RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 PLCD3Q8N3E9 789 aa15.88■□□□□ 0.13
CTDNEP1-205ENST00000570828 CCDC191Q8NCU4 936 aa15.88■□□□□ 0.13
CTDNEP1-205ENST00000570828 METTL22Q9BUU2 404 aaPredicted RBP15.88■□□□□ 0.13
CTDNEP1-205ENST00000570828 CWC25Q9NXE8 425 aaPredicted RBP15.88■□□□□ 0.13
CTDNEP1-205ENST00000570828 SALL2Q9Y467 1007 aaPredicted RBP15.88■□□□□ 0.13
CTDNEP1-205ENST00000570828 PCDHB13Q9Y5F0 798 aa15.88■□□□□ 0.13
CTDNEP1-205ENST00000570828 FANCIQ9NVI1 1328 aa15.88■□□□□ 0.13
CTDNEP1-205ENST00000570828 PNMA8AQ86V59 439 aaPredicted RBP15.87■□□□□ 0.13
CTDNEP1-205ENST00000570828 MAP3K2Q9Y2U5 619 aa15.87■□□□□ 0.13
CTDNEP1-205ENST00000570828 LAMB2P55268 1798 aa15.87■□□□□ 0.13
CTDNEP1-205ENST00000570828 PCCAP05165 728 aaPredicted RBP15.86■□□□□ 0.13
CTDNEP1-205ENST00000570828 NEXNQ0ZGT2 675 aa15.86■□□□□ 0.13
CTDNEP1-205ENST00000570828 KSR2Q6VAB6 950 aa15.86■□□□□ 0.13
CTDNEP1-205ENST00000570828 WDR63Q8IWG1 891 aa15.86■□□□□ 0.13
CTDNEP1-205ENST00000570828 FAM9BQ8IZU0 186 aa15.86■□□□□ 0.13
CTDNEP1-205ENST00000570828 CELF1Q92879 486 aaKnown RBP15.86■□□□□ 0.13
CTDNEP1-205ENST00000570828 DDX60Q8IY21 1712 aaKnown RBP15.85■□□□□ 0.13
CTDNEP1-205ENST00000570828 SCN4AP35499 1836 aa15.85■□□□□ 0.13
CTDNEP1-205ENST00000570828 PI4KAP2A4QPH2 592 aa15.85■□□□□ 0.13
CTDNEP1-205ENST00000570828 KIAA2012Q0VF49 1180 aa15.85■□□□□ 0.13
CTDNEP1-205ENST00000570828 PI4KAP1Q8N8J0 262 aa15.85■□□□□ 0.13
CTDNEP1-205ENST00000570828 ZNRF3Q9ULT6 936 aa15.85■□□□□ 0.13
CTDNEP1-205ENST00000570828 PDE8AO60658 829 aa15.84■□□□□ 0.13
CTDNEP1-205ENST00000570828 CCDC152Q4G0S7 254 aa15.84■□□□□ 0.13
CTDNEP1-205ENST00000570828 CDAN1Q8IWY9 1227 aa15.84■□□□□ 0.13
CTDNEP1-205ENST00000570828 NSFL1CQ9UNZ2 370 aaKnown RBP15.84■□□□□ 0.13
CTDNEP1-205ENST00000570828 SCNN1DP51172 638 aa15.83■□□□□ 0.12
CTDNEP1-205ENST00000570828 RPS8P62241 208 aaKnown RBP15.83■□□□□ 0.12
CTDNEP1-205ENST00000570828 ZBTB47Q9UFB7 747 aaPredicted RBP15.83■□□□□ 0.12
CTDNEP1-205ENST00000570828 CXCL9Q07325 125 aa15.82■□□□□ 0.12
CTDNEP1-205ENST00000570828 FLIIQ13045 1269 aa15.82■□□□□ 0.12
CTDNEP1-205ENST00000570828 G2E3Q7L622 706 aa15.82■□□□□ 0.12
CTDNEP1-205ENST00000570828 JMYQ8N9B5 988 aa15.82■□□□□ 0.12
CTDNEP1-205ENST00000570828 JARID2Q92833 1246 aaPredicted RBP15.82■□□□□ 0.12
CTDNEP1-205ENST00000570828 MYH16Q9H6N6 1097 aa15.82■□□□□ 0.12
CTDNEP1-205ENST00000570828 PASKQ96RG2 1323 aa15.82■□□□□ 0.12
CTDNEP1-205ENST00000570828 CDHR2Q9BYE9 1310 aa15.82■□□□□ 0.12
CTDNEP1-205ENST00000570828 DUOX1Q9NRD9 1551 aa15.82■□□□□ 0.12
CTDNEP1-205ENST00000570828 LRRC37AA6NMS7 1700 aa15.82■□□□□ 0.12
CTDNEP1-205ENST00000570828 C6orf229H3BNL8 230 aa15.81■□□□□ 0.12
CTDNEP1-205ENST00000570828 IGKV5-2P06315 115 aa15.81■□□□□ 0.12
CTDNEP1-205ENST00000570828 EPS15P42566 896 aa15.81■□□□□ 0.12
CTDNEP1-205ENST00000570828 GPSM2P81274 684 aa15.81■□□□□ 0.12
CTDNEP1-205ENST00000570828 EXOSC9Q06265 439 aaKnown RBP15.81■□□□□ 0.12
CTDNEP1-205ENST00000570828 FKBP5Q13451 457 aaPredicted RBP15.81■□□□□ 0.12
CTDNEP1-205ENST00000570828 WASHC4Q2M389 1173 aa15.81■□□□□ 0.12
CTDNEP1-205ENST00000570828 CIAPIN1Q6FI81 312 aa15.81■□□□□ 0.12
CTDNEP1-205ENST00000570828 CCDC85AQ96PX6 553 aaPredicted RBP15.81■□□□□ 0.12
CTDNEP1-205ENST00000570828 SEC31BQ9NQW1 1179 aa15.81■□□□□ 0.12
CTDNEP1-205ENST00000570828 NEURL1BA8MQ27 555 aa15.8■□□□□ 0.12
CTDNEP1-205ENST00000570828 RAD17O75943 681 aa15.8■□□□□ 0.12
CTDNEP1-205ENST00000570828 GMPSP49915 693 aaPredicted RBP15.8■□□□□ 0.12
CTDNEP1-205ENST00000570828 CTSWP56202 376 aa15.8■□□□□ 0.12
CTDNEP1-205ENST00000570828 TNIP1Q15025 636 aa15.8■□□□□ 0.12
CTDNEP1-205ENST00000570828 CWF19L2Q2TBE0 894 aaKnown RBP15.8■□□□□ 0.12
CTDNEP1-205ENST00000570828 MAP1SQ66K74 1059 aaPredicted RBP15.8■□□□□ 0.12
CTDNEP1-205ENST00000570828 CNTROBQ8N137 903 aa15.8■□□□□ 0.12
CTDNEP1-205ENST00000570828 EYA3Q99504 573 aa15.8■□□□□ 0.12
CTDNEP1-205ENST00000570828 GPRC5DQ9NZD1 345 aa15.8■□□□□ 0.12
CTDNEP1-205ENST00000570828 PCNTO95613 3336 aa15.8■□□□□ 0.12
CTDNEP1-205ENST00000570828 VAMP4O75379 141 aa15.79■□□□□ 0.12
CTDNEP1-205ENST00000570828 ITGBL1O95965 494 aaPredicted RBP15.79■□□□□ 0.12
CTDNEP1-205ENST00000570828 USP50Q70EL3 339 aaPredicted RBP15.79■□□□□ 0.12
CTDNEP1-205ENST00000570828 CDC5LQ99459 802 aaKnown RBP15.79■□□□□ 0.12
CTDNEP1-205ENST00000570828 BCL2L13Q9BXK5 485 aa15.79■□□□□ 0.12
CTDNEP1-205ENST00000570828 ADARB2Q9NS39 739 aaKnown RBP15.79■□□□□ 0.12
CTDNEP1-205ENST00000570828 ANKIB1Q9P2G1 1089 aa15.79■□□□□ 0.12
CTDNEP1-205ENST00000570828 POLLQ9UGP5 575 aa15.79■□□□□ 0.12
CTDNEP1-205ENST00000570828 ADAMTSL1Q8N6G6 1762 aa15.79■□□□□ 0.12
CTDNEP1-205ENST00000570828 COL4A1P02462 1669 aa15.79■□□□□ 0.12
CTDNEP1-205ENST00000570828 LTBP1Q14766 1721 aa15.78■□□□□ 0.12
CTDNEP1-205ENST00000570828 TMEM88BA6NKF7 163 aa15.78■□□□□ 0.12
CTDNEP1-205ENST00000570828 YDJCA8MPS7 323 aa15.78■□□□□ 0.12
CTDNEP1-205ENST00000570828 RIMBP2O15034 1052 aa15.78■□□□□ 0.12
CTDNEP1-205ENST00000570828 ANKRD18AQ8IVF6 992 aa15.78■□□□□ 0.12
CTDNEP1-205ENST00000570828 SLAIN1Q8ND83 568 aa15.78■□□□□ 0.12
CTDNEP1-205ENST00000570828 TBC1D16Q8TBP0 767 aa15.78■□□□□ 0.12
CTDNEP1-205ENST00000570828 DNAAF4Q8WXU2 420 aa15.78■□□□□ 0.12
CTDNEP1-205ENST00000570828 UFL1O94874 794 aa15.77■□□□□ 0.12
CTDNEP1-205ENST00000570828 NUBP1P53384 320 aa15.77■□□□□ 0.12
CTDNEP1-205ENST00000570828 UBE3BQ7Z3V4 1068 aa15.77■□□□□ 0.12
CTDNEP1-205ENST00000570828 DBNDD1Q9H9R9 158 aa15.77■□□□□ 0.12
CTDNEP1-205ENST00000570828 PODXL2Q9NZ53 605 aa15.77■□□□□ 0.12
CTDNEP1-205ENST00000570828 MKRN1Q9UHC7 482 aaKnown RBP15.77■□□□□ 0.12
CTDNEP1-205ENST00000570828 GGA1Q9UJY5 639 aa15.77■□□□□ 0.12
CTDNEP1-205ENST00000570828 TAF1P21675 1872 aa15.76■□□□□ 0.11
CTDNEP1-205ENST00000570828 ECE2O60344 883 aa15.76■□□□□ 0.11
CTDNEP1-205ENST00000570828 GCKRQ14397 625 aa15.76■□□□□ 0.11
CTDNEP1-205ENST00000570828 IFNL1Q8IU54 200 aa15.76■□□□□ 0.11
CTDNEP1-205ENST00000570828 LINS1Q8NG48 757 aa15.76■□□□□ 0.11
CTDNEP1-205ENST00000570828 GPR101Q96P66 508 aaPredicted RBP15.76■□□□□ 0.11
CTDNEP1-205ENST00000570828 ZC3H12CQ9C0D7 883 aaKnown RBP15.76■□□□□ 0.11
CTDNEP1-205ENST00000570828 CNTNAP1P78357 1384 aa15.75■□□□□ 0.11
CTDNEP1-205ENST00000570828 XDHP47989 1333 aa15.75■□□□□ 0.11
CTDNEP1-205ENST00000570828 G3V3G9 751 aa15.75■□□□□ 0.11
CTDNEP1-205ENST00000570828 DOK7Q18PE1 504 aa15.75■□□□□ 0.11
CTDNEP1-205ENST00000570828 DCAF8Q5TAQ9 597 aa15.75■□□□□ 0.11
CTDNEP1-205ENST00000570828 TTLL11Q8NHH1 800 aa15.75■□□□□ 0.11
CTDNEP1-205ENST00000570828 GREM2Q9H772 168 aa15.75■□□□□ 0.11
CTDNEP1-205ENST00000570828 RTL9Q8NET4 1388 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms