RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 IPO8O15397 1037 aaKnown RBP12.37□□□□□ -0.43
CLN6-209ENST00000569336 CSF1RP07333 972 aa12.37□□□□□ -0.43
CLN6-209ENST00000569336 VEGFAP15692 232 aaPredicted RBP12.37□□□□□ -0.43
CLN6-209ENST00000569336 ITGA6P23229 1130 aa12.37□□□□□ -0.43
CLN6-209ENST00000569336 AOC3Q16853 763 aa12.37□□□□□ -0.43
CLN6-209ENST00000569336 GPC2Q8N158 579 aa12.37□□□□□ -0.43
CLN6-209ENST00000569336 ARHGAP45Q92619 1136 aa12.37□□□□□ -0.43
CLN6-209ENST00000569336 MPHOSPH8Q99549 860 aa12.37□□□□□ -0.43
CLN6-209ENST00000569336 PODXL2Q9NZ53 605 aa12.37□□□□□ -0.43
CLN6-209ENST00000569336 ANKIB1Q9P2G1 1089 aa12.37□□□□□ -0.43
CLN6-209ENST00000569336 CHMP3Q9Y3E7 222 aa12.37□□□□□ -0.43
CLN6-209ENST00000569336 ZNF541Q9H0D2 1346 aa12.37□□□□□ -0.43
CLN6-209ENST00000569336 C6orf229H3BNL8 230 aa12.36□□□□□ -0.43
CLN6-209ENST00000569336 UFL1O94874 794 aa12.36□□□□□ -0.43
CLN6-209ENST00000569336 IFIT5Q13325 482 aaKnown RBP12.36□□□□□ -0.43
CLN6-209ENST00000569336 WASHC4Q2M389 1173 aa12.36□□□□□ -0.43
CLN6-209ENST00000569336 SLC51AQ86UW1 340 aa12.36□□□□□ -0.43
CLN6-209ENST00000569336 L3MBTL3Q96JM7 780 aaPredicted RBP12.36□□□□□ -0.43
CLN6-209ENST00000569336 BSDC1Q9NW68 430 aaPredicted RBP12.36□□□□□ -0.43
CLN6-209ENST00000569336 PCDH10Q9P2E7 1040 aa12.36□□□□□ -0.43
CLN6-209ENST00000569336 GGA1Q9UJY5 639 aa12.36□□□□□ -0.43
CLN6-209ENST00000569336 NOB1Q9ULX3 412 aaKnown RBP12.36□□□□□ -0.43
CLN6-209ENST00000569336 HDAC5Q9UQL6 1122 aa12.36□□□□□ -0.43
CLN6-209ENST00000569336 GPSM2P81274 684 aa12.35□□□□□ -0.43
CLN6-209ENST00000569336 FOXO4P98177 505 aa12.35□□□□□ -0.43
CLN6-209ENST00000569336 CCDC57Q2TAC2 916 aa12.35□□□□□ -0.43
CLN6-209ENST00000569336 TAF7LQ5H9L4 462 aa12.35□□□□□ -0.43
CLN6-209ENST00000569336 TBC1D16Q8TBP0 767 aa12.35□□□□□ -0.43
CLN6-209ENST00000569336 RRAGCQ9HB90 399 aa12.35□□□□□ -0.43
CLN6-209ENST00000569336 ZNRF3Q9ULT6 936 aa12.35□□□□□ -0.43
CLN6-209ENST00000569336 MED23Q9ULK4 1368 aa12.34□□□□□ -0.43
CLN6-209ENST00000569336 DDNO94850 711 aaPredicted RBP12.34□□□□□ -0.43
CLN6-209ENST00000569336 NBPF7P0C2Y1 421 aaPredicted RBP12.34□□□□□ -0.43
CLN6-209ENST00000569336 LMBR1LQ6UX01 489 aa12.34□□□□□ -0.43
CLN6-209ENST00000569336 RBM46Q8TBY0 533 aaKnown RBP12.34□□□□□ -0.43
CLN6-209ENST00000569336 ANKRD2Q9GZV1 360 aa12.34□□□□□ -0.43
CLN6-209ENST00000569336 G3V3G9 751 aa12.33□□□□□ -0.44
CLN6-209ENST00000569336 UBTFL1P0CB47 393 aaPredicted RBP12.33□□□□□ -0.44
CLN6-209ENST00000569336 HSPA1AP0DMV8 641 aaKnown RBP12.33□□□□□ -0.44
CLN6-209ENST00000569336 HSPA1BP0DMV9 641 aaKnown RBP12.33□□□□□ -0.44
CLN6-209ENST00000569336 ATP2B4P23634 1241 aa12.33□□□□□ -0.44
CLN6-209ENST00000569336 LMOD1P29536 600 aaPredicted RBP12.33□□□□□ -0.44
CLN6-209ENST00000569336 TNIP1Q15025 636 aa12.33□□□□□ -0.44
CLN6-209ENST00000569336 DCAF8Q5TAQ9 597 aa12.33□□□□□ -0.44
CLN6-209ENST00000569336 FRAT1Q92837 279 aaPredicted RBP12.33□□□□□ -0.44
CLN6-209ENST00000569336 ZC3H12CQ9C0D7 883 aaKnown RBP12.33□□□□□ -0.44
CLN6-209ENST00000569336 POLLQ9UGP5 575 aa12.33□□□□□ -0.44
CLN6-209ENST00000569336 GJA3Q9Y6H8 435 aa12.33□□□□□ -0.44
CLN6-209ENST00000569336 ZNF609O15014 1411 aa12.32□□□□□ -0.44
CLN6-209ENST00000569336 PCNTO95613 3336 aa12.32□□□□□ -0.44
CLN6-209ENST00000569336 FSTL1Q12841 308 aa12.32□□□□□ -0.44
CLN6-209ENST00000569336 RABL6Q3YEC7 729 aaPredicted RBP12.32□□□□□ -0.44
CLN6-209ENST00000569336 ZKSCAN2Q63HK3 967 aa12.32□□□□□ -0.44
CLN6-209ENST00000569336 ATF7IPQ6VMQ6 1270 aa12.32□□□□□ -0.44
CLN6-209ENST00000569336 SMC1BQ8NDV3 1235 aa12.32□□□□□ -0.44
CLN6-209ENST00000569336 SUCLG2Q96I99 432 aa12.32□□□□□ -0.44
CLN6-209ENST00000569336 USP44Q9H0E7 712 aa12.32□□□□□ -0.44
CLN6-209ENST00000569336 BICC1Q9H694 974 aaKnown RBP12.32□□□□□ -0.44
CLN6-209ENST00000569336 HACL1Q9UJ83 578 aa12.32□□□□□ -0.44
CLN6-209ENST00000569336 MINPP1Q9UNW1 487 aa12.32□□□□□ -0.44
CLN6-209ENST00000569336 RIMBP2O15034 1052 aa12.31□□□□□ -0.44
CLN6-209ENST00000569336 ECE2O60344 883 aa12.31□□□□□ -0.44
CLN6-209ENST00000569336 BCAR3O75815 825 aa12.31□□□□□ -0.44
CLN6-209ENST00000569336 TRIM27P14373 513 aa12.31□□□□□ -0.44
CLN6-209ENST00000569336 KCNJ4P48050 445 aa12.31□□□□□ -0.44
CLN6-209ENST00000569336 EPHA10Q5JZY3 1008 aa12.31□□□□□ -0.44
CLN6-209ENST00000569336 INTS3Q68E01 1043 aaKnown RBP12.31□□□□□ -0.44
CLN6-209ENST00000569336 CIAPIN1Q6FI81 312 aa12.31□□□□□ -0.44
CLN6-209ENST00000569336 LEMD3Q9Y2U8 911 aa12.31□□□□□ -0.44
CLN6-209ENST00000569336 GNAI3P08754 354 aa12.3□□□□□ -0.44
CLN6-209ENST00000569336 LDHAL6AQ6ZMR3 332 aa12.3□□□□□ -0.44
CLN6-209ENST00000569336 PNMA8AQ86V59 439 aaPredicted RBP12.3□□□□□ -0.44
CLN6-209ENST00000569336 FTSJ3Q8IY81 847 aaKnown RBP12.3□□□□□ -0.44
CLN6-209ENST00000569336 KAZALD1Q96I82 304 aa12.3□□□□□ -0.44
CLN6-209ENST00000569336 DBNDD1Q9H9R9 158 aa12.3□□□□□ -0.44
CLN6-209ENST00000569336 CNNM1Q9NRU3 951 aa12.3□□□□□ -0.44
CLN6-209ENST00000569336 ZNF804BA4D1E1 1349 aa12.3□□□□□ -0.44
CLN6-209ENST00000569336 POTECB2RU33 542 aa12.29□□□□□ -0.44
CLN6-209ENST00000569336 EPHX2P34913 555 aa12.29□□□□□ -0.44
CLN6-209ENST00000569336 CHRNDQ07001 517 aa12.29□□□□□ -0.44
CLN6-209ENST00000569336 CXCL9Q07325 125 aa12.29□□□□□ -0.44
CLN6-209ENST00000569336 ANKRD44Q8N8A2 993 aa12.29□□□□□ -0.44
CLN6-209ENST00000569336 TAF1DQ9H5J8 278 aaPredicted RBP12.29□□□□□ -0.44
CLN6-209ENST00000569336 MYH2Q9UKX2 1941 aa12.29□□□□□ -0.44
CLN6-209ENST00000569336 YDJCA8MPS7 323 aa12.28□□□□□ -0.44
CLN6-209ENST00000569336 RAD17O75943 681 aa12.28□□□□□ -0.44
CLN6-209ENST00000569336 RPS12P25398 132 aaKnown RBP12.28□□□□□ -0.44
CLN6-209ENST00000569336 SCNN1DP51172 638 aa12.28□□□□□ -0.44
CLN6-209ENST00000569336 LDHDQ86WU2 507 aa12.28□□□□□ -0.44
CLN6-209ENST00000569336 GPR101Q96P66 508 aaPredicted RBP12.28□□□□□ -0.44
CLN6-209ENST00000569336 AK9Q5TCS8 1911 aa12.28□□□□□ -0.44
CLN6-209ENST00000569336 MROH5Q6ZUA9 1318 aa12.28□□□□□ -0.44
CLN6-209ENST00000569336 MS4A1P11836 297 aa12.27□□□□□ -0.45
CLN6-209ENST00000569336 DOK7Q18PE1 504 aa12.27□□□□□ -0.45
CLN6-209ENST00000569336 EAPPQ56P03 285 aaPredicted RBP12.27□□□□□ -0.45
CLN6-209ENST00000569336 CHADLQ6NUI6 762 aa12.27□□□□□ -0.45
CLN6-209ENST00000569336 PODNQ7Z5L7 613 aa12.27□□□□□ -0.45
CLN6-209ENST00000569336 CLUAP1Q96AJ1 413 aa12.27□□□□□ -0.45
CLN6-209ENST00000569336 ZNF594Q96JF6 807 aaPredicted RBP12.27□□□□□ -0.45
CLN6-209ENST00000569336 COA1Q9GZY4 146 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms