RNA–Protein interactions for RNA: ENST00000568519.5

NEIL1-219, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 771 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-219ENST00000568519 RPS8P62241 208 aaKnown RBP17.8■□□□□ 0.44
NEIL1-219ENST00000568519 MVPQ14764 893 aaKnown RBP17.8■□□□□ 0.44
NEIL1-219ENST00000568519 SP8Q8IXZ3 490 aa17.8■□□□□ 0.44
NEIL1-219ENST00000568519 RTKN2Q8IZC4 609 aa17.8■□□□□ 0.44
NEIL1-219ENST00000568519 MEIS3Q99687 375 aa17.8■□□□□ 0.44
NEIL1-219ENST00000568519 TAOK3Q9H2K8 898 aa17.8■□□□□ 0.44
NEIL1-219ENST00000568519 SNED1Q8TER0 1413 aa17.8■□□□□ 0.44
NEIL1-219ENST00000568519 ZBTB7BO15156 539 aaPredicted RBP17.79■□□□□ 0.44
NEIL1-219ENST00000568519 MTX1Q13505 466 aa17.79■□□□□ 0.44
NEIL1-219ENST00000568519 CCDC93Q567U6 631 aa17.79■□□□□ 0.44
NEIL1-219ENST00000568519 LMBR1LQ6UX01 489 aa17.79■□□□□ 0.44
NEIL1-219ENST00000568519 OLFM4Q6UX06 510 aa17.79■□□□□ 0.44
NEIL1-219ENST00000568519 ITPRIPQ8IWB1 547 aa17.79■□□□□ 0.44
NEIL1-219ENST00000568519 TMX4Q9H1E5 349 aaPredicted RBP17.79■□□□□ 0.44
NEIL1-219ENST00000568519 BICC1Q9H694 974 aaKnown RBP17.79■□□□□ 0.44
NEIL1-219ENST00000568519 GREM2Q9H772 168 aa17.79■□□□□ 0.44
NEIL1-219ENST00000568519 PRDM10Q9NQV6 1147 aa17.79■□□□□ 0.44
NEIL1-219ENST00000568519 ZNF541Q9H0D2 1346 aa17.78■□□□□ 0.44
NEIL1-219ENST00000568519 ANKRD18BA2A2Z9 1011 aa17.78■□□□□ 0.44
NEIL1-219ENST00000568519 ITGBL1O95965 494 aaPredicted RBP17.78■□□□□ 0.44
NEIL1-219ENST00000568519 GNAI2P04899 355 aa17.78■□□□□ 0.44
NEIL1-219ENST00000568519 ITGA6P23229 1130 aa17.78■□□□□ 0.44
NEIL1-219ENST00000568519 IFIT5Q13325 482 aaKnown RBP17.78■□□□□ 0.44
NEIL1-219ENST00000568519 EPHA10Q5JZY3 1008 aa17.78■□□□□ 0.44
NEIL1-219ENST00000568519 ANKRD18AQ8IVF6 992 aa17.78■□□□□ 0.44
NEIL1-219ENST00000568519 ANKRD44Q8N8A2 993 aa17.78■□□□□ 0.44
NEIL1-219ENST00000568519 PANK1Q8TE04 598 aa17.78■□□□□ 0.44
NEIL1-219ENST00000568519 TAF1DQ9H5J8 278 aaPredicted RBP17.78■□□□□ 0.44
NEIL1-219ENST00000568519 SCN4AP35499 1836 aa17.77■□□□□ 0.44
NEIL1-219ENST00000568519 CTCFP49711 727 aaPredicted RBP17.77■□□□□ 0.44
NEIL1-219ENST00000568519 CCDC57Q2TAC2 916 aa17.77■□□□□ 0.44
NEIL1-219ENST00000568519 FAM161AQ3B820 660 aa17.77■□□□□ 0.44
NEIL1-219ENST00000568519 EAPPQ56P03 285 aaPredicted RBP17.77■□□□□ 0.44
NEIL1-219ENST00000568519 CELF1Q92879 486 aaKnown RBP17.77■□□□□ 0.44
NEIL1-219ENST00000568519 BSDC1Q9NW68 430 aaPredicted RBP17.77■□□□□ 0.44
NEIL1-219ENST00000568519 ADAMTSL1Q8N6G6 1762 aa17.76■□□□□ 0.43
NEIL1-219ENST00000568519 TAF1P21675 1872 aa17.76■□□□□ 0.43
NEIL1-219ENST00000568519 PLIN1O60240 522 aa17.76■□□□□ 0.43
NEIL1-219ENST00000568519 IGHMBP2P38935 993 aaKnown RBP17.76■□□□□ 0.43
NEIL1-219ENST00000568519 PSMD1Q99460 953 aa17.76■□□□□ 0.43
NEIL1-219ENST00000568519 VPS33BQ9H267 617 aa17.76■□□□□ 0.43
NEIL1-219ENST00000568519 SEC31BQ9NQW1 1179 aa17.76■□□□□ 0.43
NEIL1-219ENST00000568519 WBP1LQ9NX94 342 aa17.76■□□□□ 0.43
NEIL1-219ENST00000568519 FBXO3Q9UK99 471 aa17.76■□□□□ 0.43
NEIL1-219ENST00000568519 LRRFIP2Q9Y608 721 aaKnown RBP17.76■□□□□ 0.43
NEIL1-219ENST00000568519 HSPA8P11142 646 aaKnown RBP17.75■□□□□ 0.43
NEIL1-219ENST00000568519 LDHDQ86WU2 507 aa17.75■□□□□ 0.43
NEIL1-219ENST00000568519 ABHD8Q96I13 439 aa17.75■□□□□ 0.43
NEIL1-219ENST00000568519 RTFDC1Q9BY42 306 aaPredicted RBP17.75■□□□□ 0.43
NEIL1-219ENST00000568519 LTBP1Q14766 1721 aa17.75■□□□□ 0.43
NEIL1-219ENST00000568519 TMEM88BA6NKF7 163 aa17.74■□□□□ 0.43
NEIL1-219ENST00000568519 FMR1Q06787 632 aaKnown RBP eCLIP17.74■□□□□ 0.43
NEIL1-219ENST00000568519 AIDAQ96BJ3 306 aa17.74■□□□□ 0.43
NEIL1-219ENST00000568519 PODXL2Q9NZ53 605 aa17.74■□□□□ 0.43
NEIL1-219ENST00000568519 COL4A1P02462 1669 aa17.74■□□□□ 0.43
NEIL1-219ENST00000568519 FKBP4Q02790 459 aaKnown RBP eCLIP17.73■□□□□ 0.43
NEIL1-219ENST00000568519 AAMPQ13685 434 aa17.73■□□□□ 0.43
NEIL1-219ENST00000568519 MAP1SQ66K74 1059 aaPredicted RBP17.73■□□□□ 0.43
NEIL1-219ENST00000568519 SUPT20HQ8NEM7 779 aa17.73■□□□□ 0.43
NEIL1-219ENST00000568519 L3MBTL3Q96JM7 780 aaPredicted RBP17.73■□□□□ 0.43
NEIL1-219ENST00000568519 ZNF277Q9NRM2 450 aaPredicted RBP17.73■□□□□ 0.43
NEIL1-219ENST00000568519 CLEC11AQ9Y240 323 aa17.73■□□□□ 0.43
NEIL1-219ENST00000568519 COG6Q9Y2V7 657 aa17.73■□□□□ 0.43
NEIL1-219ENST00000568519 CHMP3Q9Y3E7 222 aa17.73■□□□□ 0.43
NEIL1-219ENST00000568519 CCDC85AQ96PX6 553 aaPredicted RBP17.72■□□□□ 0.43
NEIL1-219ENST00000568519 MPHOSPH8Q99549 860 aa17.72■□□□□ 0.43
NEIL1-219ENST00000568519 ZBTB40Q9NUA8 1239 aa17.72■□□□□ 0.43
NEIL1-219ENST00000568519 SPEF2Q9C093 1822 aa17.72■□□□□ 0.43
NEIL1-219ENST00000568519 C20orf194Q5TEA3 1177 aa17.71■□□□□ 0.43
NEIL1-219ENST00000568519 MPNDQ8N594 471 aa17.71■□□□□ 0.43
NEIL1-219ENST00000568519 ANKRD2Q9GZV1 360 aa17.71■□□□□ 0.43
NEIL1-219ENST00000568519 XDHP47989 1333 aa17.71■□□□□ 0.42
NEIL1-219ENST00000568519 IQCA1LA6NCM1 817 aa17.7■□□□□ 0.42
NEIL1-219ENST00000568519 RFX5P48382 616 aaPredicted RBP17.7■□□□□ 0.42
NEIL1-219ENST00000568519 TAF7LQ5H9L4 462 aa17.7■□□□□ 0.42
NEIL1-219ENST00000568519 DPP8Q6V1X1 898 aaPredicted RBP17.7■□□□□ 0.42
NEIL1-219ENST00000568519 SLC51AQ86UW1 340 aa17.7■□□□□ 0.42
NEIL1-219ENST00000568519 COPRSQ9NQ92 184 aa17.7■□□□□ 0.42
NEIL1-219ENST00000568519 MINPP1Q9UNW1 487 aa17.7■□□□□ 0.42
NEIL1-219ENST00000568519 DUOX1Q9NRD9 1551 aa17.7■□□□□ 0.42
NEIL1-219ENST00000568519 A0A1B0GUL6 1792 aa17.69■□□□□ 0.42
NEIL1-219ENST00000568519 COL4A5P29400 1685 aa17.69■□□□□ 0.42
NEIL1-219ENST00000568519 CIAO1O76071 339 aa17.69■□□□□ 0.42
NEIL1-219ENST00000568519 EPHX2P34913 555 aa17.69■□□□□ 0.42
NEIL1-219ENST00000568519 LDHAL6AQ6ZMR3 332 aa17.69■□□□□ 0.42
NEIL1-219ENST00000568519 RPAP2Q8IXW5 612 aaPredicted RBP17.69■□□□□ 0.42
NEIL1-219ENST00000568519 MROH5Q6ZUA9 1318 aa17.69■□□□□ 0.42
NEIL1-219ENST00000568519 RASSF10A6NK89 507 aa17.68■□□□□ 0.42
NEIL1-219ENST00000568519 SRGAP3O43295 1099 aa17.68■□□□□ 0.42
NEIL1-219ENST00000568519 ATP8B2P98198 1209 aa17.68■□□□□ 0.42
NEIL1-219ENST00000568519 PTPN12Q05209 780 aaKnown RBP17.68■□□□□ 0.42
NEIL1-219ENST00000568519 DEFB115Q30KQ5 88 aa17.68■□□□□ 0.42
NEIL1-219ENST00000568519 CNTROBQ8N137 903 aa17.68■□□□□ 0.42
NEIL1-219ENST00000568519 SSH3Q8TE77 659 aa17.68■□□□□ 0.42
NEIL1-219ENST00000568519 HACL1Q9UJ83 578 aa17.68■□□□□ 0.42
NEIL1-219ENST00000568519 LEMD3Q9Y2U8 911 aa17.68■□□□□ 0.42
NEIL1-219ENST00000568519 WDR33Q9C0J8 1336 aaKnown RBP17.68■□□□□ 0.42
NEIL1-219ENST00000568519 ATP2B4P23634 1241 aa17.67■□□□□ 0.42
NEIL1-219ENST00000568519 POLA2Q14181 598 aa17.67■□□□□ 0.42
NEIL1-219ENST00000568519 TSKSQ9UJT2 592 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms