RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 CALD1Q05682 793 aaKnown RBP11.12□□□□□ -0.63
CTDNEP1-203ENST00000570385 CDC37L1Q7L3B6 337 aa11.12□□□□□ -0.63
CTDNEP1-203ENST00000570385 ZC3H15Q8WU90 426 aaKnown RBP11.12□□□□□ -0.63
CTDNEP1-203ENST00000570385 TSR2Q969E8 191 aaKnown RBP11.12□□□□□ -0.63
CTDNEP1-203ENST00000570385 ANKIB1Q9P2G1 1089 aa11.12□□□□□ -0.63
CTDNEP1-203ENST00000570385 MAP3K2Q9Y2U5 619 aa11.12□□□□□ -0.63
CTDNEP1-203ENST00000570385 RTL9Q8NET4 1388 aa11.12□□□□□ -0.63
CTDNEP1-203ENST00000570385 POLR2AP24928 1970 aaKnown RBP11.12□□□□□ -0.63
CTDNEP1-203ENST00000570385 LRRC37AA6NMS7 1700 aa11.12□□□□□ -0.63
CTDNEP1-203ENST00000570385 CDHR2Q9BYE9 1310 aa11.11□□□□□ -0.63
CTDNEP1-203ENST00000570385 G3V3G9 751 aa11.11□□□□□ -0.63
CTDNEP1-203ENST00000570385 DCAF8Q5TAQ9 597 aa11.11□□□□□ -0.63
CTDNEP1-203ENST00000570385 CCDC30Q5VVM6 783 aa11.11□□□□□ -0.63
CTDNEP1-203ENST00000570385 CCDC191Q8NCU4 936 aa11.11□□□□□ -0.63
CTDNEP1-203ENST00000570385 DPF2Q92785 391 aa11.11□□□□□ -0.63
CTDNEP1-203ENST00000570385 ZIC5Q96T25 663 aa11.11□□□□□ -0.63
CTDNEP1-203ENST00000570385 EYA3Q99504 573 aa11.11□□□□□ -0.63
CTDNEP1-203ENST00000570385 METTL22Q9BUU2 404 aaPredicted RBP11.11□□□□□ -0.63
CTDNEP1-203ENST00000570385 ZC3H12CQ9C0D7 883 aaKnown RBP11.11□□□□□ -0.63
CTDNEP1-203ENST00000570385 CWC25Q9NXE8 425 aaPredicted RBP11.11□□□□□ -0.63
CTDNEP1-203ENST00000570385 ASTN2O75129 1339 aaPredicted RBP11.1□□□□□ -0.63
CTDNEP1-203ENST00000570385 WTIPA6NIX2 430 aaPredicted RBP11.1□□□□□ -0.63
CTDNEP1-203ENST00000570385 ADM5C9JUS6 153 aa11.1□□□□□ -0.63
CTDNEP1-203ENST00000570385 PDE8AO60658 829 aa11.1□□□□□ -0.63
CTDNEP1-203ENST00000570385 PCCAP05165 728 aaPredicted RBP11.1□□□□□ -0.63
CTDNEP1-203ENST00000570385 CCDC152Q4G0S7 254 aa11.1□□□□□ -0.63
CTDNEP1-203ENST00000570385 KRT26Q7Z3Y9 468 aa11.1□□□□□ -0.63
CTDNEP1-203ENST00000570385 GGA1Q9UJY5 639 aa11.1□□□□□ -0.63
CTDNEP1-203ENST00000570385 SCN9AQ15858 1988 aa11.09□□□□□ -0.63
CTDNEP1-203ENST00000570385 PI4KAP2A4QPH2 592 aa11.09□□□□□ -0.63
CTDNEP1-203ENST00000570385 DDX58O95786 925 aaKnown RBP11.09□□□□□ -0.63
CTDNEP1-203ENST00000570385 MAP2K2P36507 400 aa11.09□□□□□ -0.63
CTDNEP1-203ENST00000570385 HUNKP57058 714 aa11.09□□□□□ -0.63
CTDNEP1-203ENST00000570385 PI4KAP1Q8N8J0 262 aa11.09□□□□□ -0.63
CTDNEP1-203ENST00000570385 DCPSQ96C86 337 aaKnown RBP11.09□□□□□ -0.63
CTDNEP1-203ENST00000570385 ABHD8Q96I13 439 aa11.09□□□□□ -0.63
CTDNEP1-203ENST00000570385 IGKV5-2P06315 115 aa11.08□□□□□ -0.64
CTDNEP1-203ENST00000570385 VIL1P09327 827 aaKnown RBP11.08□□□□□ -0.64
CTDNEP1-203ENST00000570385 HSP90B1P14625 803 aaKnown RBP11.08□□□□□ -0.64
CTDNEP1-203ENST00000570385 RPS12P25398 132 aaKnown RBP11.08□□□□□ -0.64
CTDNEP1-203ENST00000570385 CWF19L2Q2TBE0 894 aaKnown RBP11.08□□□□□ -0.64
CTDNEP1-203ENST00000570385 KIF4BQ2VIQ3 1234 aa11.08□□□□□ -0.64
CTDNEP1-203ENST00000570385 KSR2Q6VAB6 950 aa11.08□□□□□ -0.64
CTDNEP1-203ENST00000570385 G2E3Q7L622 706 aa11.08□□□□□ -0.64
CTDNEP1-203ENST00000570385 ANKRD18AQ8IVF6 992 aa11.08□□□□□ -0.64
CTDNEP1-203ENST00000570385 PODXL2Q9NZ53 605 aa11.08□□□□□ -0.64
CTDNEP1-203ENST00000570385 SCAF8Q9UPN6 1271 aaKnown RBP11.08□□□□□ -0.64
CTDNEP1-203ENST00000570385 SALL2Q9Y467 1007 aaPredicted RBP11.08□□□□□ -0.64
CTDNEP1-203ENST00000570385 CASP8AP2Q9UKL3 1982 aa11.08□□□□□ -0.64
CTDNEP1-203ENST00000570385 CTSWP56202 376 aa11.07□□□□□ -0.64
CTDNEP1-203ENST00000570385 STK31Q9BXU1 1019 aa11.07□□□□□ -0.64
CTDNEP1-203ENST00000570385 GREM2Q9H772 168 aa11.07□□□□□ -0.64
CTDNEP1-203ENST00000570385 GBA2Q9HCG7 927 aaPredicted RBP11.07□□□□□ -0.64
CTDNEP1-203ENST00000570385 GGA3Q9NZ52 723 aa11.07□□□□□ -0.64
CTDNEP1-203ENST00000570385 XDHP47989 1333 aa11.07□□□□□ -0.64
CTDNEP1-203ENST00000570385 THSD7BQ9C0I4 1608 aa11.06□□□□□ -0.64
CTDNEP1-203ENST00000570385 CCDC85CA6NKD9 419 aa11.06□□□□□ -0.64
CTDNEP1-203ENST00000570385 SLC4A2P04920 1241 aa11.06□□□□□ -0.64
CTDNEP1-203ENST00000570385 SCARF1Q14162 830 aa11.06□□□□□ -0.64
CTDNEP1-203ENST00000570385 TWISTNBQ3B726 338 aaPredicted RBP11.06□□□□□ -0.64
CTDNEP1-203ENST00000570385 RSBN1LQ6PCB5 846 aaPredicted RBP11.06□□□□□ -0.64
CTDNEP1-203ENST00000570385 UBE3BQ7Z3V4 1068 aa11.06□□□□□ -0.64
CTDNEP1-203ENST00000570385 SULF1Q8IWU6 871 aa11.06□□□□□ -0.64
CTDNEP1-203ENST00000570385 WWC1Q8IX03 1113 aa11.06□□□□□ -0.64
CTDNEP1-203ENST00000570385 C2orf69Q8N8R5 385 aa11.06□□□□□ -0.64
CTDNEP1-203ENST00000570385 TTLL11Q8NHH1 800 aa11.06□□□□□ -0.64
CTDNEP1-203ENST00000570385 HHIPL1Q96JK4 782 aa11.06□□□□□ -0.64
CTDNEP1-203ENST00000570385 MXD3Q9BW11 206 aa11.06□□□□□ -0.64
CTDNEP1-203ENST00000570385 NEURL1BA8MQ27 555 aa11.05□□□□□ -0.64
CTDNEP1-203ENST00000570385 ATP2B4P23634 1241 aa11.05□□□□□ -0.64
CTDNEP1-203ENST00000570385 BRPF1P55201 1214 aaPredicted RBP11.05□□□□□ -0.64
CTDNEP1-203ENST00000570385 NEXNQ0ZGT2 675 aa11.05□□□□□ -0.64
CTDNEP1-203ENST00000570385 NOGQ13253 232 aa11.05□□□□□ -0.64
CTDNEP1-203ENST00000570385 ANGEL2Q5VTE6 544 aaKnown RBP11.05□□□□□ -0.64
CTDNEP1-203ENST00000570385 RGMBQ6NW40 437 aa11.05□□□□□ -0.64
CTDNEP1-203ENST00000570385 FBXW7Q969H0 707 aa11.05□□□□□ -0.64
CTDNEP1-203ENST00000570385 CDC5LQ99459 802 aaKnown RBP11.05□□□□□ -0.64
CTDNEP1-203ENST00000570385 MINPP1Q9UNW1 487 aa11.05□□□□□ -0.64
CTDNEP1-203ENST00000570385 FAM155AB1AL88 458 aaPredicted RBP11.04□□□□□ -0.64
CTDNEP1-203ENST00000570385 USP17L8P0C7I0 530 aa11.04□□□□□ -0.64
CTDNEP1-203ENST00000570385 ZNF157P51786 506 aaPredicted RBP11.04□□□□□ -0.64
CTDNEP1-203ENST00000570385 KIF23Q02241 960 aaPredicted RBP11.04□□□□□ -0.64
CTDNEP1-203ENST00000570385 PRAMEF18Q5VWM3 479 aa11.04□□□□□ -0.64
CTDNEP1-203ENST00000570385 AGBL3Q8NEM8 1001 aa11.04□□□□□ -0.64
CTDNEP1-203ENST00000570385 CDCA5Q96FF9 252 aa11.04□□□□□ -0.64
CTDNEP1-203ENST00000570385 CHMP4AQ9BY43 222 aa11.04□□□□□ -0.64
CTDNEP1-203ENST00000570385 USP17L3A6NCW0 530 aa11.03□□□□□ -0.64
CTDNEP1-203ENST00000570385 USP17L4A6NCW7 530 aa11.03□□□□□ -0.64
CTDNEP1-203ENST00000570385 H7C1W4 665 aa11.03□□□□□ -0.64
CTDNEP1-203ENST00000570385 KLRK1P26718 216 aa11.03□□□□□ -0.64
CTDNEP1-203ENST00000570385 ZNF280AP59817 542 aaPredicted RBP11.03□□□□□ -0.64
CTDNEP1-203ENST00000570385 MOB2Q70IA6 237 aa11.03□□□□□ -0.64
CTDNEP1-203ENST00000570385 USP17L1Q7RTZ2 530 aa11.03□□□□□ -0.64
CTDNEP1-203ENST00000570385 TXNRD3Q86VQ6 643 aa11.03□□□□□ -0.64
CTDNEP1-203ENST00000570385 GMLQ99445 158 aa11.03□□□□□ -0.64
CTDNEP1-203ENST00000570385 MCOLN1Q9GZU1 580 aa11.03□□□□□ -0.64
CTDNEP1-203ENST00000570385 MRS2Q9HD23 443 aa11.03□□□□□ -0.64
CTDNEP1-203ENST00000570385 MYOZ2Q9NPC6 264 aa11.03□□□□□ -0.64
CTDNEP1-203ENST00000570385 BSDC1Q9NW68 430 aaPredicted RBP11.03□□□□□ -0.64
CTDNEP1-203ENST00000570385 SPEF2Q9C093 1822 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms