■□□□□ 0.53
LITAF-208ENST00000571627 DCAF8Q5TAQ9 597 aa18.37■□□□□ 0.53
LITAF-208ENST00000571627 ZNF594Q96JF6 807 aaPredicted RBP18.37■□□□□ 0.53
LITAF-208ENST00000571627 NOB1Q9ULX3 412 aaKnown RBP18.37■□□□□ 0.53
LITAF-208ENST00000571627 UTYO14607 1347 aa18.37■□□□□ 0.53
LITAF-208ENST00000571627 ZNF646O15015 1829 aaPredicted RBP18.37■□□□□ 0.53
LITAF-208ENST00000571627 CHRNDQ07001 517 aa18.36■□□□□ 0.53
LITAF-208ENST00000571627 DNAJC5GQ8N7S2 189 aa18.36■□□□□ 0.53
LITAF-208ENST00000571627 BICC1Q9H694 974 aaKnown RBP18.36■□□□□ 0.53
LITAF-208ENST00000571627 ADARB2Q9NS39 739 aaKnown RBP18.36■□□□□ 0.53
LITAF-208ENST00000571627 MED23Q9ULK4 1368 aa18.36■□□□□ 0.53
LITAF-208ENST00000571627 KLRK1P26718 216 aa18.35■□□□□ 0.53
LITAF-208ENST00000571627 CCDC57Q2TAC2 916 aa18.35■□□□□ 0.53
LITAF-208ENST00000571627 USP50Q70EL3 339 aaPredicted RBP18.35■□□□□ 0.53
LITAF-208ENST00000571627 HELBQ8NG08 1087 aaPredicted RBP18.35■□□□□ 0.53
LITAF-208ENST00000571627 ZBED9Q6R2W3 1325 aa18.34■□□□□ 0.53
LITAF-208ENST00000571627 PASKQ96RG2 1323 aa18.34■□□□□ 0.53
LITAF-208ENST00000571627 SNAP23O00161 211 aa18.34■□□□□ 0.53
LITAF-208ENST00000571627 ITGBL1O95965 494 aaPredicted RBP18.34■□□□□ 0.53
LITAF-208ENST00000571627 TAF7LQ5H9L4 462 aa18.34■□□□□ 0.53
LITAF-208ENST00000571627 TXNRD3Q86VQ6 643 aa18.34■□□□□ 0.53
LITAF-208ENST00000571627 MICALL2Q8IY33 904 aa18.34■□□□□ 0.53
LITAF-208ENST00000571627 CNTROBQ8N137 903 aa18.34■□□□□ 0.53
LITAF-208ENST00000571627 ANKRD2Q9GZV1 360 aa18.34■□□□□ 0.53
LITAF-208ENST00000571627 USP44Q9H0E7 712 aa18.34■□□□□ 0.53
LITAF-208ENST00000571627 CNOT7Q9UIV1 285 aaKnown RBP18.34■□□□□ 0.53
LITAF-208ENST00000571627 ZNF804BA4D1E1 1349 aa18.33■□□□□ 0.53
LITAF-208ENST00000571627 TAF5LO75529 589 aa18.33■□□□□ 0.52
LITAF-208ENST00000571627 ANKRD44Q8N8A2 993 aa18.33■□□□□ 0.52
LITAF-208ENST00000571627 TRPM4Q8TD43 1214 aa18.33■□□□□ 0.52
LITAF-208ENST00000571627 LEMD3Q9Y2U8 911 aa18.33■□□□□ 0.52
LITAF-208ENST00000571627 KCNJ4P48050 445 aa18.32■□□□□ 0.52
LITAF-208ENST00000571627 BRPF1P55201 1214 aaPredicted RBP18.32■□□□□ 0.52
LITAF-208ENST00000571627 LDHAL6AQ6ZMR3 332 aa18.32■□□□□ 0.52
LITAF-208ENST00000571627 API5Q9BZZ5 524 aaKnown RBP18.32■□□□□ 0.52
LITAF-208ENST00000571627 TRPM7Q96QT4 1865 aa18.31■□□□□ 0.52
LITAF-208ENST00000571627 KIF16BQ96L93 1317 aa18.31■□□□□ 0.52
LITAF-208ENST00000571627 VIL1P09327 827 aaKnown RBP18.31■□□□□ 0.52
LITAF-208ENST00000571627 HIRAP54198 1017 aaPredicted RBP18.31■□□□□ 0.52
LITAF-208ENST00000571627 FMR1Q06787 632 aaKnown RBP eCLIP18.31■□□□□ 0.52
LITAF-208ENST00000571627 RABL6Q3YEC7 729 aaPredicted RBP18.31■□□□□ 0.52
LITAF-208ENST00000571627 SAMD7Q7Z3H4 446 aa18.31■□□□□ 0.52
LITAF-208ENST00000571627 DPF2Q92785 391 aa18.31■□□□□ 0.52
LITAF-208ENST00000571627 CNNM1Q9NRU3 951 aa18.31■□□□□ 0.52
LITAF-208ENST00000571627 POLR2AP24928 1970 aaKnown RBP18.3■□□□□ 0.52
LITAF-208ENST00000571627 H7C1D1 291 aa18.3■□□□□ 0.52
LITAF-208ENST00000571627 PLIN1O60240 522 aa18.3■□□□□ 0.52
LITAF-208ENST00000571627 BCAR3O75815 825 aa18.3■□□□□ 0.52
LITAF-208ENST00000571627 EGFRP00533 1210 aa18.3■□□□□ 0.52
LITAF-208ENST00000571627 RPS12P25398 132 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms