RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	TLR7	Q9NYK1	1049 aa	Known RBP	7.78	□□□□□ -1.16
UBR1-209	ENST00000569243	CCDC39	Q9UFE4	941 aa		7.78	□□□□□ -1.16
UBR1-209	ENST00000569243	TRIM33	Q9UPN9	1127 aa		7.78	□□□□□ -1.16
UBR1-209	ENST00000569243	PPME1	Q9Y570	386 aa		7.78	□□□□□ -1.16
UBR1-209	ENST00000569243	ATAD2	Q6PL18	1390 aa		7.78	□□□□□ -1.16
UBR1-209	ENST00000569243	GHRH	P01286	108 aa		7.77	□□□□□ -1.17
UBR1-209	ENST00000569243	CD68	P34810	354 aa	Predicted RBP	7.77	□□□□□ -1.17
UBR1-209	ENST00000569243	RTN1	Q16799	776 aa		7.77	□□□□□ -1.17
UBR1-209	ENST00000569243	TMEM132A	Q24JP5	1023 aa		7.77	□□□□□ -1.17
UBR1-209	ENST00000569243	NSUN5	Q96P11	429 aa	Known RBP	7.77	□□□□□ -1.17
UBR1-209	ENST00000569243	LINC01387	J3KSC0	135 aa		7.76	□□□□□ -1.17
UBR1-209	ENST00000569243	BMP3	P12645	472 aa		7.76	□□□□□ -1.17
UBR1-209	ENST00000569243	ATP1A2	P50993	1020 aa		7.76	□□□□□ -1.17
UBR1-209	ENST00000569243	CLDN10	P78369	228 aa		7.76	□□□□□ -1.17
UBR1-209	ENST00000569243	LCE5A	Q5TCM9	118 aa		7.76	□□□□□ -1.17
UBR1-209	ENST00000569243	STAG2	Q8N3U4	1231 aa		7.76	□□□□□ -1.17
UBR1-209	ENST00000569243	SCG3	Q8WXD2	468 aa	Known RBP	7.76	□□□□□ -1.17
UBR1-209	ENST00000569243	MFSD14A	Q96MC6	490 aa		7.76	□□□□□ -1.17
UBR1-209	ENST00000569243		M0R2N6	131 aa		7.75	□□□□□ -1.17
UBR1-209	ENST00000569243	COL19A1	Q14993	1142 aa		7.75	□□□□□ -1.17
UBR1-209	ENST00000569243	TXNDC11	Q6PKC3	985 aa		7.75	□□□□□ -1.17
UBR1-209	ENST00000569243	NFXL1	Q6ZNB6	911 aa		7.75	□□□□□ -1.17
UBR1-209	ENST00000569243	KIAA1211	Q6ZU35	1233 aa		7.75	□□□□□ -1.17
UBR1-209	ENST00000569243	FBXL18	Q96ME1	805 aa		7.75	□□□□□ -1.17
UBR1-209	ENST00000569243	MUC3B	Q9H195	1237 aa		7.75	□□□□□ -1.17
UBR1-209	ENST00000569243	SART1	O43290	800 aa	Known RBP	7.74	□□□□□ -1.17
UBR1-209	ENST00000569243	ARSD	P51689	593 aa		7.74	□□□□□ -1.17
UBR1-209	ENST00000569243	MSMP	Q1L6U9	139 aa		7.74	□□□□□ -1.17
UBR1-209	ENST00000569243	HDGFL1	Q5TGJ6	251 aa		7.74	□□□□□ -1.17
UBR1-209	ENST00000569243	RBSN	Q9H1K0	784 aa		7.74	□□□□□ -1.17
UBR1-209	ENST00000569243	KLK14	Q9P0G3	267 aa		7.74	□□□□□ -1.17
UBR1-209	ENST00000569243	LEMD3	Q9Y2U8	911 aa		7.74	□□□□□ -1.17
UBR1-209	ENST00000569243	ATP9B	O43861	1147 aa		7.73	□□□□□ -1.17
UBR1-209	ENST00000569243	DUOXA2	Q1HG44	320 aa		7.73	□□□□□ -1.17
UBR1-209	ENST00000569243	LARGE2	Q8N3Y3	721 aa		7.73	□□□□□ -1.17
UBR1-209	ENST00000569243	ADAMTS19	Q8TE59	1207 aa		7.73	□□□□□ -1.17
UBR1-209	ENST00000569243	COL26A1	Q96A83	441 aa		7.73	□□□□□ -1.17
UBR1-209	ENST00000569243	ATG3	Q9NT62	314 aa		7.73	□□□□□ -1.17
UBR1-209	ENST00000569243	USP17L3	A6NCW0	530 aa		7.72	□□□□□ -1.17
UBR1-209	ENST00000569243	USP17L4	A6NCW7	530 aa		7.72	□□□□□ -1.17
UBR1-209	ENST00000569243	PSAP	P07602	524 aa		7.72	□□□□□ -1.17
UBR1-209	ENST00000569243	RASA1	P20936	1047 aa		7.72	□□□□□ -1.17
UBR1-209	ENST00000569243	CDC25B	P30305	580 aa		7.72	□□□□□ -1.17
UBR1-209	ENST00000569243	USP17L2	Q6R6M4	530 aa		7.72	□□□□□ -1.17
UBR1-209	ENST00000569243	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	7.72	□□□□□ -1.17
UBR1-209	ENST00000569243	USP17L1	Q7RTZ2	530 aa		7.72	□□□□□ -1.17
UBR1-209	ENST00000569243	VSIG10L	Q86VR7	867 aa		7.72	□□□□□ -1.17
UBR1-209	ENST00000569243	CARD10	Q9BWT7	1032 aa		7.72	□□□□□ -1.17
UBR1-209	ENST00000569243	C11orf16	Q9NQ32	467 aa		7.72	□□□□□ -1.17
UBR1-209	ENST00000569243	USP20	Q9Y2K6	914 aa		7.72	□□□□□ -1.17
UBR1-209	ENST00000569243	PALM3	A6NDB9	673 aa	Predicted RBP	7.71	□□□□□ -1.18
UBR1-209	ENST00000569243	POM121C	A8CG34	1229 aa		7.71	□□□□□ -1.18
UBR1-209	ENST00000569243	PRNP	P04156	253 aa		7.71	□□□□□ -1.18
UBR1-209	ENST00000569243	FOSL1	P15407	271 aa		7.71	□□□□□ -1.18
UBR1-209	ENST00000569243	FNBP4	Q8N3X1	1017 aa	Predicted RBP	7.71	□□□□□ -1.18
UBR1-209	ENST00000569243	FBXL6	Q8N531	539 aa		7.71	□□□□□ -1.18
UBR1-209	ENST00000569243	DDX3Y	O15523	660 aa	Known RBP	7.7	□□□□□ -1.18
UBR1-209	ENST00000569243	CACTIN-AS1	Q8N1I8	211 aa		7.7	□□□□□ -1.18
UBR1-209	ENST00000569243	OGFOD1	Q8N543	542 aa		7.7	□□□□□ -1.18
UBR1-209	ENST00000569243	GIMAP7	Q8NHV1	300 aa		7.7	□□□□□ -1.18
UBR1-209	ENST00000569243	UBASH3B	Q8TF42	649 aa		7.7	□□□□□ -1.18
UBR1-209	ENST00000569243	UCN2	Q96RP3	112 aa		7.7	□□□□□ -1.18
UBR1-209	ENST00000569243	MMP20	O60882	483 aa		7.69	□□□□□ -1.18
UBR1-209	ENST00000569243	ZNF865	P0CJ78	1059 aa	Predicted RBP	7.69	□□□□□ -1.18
UBR1-209	ENST00000569243	PREP	P48147	710 aa		7.69	□□□□□ -1.18
UBR1-209	ENST00000569243	SIX5	Q8N196	739 aa		7.69	□□□□□ -1.18
UBR1-209	ENST00000569243	GAS2L2	Q8NHY3	880 aa		7.69	□□□□□ -1.18
UBR1-209	ENST00000569243	OSBPL1A	Q9BXW6	950 aa		7.69	□□□□□ -1.18
UBR1-209	ENST00000569243	LACRT	Q9GZZ8	138 aa		7.69	□□□□□ -1.18
UBR1-209	ENST00000569243	TM4SF5	O14894	197 aa		7.68	□□□□□ -1.18
UBR1-209	ENST00000569243	XYLB	O75191	536 aa		7.68	□□□□□ -1.18
UBR1-209	ENST00000569243	MICAL2	O94851	1124 aa		7.68	□□□□□ -1.18
UBR1-209	ENST00000569243	PAPLN	O95428	1278 aa		7.68	□□□□□ -1.18
UBR1-209	ENST00000569243	F13B	P05160	661 aa		7.68	□□□□□ -1.18
UBR1-209	ENST00000569243	DGKZ	Q13574	1117 aa		7.68	□□□□□ -1.18
UBR1-209	ENST00000569243	ZNF594	Q96JF6	807 aa	Predicted RBP	7.68	□□□□□ -1.18
UBR1-209	ENST00000569243	MKRN1	Q9UHC7	482 aa	Known RBP	7.68	□□□□□ -1.18
UBR1-209	ENST00000569243	RTCB	Q9Y3I0	505 aa	Known RBP	7.68	□□□□□ -1.18
UBR1-209	ENST00000569243	RBM19	Q9Y4C8	960 aa	Known RBP	7.68	□□□□□ -1.18
UBR1-209	ENST00000569243		A6NJR5	290 aa		7.67	□□□□□ -1.18
UBR1-209	ENST00000569243	PKN1	Q16512	942 aa		7.67	□□□□□ -1.18
UBR1-209	ENST00000569243	PROSER2	Q86WR7	435 aa	Predicted RBP	7.67	□□□□□ -1.18
UBR1-209	ENST00000569243	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	7.67	□□□□□ -1.18
UBR1-209	ENST00000569243	KRTAP5-3	Q6L8H2	238 aa		7.66	□□□□□ -1.18
UBR1-209	ENST00000569243	FLCN	Q8NFG4	579 aa		7.66	□□□□□ -1.18
UBR1-209	ENST00000569243	HIF3A	Q9Y2N7	669 aa		7.66	□□□□□ -1.18
UBR1-209	ENST00000569243	FSCN2	O14926	492 aa		7.65	□□□□□ -1.18
UBR1-209	ENST00000569243	ADAM11	O75078	769 aa		7.65	□□□□□ -1.18
UBR1-209	ENST00000569243	EGFR	P00533	1210 aa		7.65	□□□□□ -1.18
UBR1-209	ENST00000569243	MAP4	P27816	1152 aa	Known RBP	7.65	□□□□□ -1.18
UBR1-209	ENST00000569243	ANKRD34A	Q69YU3	496 aa		7.65	□□□□□ -1.18
UBR1-209	ENST00000569243	CMTR1	Q8N1G2	835 aa	Known RBP	7.65	□□□□□ -1.18
UBR1-209	ENST00000569243	AGBL5	Q8NDL9	886 aa		7.65	□□□□□ -1.18
UBR1-209	ENST00000569243	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	7.65	□□□□□ -1.18
UBR1-209	ENST00000569243	OPLAH	O14841	1288 aa		7.64	□□□□□ -1.19
UBR1-209	ENST00000569243	LGR5	O75473	907 aa		7.64	□□□□□ -1.19
UBR1-209	ENST00000569243	FARP2	O94887	1054 aa	Predicted RBP	7.64	□□□□□ -1.19
UBR1-209	ENST00000569243	DKK1	O94907	266 aa		7.64	□□□□□ -1.19
UBR1-209	ENST00000569243	HOXD8	P13378	290 aa	Predicted RBP	7.64	□□□□□ -1.19
UBR1-209	ENST00000569243	CDC27	P30260	824 aa		7.64	□□□□□ -1.19

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