RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 CWF19L2Q2TBE0 894 aaKnown RBP12.56□□□□□ -0.4
GDE1-205ENST00000569899 ADGRD1Q6QNK2 874 aa12.56□□□□□ -0.4
GDE1-205ENST00000569899 ANKRD13DQ6ZTN6 518 aa12.56□□□□□ -0.4
GDE1-205ENST00000569899 LINC00116Q8NCU8 138 aa12.56□□□□□ -0.4
GDE1-205ENST00000569899 RGPD3A6NKT7 1758 aaPredicted RBP12.56□□□□□ -0.4
GDE1-205ENST00000569899 RGPD4Q7Z3J3 1758 aa12.56□□□□□ -0.4
GDE1-205ENST00000569899 UBR3Q6ZT12 1888 aa12.55□□□□□ -0.4
GDE1-205ENST00000569899 TRIM37O94972 964 aa12.55□□□□□ -0.4
GDE1-205ENST00000569899 PLBD2Q8NHP8 589 aa12.55□□□□□ -0.4
GDE1-205ENST00000569899 NLRP7Q8WX94 980 aa12.55□□□□□ -0.4
GDE1-205ENST00000569899 MYD88Q99836 296 aa12.55□□□□□ -0.4
GDE1-205ENST00000569899 ZBTB3Q9H5J0 574 aa12.55□□□□□ -0.4
GDE1-205ENST00000569899 CCDC87Q9NVE4 849 aa12.55□□□□□ -0.4
GDE1-205ENST00000569899 INTS5Q6P9B9 1019 aaKnown RBP12.55□□□□□ -0.4
GDE1-205ENST00000569899 CENPQQ7L2Z9 268 aaPredicted RBP12.55□□□□□ -0.4
GDE1-205ENST00000569899 METTL22Q9BUU2 404 aaPredicted RBP12.55□□□□□ -0.4
GDE1-205ENST00000569899 IGKV5-2P06315 115 aa12.54□□□□□ -0.4
GDE1-205ENST00000569899 CDAN1Q8IWY9 1227 aa12.54□□□□□ -0.4
GDE1-205ENST00000569899 LINS1Q8NG48 757 aa12.54□□□□□ -0.4
GDE1-205ENST00000569899 USP44Q9H0E7 712 aa12.54□□□□□ -0.4
GDE1-205ENST00000569899 SEPT9Q9UHD8 586 aaPredicted RBP12.54□□□□□ -0.4
GDE1-205ENST00000569899 CCNL1Q9UK58 526 aaPredicted RBP12.54□□□□□ -0.4
GDE1-205ENST00000569899 TUBGCP6Q96RT7 1819 aa12.54□□□□□ -0.4
GDE1-205ENST00000569899 ALDH1L1O75891 902 aa12.53□□□□□ -0.4
GDE1-205ENST00000569899 IL6STP40189 918 aaPredicted RBP12.53□□□□□ -0.4
GDE1-205ENST00000569899 KIF6Q6ZMV9 814 aa12.53□□□□□ -0.4
GDE1-205ENST00000569899 COL15A1P39059 1388 aa12.53□□□□□ -0.4
GDE1-205ENST00000569899 CNTNAP4Q9C0A0 1308 aa12.53□□□□□ -0.4
GDE1-205ENST00000569899 NEURL1BA8MQ27 555 aa12.52□□□□□ -0.4
GDE1-205ENST00000569899 BHMG1C9JSJ3 638 aaPredicted RBP12.52□□□□□ -0.4
GDE1-205ENST00000569899 GNAI3P08754 354 aa12.52□□□□□ -0.4
GDE1-205ENST00000569899 NBPF7P0C2Y1 421 aaPredicted RBP12.52□□□□□ -0.4
GDE1-205ENST00000569899 UBTFL1P0CB47 393 aaPredicted RBP12.52□□□□□ -0.4
GDE1-205ENST00000569899 NEXNQ0ZGT2 675 aa12.52□□□□□ -0.4
GDE1-205ENST00000569899 CEP85Q6P2H3 762 aa12.52□□□□□ -0.4
GDE1-205ENST00000569899 SIRT2Q8IXJ6 389 aa12.52□□□□□ -0.4
GDE1-205ENST00000569899 GPBP1L1Q9HC44 474 aaPredicted RBP12.52□□□□□ -0.4
GDE1-205ENST00000569899 MAP3K15Q6ZN16 1313 aa12.52□□□□□ -0.41
GDE1-205ENST00000569899 CASZ1Q86V15 1759 aa12.52□□□□□ -0.41
GDE1-205ENST00000569899 RCCD1A6NED2 376 aa12.51□□□□□ -0.41
GDE1-205ENST00000569899 ATP5J2-PTCD1G3V325 749 aa12.51□□□□□ -0.41
GDE1-205ENST00000569899 GNAI2P04899 355 aa12.51□□□□□ -0.41
GDE1-205ENST00000569899 EIF5P55010 431 aaKnown RBP12.51□□□□□ -0.41
GDE1-205ENST00000569899 MDM2Q00987 491 aaPredicted RBP12.51□□□□□ -0.41
GDE1-205ENST00000569899 HDAC1Q13547 482 aaPredicted RBP12.51□□□□□ -0.41
GDE1-205ENST00000569899 SKAP1Q86WV1 359 aa12.51□□□□□ -0.41
GDE1-205ENST00000569899 PARP9Q8IXQ6 854 aa12.51□□□□□ -0.41
GDE1-205ENST00000569899 LRRFIP2Q9Y608 721 aaKnown RBP12.51□□□□□ -0.41
GDE1-205ENST00000569899 IBTKQ9P2D0 1353 aaPredicted RBP12.51□□□□□ -0.41
GDE1-205ENST00000569899 MYH3P11055 1940 aa12.51□□□□□ -0.41
GDE1-205ENST00000569899 HRO43593 1189 aa12.51□□□□□ -0.41
GDE1-205ENST00000569899 ANKRD44Q8N8A2 993 aa12.51□□□□□ -0.41
GDE1-205ENST00000569899 ARXQ96QS3 562 aa12.51□□□□□ -0.41
GDE1-205ENST00000569899 RWDD1Q9H446 243 aaPredicted RBP12.51□□□□□ -0.41
GDE1-205ENST00000569899 LAMB2P55268 1798 aa12.5□□□□□ -0.41
GDE1-205ENST00000569899 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.5□□□□□ -0.41
GDE1-205ENST00000569899 GRM8O00222 908 aa12.5□□□□□ -0.41
GDE1-205ENST00000569899 TTLL12Q14166 644 aaPredicted RBP12.5□□□□□ -0.41
GDE1-205ENST00000569899 GCKRQ14397 625 aa12.5□□□□□ -0.41
GDE1-205ENST00000569899 DZIP3Q86Y13 1208 aaKnown RBP12.5□□□□□ -0.41
GDE1-205ENST00000569899 REPIN1Q9BWE0 567 aaKnown RBP12.5□□□□□ -0.41
GDE1-205ENST00000569899 LRRC4BQ9NT99 713 aa12.5□□□□□ -0.41
GDE1-205ENST00000569899 C9orf78Q9NZ63 289 aaPredicted RBP12.5□□□□□ -0.41
GDE1-205ENST00000569899 TBC1D2BQ9UPU7 963 aa12.5□□□□□ -0.41
GDE1-205ENST00000569899 COL24A1Q17RW2 1714 aa12.49□□□□□ -0.41
GDE1-205ENST00000569899 HLFQ16534 295 aa12.49□□□□□ -0.41
GDE1-205ENST00000569899 TMUB1Q9BVT8 246 aa12.49□□□□□ -0.41
GDE1-205ENST00000569899 UTYO14607 1347 aa12.49□□□□□ -0.41
GDE1-205ENST00000569899 DNAJB2P25686 324 aa12.48□□□□□ -0.41
GDE1-205ENST00000569899 SMIM5Q71RC9 77 aa12.48□□□□□ -0.41
GDE1-205ENST00000569899 NPM2Q86SE8 214 aaKnown RBP12.48□□□□□ -0.41
GDE1-205ENST00000569899 NBPF3Q9H094 633 aa12.48□□□□□ -0.41
GDE1-205ENST00000569899 DDX60Q8IY21 1712 aaKnown RBP12.48□□□□□ -0.41
GDE1-205ENST00000569899 TCIRG1Q13488 830 aa12.48□□□□□ -0.41
GDE1-205ENST00000569899 GIGYF2Q6Y7W6 1299 aaKnown RBP12.48□□□□□ -0.41
GDE1-205ENST00000569899 AMIGO3Q86WK7 504 aa12.48□□□□□ -0.41
GDE1-205ENST00000569899 RPAP2Q8IXW5 612 aaPredicted RBP12.48□□□□□ -0.41
GDE1-205ENST00000569899 JARID2Q92833 1246 aaPredicted RBP12.48□□□□□ -0.41
GDE1-205ENST00000569899 SUCLG2Q96I99 432 aa12.48□□□□□ -0.41
GDE1-205ENST00000569899 ISCA1Q9BUE6 129 aa12.48□□□□□ -0.41
GDE1-205ENST00000569899 PNMA6EA0A0J9YXQ4 647 aa12.47□□□□□ -0.41
GDE1-205ENST00000569899 CAMTA2O94983 1202 aa12.47□□□□□ -0.41
GDE1-205ENST00000569899 CLCN1P35523 988 aa12.47□□□□□ -0.41
GDE1-205ENST00000569899 RC3H1Q5TC82 1133 aaKnown RBP12.47□□□□□ -0.41
GDE1-205ENST00000569899 SMC5Q8IY18 1101 aa12.47□□□□□ -0.41
GDE1-205ENST00000569899 KDM4CQ9H3R0 1056 aa12.47□□□□□ -0.41
GDE1-205ENST00000569899 GPCPD1Q9NPB8 672 aa12.47□□□□□ -0.41
GDE1-205ENST00000569899 CWC25Q9NXE8 425 aaPredicted RBP12.47□□□□□ -0.41
GDE1-205ENST00000569899 A0A087WZG4 1122 aa12.46□□□□□ -0.41
GDE1-205ENST00000569899 ERVV-1B6SEH8 477 aa12.46□□□□□ -0.41
GDE1-205ENST00000569899 GPTP24298 496 aa12.46□□□□□ -0.41
GDE1-205ENST00000569899 TXNRD1Q16881 649 aa12.46□□□□□ -0.41
GDE1-205ENST00000569899 UBE3BQ7Z3V4 1068 aa12.46□□□□□ -0.41
GDE1-205ENST00000569899 LAPTM4BQ86VI4 370 aa12.46□□□□□ -0.41
GDE1-205ENST00000569899 CCDC191Q8NCU4 936 aa12.46□□□□□ -0.41
GDE1-205ENST00000569899 KAZALD1Q96I82 304 aa12.46□□□□□ -0.41
GDE1-205ENST00000569899 TMEM134Q9H6X4 195 aa12.46□□□□□ -0.41
GDE1-205ENST00000569899 PDZRN3Q9UPQ7 1066 aa12.46□□□□□ -0.41
GDE1-205ENST00000569899 HMMRO75330 724 aa12.45□□□□□ -0.42
GDE1-205ENST00000569899 RPS6KA4O75676 772 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms