RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 ZC3H12CQ9C0D7 883 aaKnown RBP24.67■■□□□ 1.54
SCARF1-204ENST00000570902 RTL9Q8NET4 1388 aa24.67■■□□□ 1.54
SCARF1-204ENST00000570902 SLC34A2O95436 690 aa24.66■■□□□ 1.54
SCARF1-204ENST00000570902 EGFRP00533 1210 aa24.66■■□□□ 1.54
SCARF1-204ENST00000570902 RTL5Q5HYW3 569 aaPredicted RBP24.66■■□□□ 1.54
SCARF1-204ENST00000570902 RBM26Q5T8P6 1007 aaKnown RBP24.66■■□□□ 1.54
SCARF1-204ENST00000570902 ZIC5Q96T25 663 aa24.66■■□□□ 1.54
SCARF1-204ENST00000570902 SAGE1Q9NXZ1 904 aa24.66■■□□□ 1.54
SCARF1-204ENST00000570902 CASP8AP2Q9UKL3 1982 aa24.65■■□□□ 1.54
SCARF1-204ENST00000570902 KIF4BQ2VIQ3 1234 aa24.65■■□□□ 1.54
SCARF1-204ENST00000570902 DUSP27Q5VZP5 1158 aa24.65■■□□□ 1.54
SCARF1-204ENST00000570902 DLK2Q6UY11 383 aa24.65■■□□□ 1.54
SCARF1-204ENST00000570902 KCNQ5Q9NR82 932 aa24.65■■□□□ 1.54
SCARF1-204ENST00000570902 PODXL2Q9NZ53 605 aa24.65■■□□□ 1.54
SCARF1-204ENST00000570902 FAM155AB1AL88 458 aaPredicted RBP24.64■■□□□ 1.54
SCARF1-204ENST00000570902 ADM5C9JUS6 153 aa24.64■■□□□ 1.54
SCARF1-204ENST00000570902 G3V3G9 751 aa24.64■■□□□ 1.54
SCARF1-204ENST00000570902 VIL1P09327 827 aaKnown RBP24.64■■□□□ 1.54
SCARF1-204ENST00000570902 GOLGA2Q08379 1002 aa24.64■■□□□ 1.54
SCARF1-204ENST00000570902 DCAF8Q5TAQ9 597 aa24.64■■□□□ 1.54
SCARF1-204ENST00000570902 SULF1Q8IWU6 871 aa24.64■■□□□ 1.54
SCARF1-204ENST00000570902 ZBTB38Q8NAP3 1195 aaPredicted RBP24.64■■□□□ 1.54
SCARF1-204ENST00000570902 ZNF157P51786 506 aaPredicted RBP24.63■■□□□ 1.53
SCARF1-204ENST00000570902 RIC3Q7Z5B4 369 aa24.63■■□□□ 1.53
SCARF1-204ENST00000570902 ANKIB1Q9P2G1 1089 aa24.63■■□□□ 1.53
SCARF1-204ENST00000570902 COL4A1P02462 1669 aa24.62■■□□□ 1.53
SCARF1-204ENST00000570902 GGA1Q9UJY5 639 aa24.62■■□□□ 1.53
SCARF1-204ENST00000570902 UFL1O94874 794 aa24.61■■□□□ 1.53
SCARF1-204ENST00000570902 GGA3Q9NZ52 723 aa24.61■■□□□ 1.53
SCARF1-204ENST00000570902 KIF23Q02241 960 aaPredicted RBP24.6■■□□□ 1.53
SCARF1-204ENST00000570902 CCDC152Q4G0S7 254 aa24.6■■□□□ 1.53
SCARF1-204ENST00000570902 MBIPQ9NS73 344 aa24.6■■□□□ 1.53
SCARF1-204ENST00000570902 ZNF609O15014 1411 aa24.6■■□□□ 1.53
SCARF1-204ENST00000570902 AGBL3Q8NEM8 1001 aa24.59■■□□□ 1.53
SCARF1-204ENST00000570902 SEC31BQ9NQW1 1179 aa24.59■■□□□ 1.53
SCARF1-204ENST00000570902 ADAMTS8Q9UP79 889 aa24.59■■□□□ 1.53
SCARF1-204ENST00000570902 POLR2AP24928 1970 aaKnown RBP24.59■■□□□ 1.53
SCARF1-204ENST00000570902 ZNF280AP59817 542 aaPredicted RBP24.58■■□□□ 1.53
SCARF1-204ENST00000570902 CCDC191Q8NCU4 936 aa24.58■■□□□ 1.53
SCARF1-204ENST00000570902 SCN9AQ15858 1988 aa24.57■■□□□ 1.52
SCARF1-204ENST00000570902 SLC10A3P09131 477 aa24.57■■□□□ 1.52
SCARF1-204ENST00000570902 RSBN1LQ6PCB5 846 aaPredicted RBP24.57■■□□□ 1.52
SCARF1-204ENST00000570902 REM2Q8IYK8 340 aaPredicted RBP24.57■■□□□ 1.52
SCARF1-204ENST00000570902 CDCA5Q96FF9 252 aa24.57■■□□□ 1.52
SCARF1-204ENST00000570902 RNF186Q9NXI6 227 aa24.57■■□□□ 1.52
SCARF1-204ENST00000570902 PDE8AO60658 829 aa24.56■■□□□ 1.52
SCARF1-204ENST00000570902 PCCAP05165 728 aaPredicted RBP24.56■■□□□ 1.52
SCARF1-204ENST00000570902 MYD88Q99836 296 aa24.56■■□□□ 1.52
SCARF1-204ENST00000570902 TRPA1O75762 1119 aa24.55■■□□□ 1.52
SCARF1-204ENST00000570902 ZNF853P0CG23 659 aa24.55■■□□□ 1.52
SCARF1-204ENST00000570902 CALD1Q05682 793 aaKnown RBP24.55■■□□□ 1.52
SCARF1-204ENST00000570902 SCARF1Q14162 830 aa24.55■■□□□ 1.52
SCARF1-204ENST00000570902 PHAXQ9H814 394 aaKnown RBP24.55■■□□□ 1.52
SCARF1-204ENST00000570902 IFT57Q9NWB7 429 aa24.55■■□□□ 1.52
SCARF1-204ENST00000570902 CWC25Q9NXE8 425 aaPredicted RBP24.55■■□□□ 1.52
SCARF1-204ENST00000570902 XDHP47989 1333 aa24.55■■□□□ 1.52
SCARF1-204ENST00000570902 FKBP1BP68106 108 aa24.54■■□□□ 1.52
SCARF1-204ENST00000570902 DDX10Q13206 875 aaKnown RBP24.54■■□□□ 1.52
SCARF1-204ENST00000570902 ANGEL2Q5VTE6 544 aaKnown RBP24.54■■□□□ 1.52
SCARF1-204ENST00000570902 ANKRD18AQ8IVF6 992 aa24.54■■□□□ 1.52
SCARF1-204ENST00000570902 CHMP4AQ9BY43 222 aa24.54■■□□□ 1.52
SCARF1-204ENST00000570902 ASTN2O75129 1339 aaPredicted RBP24.54■■□□□ 1.52
SCARF1-204ENST00000570902 DDX58O95786 925 aaKnown RBP24.53■■□□□ 1.52
SCARF1-204ENST00000570902 USP17L8P0C7I0 530 aa24.53■■□□□ 1.52
SCARF1-204ENST00000570902 GNAI1P63096 354 aa24.53■■□□□ 1.52
SCARF1-204ENST00000570902 CSRNP1Q96S65 589 aa24.53■■□□□ 1.52
SCARF1-204ENST00000570902 PITPNM2Q9BZ72 1349 aa24.53■■□□□ 1.52
SCARF1-204ENST00000570902 ATP2B4P23634 1241 aa24.52■■□□□ 1.52
SCARF1-204ENST00000570902 PODNQ7Z5L7 613 aa24.52■■□□□ 1.52
SCARF1-204ENST00000570902 MYOZ2Q9NPC6 264 aa24.52■■□□□ 1.52
SCARF1-204ENST00000570902 AKAP11Q9UKA4 1901 aa24.52■■□□□ 1.52
SCARF1-204ENST00000570902 USP17L3A6NCW0 530 aa24.51■■□□□ 1.51
SCARF1-204ENST00000570902 USP17L4A6NCW7 530 aa24.51■■□□□ 1.51
SCARF1-204ENST00000570902 USP17L1Q7RTZ2 530 aa24.51■■□□□ 1.51
SCARF1-204ENST00000570902 CCDC85AQ96PX6 553 aaPredicted RBP24.51■■□□□ 1.51
SCARF1-204ENST00000570902 PSME4Q14997 1843 aa24.51■■□□□ 1.51
SCARF1-204ENST00000570902 ELL2O00472 640 aaPredicted RBP24.5■■□□□ 1.51
SCARF1-204ENST00000570902 RASAL3Q86YV0 1011 aa24.5■■□□□ 1.51
SCARF1-204ENST00000570902 GMLQ99445 158 aa24.5■■□□□ 1.51
SCARF1-204ENST00000570902 CDC5LQ99459 802 aaKnown RBP24.5■■□□□ 1.51
SCARF1-204ENST00000570902 METTL22Q9BUU2 404 aaPredicted RBP24.5■■□□□ 1.51
SCARF1-204ENST00000570902 PAPPA2Q9BXP8 1791 aa24.49■■□□□ 1.51
SCARF1-204ENST00000570902 CCDC30Q5VVM6 783 aa24.48■■□□□ 1.51
SCARF1-204ENST00000570902 CTU1Q7Z7A3 348 aaKnown RBP24.48■■□□□ 1.51
SCARF1-204ENST00000570902 JARID2Q92833 1246 aaPredicted RBP24.48■■□□□ 1.51
SCARF1-204ENST00000570902 CTSWP56202 376 aa24.47■■□□□ 1.51
SCARF1-204ENST00000570902 MED23Q9ULK4 1368 aa24.46■■□□□ 1.51
SCARF1-204ENST00000570902 APAF1O14727 1248 aa24.46■■□□□ 1.51
SCARF1-204ENST00000570902 OGFOD1Q8N543 542 aa24.45■■□□□ 1.5
SCARF1-204ENST00000570902 C8orf58Q8NAV2 365 aa24.45■■□□□ 1.5
SCARF1-204ENST00000570902 BSDC1Q9NW68 430 aaPredicted RBP24.45■■□□□ 1.5
SCARF1-204ENST00000570902 MAP3K2Q9Y2U5 619 aa24.45■■□□□ 1.5
SCARF1-204ENST00000570902 SOX10P56693 466 aa24.44■■□□□ 1.5
SCARF1-204ENST00000570902 TNRC18O15417 2968 aaPredicted RBP24.43■■□□□ 1.5
SCARF1-204ENST00000570902 MYO3BQ8WXR4 1341 aa24.43■■□□□ 1.5
SCARF1-204ENST00000570902 MMP14P50281 582 aa24.43■■□□□ 1.5
SCARF1-204ENST00000570902 MINPP1Q9UNW1 487 aa24.43■■□□□ 1.5
SCARF1-204ENST00000570902 NEXNQ0ZGT2 675 aa24.42■■□□□ 1.5
SCARF1-204ENST00000570902 KSR2Q6VAB6 950 aa24.42■■□□□ 1.5
SCARF1-204ENST00000570902 TTLL11Q8NHH1 800 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms