RNA–Protein interactions for RNA: ENST00000568454.5

TSC2-222, Transcript of TSC complex subunit 2, human

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSC2-222	ENST00000568454	ZBTB43	O43298	467 aa		18.88	■□□□□ 0.61
TSC2-222	ENST00000568454	ZFY	P08048	801 aa	Predicted RBP	18.88	■□□□□ 0.61
TSC2-222	ENST00000568454	DAAM2	Q86T65	1068 aa		18.88	■□□□□ 0.61
TSC2-222	ENST00000568454	MAP3K2	Q9Y2U5	619 aa		18.88	■□□□□ 0.61
TSC2-222	ENST00000568454	SREK1	Q8WXA9	508 aa	Known RBP	18.88	■□□□□ 0.61
TSC2-222	ENST00000568454	ABCC5	O15440	1437 aa		18.88	■□□□□ 0.61
TSC2-222	ENST00000568454	CPLX4	Q7Z7G2	160 aa		18.88	■□□□□ 0.61
TSC2-222	ENST00000568454	TMTC2	Q8N394	836 aa		18.88	■□□□□ 0.61
TSC2-222	ENST00000568454	CAMSAP2	Q08AD1	1489 aa		18.87	■□□□□ 0.61
TSC2-222	ENST00000568454	MAGI1	Q96QZ7	1491 aa	Predicted RBP	18.87	■□□□□ 0.61
TSC2-222	ENST00000568454	MXRA7	P84157	204 aa		18.87	■□□□□ 0.61
TSC2-222	ENST00000568454	LAMC3	Q9Y6N6	1575 aa		18.87	■□□□□ 0.61
TSC2-222	ENST00000568454	IGSF3	O75054	1194 aa		18.87	■□□□□ 0.61
TSC2-222	ENST00000568454	FERMT1	Q9BQL6	677 aa		18.87	■□□□□ 0.61
TSC2-222	ENST00000568454	KAT14	Q9H8E8	782 aa		18.87	■□□□□ 0.61
TSC2-222	ENST00000568454	PDE4B	Q07343	736 aa		18.87	■□□□□ 0.61
TSC2-222	ENST00000568454	ZNF569	Q5MCW4	686 aa		18.87	■□□□□ 0.61
TSC2-222	ENST00000568454	RRAGD	Q9NQL2	400 aa	Predicted RBP	18.87	■□□□□ 0.61
TSC2-222	ENST00000568454	IFNK	Q9P0W0	207 aa		18.87	■□□□□ 0.61
TSC2-222	ENST00000568454	CEP83	Q9Y592	693 aa		18.87	■□□□□ 0.61
TSC2-222	ENST00000568454	HSP90AA4P	Q58FG1	418 aa		18.87	■□□□□ 0.61
TSC2-222	ENST00000568454	FERMT2	Q96AC1	680 aa		18.87	■□□□□ 0.61
TSC2-222	ENST00000568454	SMC6	Q96SB8	1091 aa		18.87	■□□□□ 0.61
TSC2-222	ENST00000568454	CCDC42	Q96M95	316 aa		18.86	■□□□□ 0.61
TSC2-222	ENST00000568454	KRT23	Q9C075	422 aa		18.86	■□□□□ 0.61
TSC2-222	ENST00000568454	PUF60	Q9UHX1	559 aa	Known RBP	18.86	■□□□□ 0.61
TSC2-222	ENST00000568454	PEG3	Q9GZU2	1588 aa		18.86	■□□□□ 0.61
TSC2-222	ENST00000568454	ANKRD36B	Q8N2N9	1353 aa		18.86	■□□□□ 0.61
TSC2-222	ENST00000568454	ZEB2	O60315	1214 aa		18.86	■□□□□ 0.61
TSC2-222	ENST00000568454	PHACTR2	O75167	634 aa		18.86	■□□□□ 0.61
TSC2-222	ENST00000568454	EVC	P57679	992 aa		18.86	■□□□□ 0.61
TSC2-222	ENST00000568454	WTAP	Q15007	396 aa		18.86	■□□□□ 0.61
TSC2-222	ENST00000568454	RAB11FIP4	Q86YS3	637 aa		18.86	■□□□□ 0.61
TSC2-222	ENST00000568454	SLF2	Q8IX21	1173 aa		18.86	■□□□□ 0.61
TSC2-222	ENST00000568454	GTF3C6	Q969F1	213 aa		18.86	■□□□□ 0.61
TSC2-222	ENST00000568454	KARS	Q15046	597 aa	Known RBP	18.86	■□□□□ 0.61
TSC2-222	ENST00000568454	TBCA	O75347	108 aa	Known RBP	18.85	■□□□□ 0.61
TSC2-222	ENST00000568454	RHOXF2B	P0C7M4	288 aa		18.85	■□□□□ 0.61
TSC2-222	ENST00000568454	TUBB2A	Q13885	445 aa		18.85	■□□□□ 0.61
TSC2-222	ENST00000568454	B4GALNT4	Q76KP1	1039 aa		18.85	■□□□□ 0.61
TSC2-222	ENST00000568454	SYCP3	Q8IZU3	236 aa		18.85	■□□□□ 0.61
TSC2-222	ENST00000568454	SCLT1	Q96NL6	688 aa		18.85	■□□□□ 0.61
TSC2-222	ENST00000568454	SELENOS	Q9BQE4	189 aa		18.85	■□□□□ 0.61
TSC2-222	ENST00000568454	RHOXF2	Q9BQY4	288 aa		18.85	■□□□□ 0.61
TSC2-222	ENST00000568454	TUBB2B	Q9BVA1	445 aa		18.85	■□□□□ 0.61
TSC2-222	ENST00000568454		Q6ZUG5	572 aa		18.85	■□□□□ 0.61
TSC2-222	ENST00000568454		A0A1B0GUA9	196 aa		18.85	■□□□□ 0.61
TSC2-222	ENST00000568454	PPFIA3	O75145	1194 aa		18.85	■□□□□ 0.61
TSC2-222	ENST00000568454	PPP2R3A	Q06190	1150 aa		18.85	■□□□□ 0.61
TSC2-222	ENST00000568454	KRBA2	Q6ZNG9	492 aa		18.85	■□□□□ 0.61
TSC2-222	ENST00000568454	CCDC97	Q96F63	343 aa	Predicted RBP	18.85	■□□□□ 0.61
TSC2-222	ENST00000568454	MEIS3	Q99687	375 aa		18.85	■□□□□ 0.61
TSC2-222	ENST00000568454	PAIP2	Q9BPZ3	127 aa	Known RBP	18.85	■□□□□ 0.61
TSC2-222	ENST00000568454	SAMD15	Q9P1V8	674 aa		18.85	■□□□□ 0.61
TSC2-222	ENST00000568454	BICRA	Q9NZM4	1560 aa		18.85	■□□□□ 0.61
TSC2-222	ENST00000568454	MYRIP	Q8NFW9	859 aa		18.85	■□□□□ 0.61
TSC2-222	ENST00000568454	CFAP58	Q5T655	872 aa		18.84	■□□□□ 0.61
TSC2-222	ENST00000568454	ATL3	Q6DD88	541 aa		18.84	■□□□□ 0.61
TSC2-222	ENST00000568454	LZTFL1	Q9NQ48	299 aa		18.84	■□□□□ 0.61
TSC2-222	ENST00000568454	CNNM2	Q9H8M5	875 aa		18.84	■□□□□ 0.61
TSC2-222	ENST00000568454	TSPY2	A6NKD2	308 aa		18.84	■□□□□ 0.61
TSC2-222	ENST00000568454	CNGA4	Q8IV77	575 aa		18.84	■□□□□ 0.61
TSC2-222	ENST00000568454	GUCA1B	Q9UMX6	200 aa		18.84	■□□□□ 0.61
TSC2-222	ENST00000568454	PI4KAP2	A4QPH2	592 aa		18.84	■□□□□ 0.61
TSC2-222	ENST00000568454		A6NNZ2	444 aa		18.84	■□□□□ 0.61
TSC2-222	ENST00000568454	ATP2A1	O14983	1001 aa		18.84	■□□□□ 0.61
TSC2-222	ENST00000568454	MARCKS	P29966	332 aa	Predicted RBP	18.84	■□□□□ 0.61
TSC2-222	ENST00000568454	TUBB8	Q3ZCM7	444 aa		18.84	■□□□□ 0.61
TSC2-222	ENST00000568454	PI4KAP1	Q8N8J0	262 aa		18.84	■□□□□ 0.61
TSC2-222	ENST00000568454	TRMT112	Q9UI30	125 aa	Known RBP	18.84	■□□□□ 0.61
TSC2-222	ENST00000568454	PTCD1	O75127	700 aa	Known RBP	18.83	■□□□□ 0.61
TSC2-222	ENST00000568454	U2AF2	P26368	475 aa	Known RBP eCLIP	18.83	■□□□□ 0.61
TSC2-222	ENST00000568454	TNNC1	P63316	161 aa		18.83	■□□□□ 0.61
TSC2-222	ENST00000568454	MCMDC2	Q4G0Z9	681 aa		18.83	■□□□□ 0.61
TSC2-222	ENST00000568454	UQCRFS1P1	P0C7P4	283 aa		18.83	■□□□□ 0.61
TSC2-222	ENST00000568454	ZBTB16	Q05516	673 aa		18.83	■□□□□ 0.61
TSC2-222	ENST00000568454	RTN1	Q16799	776 aa		18.83	■□□□□ 0.6
TSC2-222	ENST00000568454	ERMN	Q8TAM6	284 aa		18.83	■□□□□ 0.6
TSC2-222	ENST00000568454	CAPZA3	Q96KX2	299 aa		18.83	■□□□□ 0.6
TSC2-222	ENST00000568454	SNRK	Q9NRH2	765 aa		18.83	■□□□□ 0.6
TSC2-222	ENST00000568454	TMOD3	Q9NYL9	352 aa		18.83	■□□□□ 0.6
TSC2-222	ENST00000568454	ATP8B2	P98198	1209 aa		18.83	■□□□□ 0.6
TSC2-222	ENST00000568454	DDX46	Q7L014	1031 aa	Known RBP	18.83	■□□□□ 0.6
TSC2-222	ENST00000568454	TCEANC2	Q96MN5	208 aa		18.83	■□□□□ 0.6
TSC2-222	ENST00000568454	RBSN	Q9H1K0	784 aa		18.83	■□□□□ 0.6
TSC2-222	ENST00000568454	DISP3	Q9P2K9	1392 aa		18.83	■□□□□ 0.6
TSC2-222	ENST00000568454	LACTB	P83111	547 aa	Predicted RBP	18.83	■□□□□ 0.6
TSC2-222	ENST00000568454	AFAP1L1	Q8TED9	768 aa		18.83	■□□□□ 0.6
TSC2-222	ENST00000568454	CFAP57	Q96MR6	1250 aa		18.83	■□□□□ 0.6
TSC2-222	ENST00000568454	STIM2	Q9P246	746 aa		18.83	■□□□□ 0.6
TSC2-222	ENST00000568454	CCDC160	A6NGH7	325 aa		18.82	■□□□□ 0.6
TSC2-222	ENST00000568454	AK2	P54819	239 aa		18.82	■□□□□ 0.6
TSC2-222	ENST00000568454	BICDL1	Q6ZP65	573 aa		18.82	■□□□□ 0.6
TSC2-222	ENST00000568454	BRAP	Q7Z569	592 aa		18.82	■□□□□ 0.6
TSC2-222	ENST00000568454	POTED	Q86YR6	584 aa		18.82	■□□□□ 0.6
TSC2-222	ENST00000568454	ZGPAT	Q8N5A5	531 aa	Known RBP	18.82	■□□□□ 0.6
TSC2-222	ENST00000568454	CCDC174	Q6PII3	467 aa		18.82	■□□□□ 0.6
TSC2-222	ENST00000568454	CWC25	Q9NXE8	425 aa	Predicted RBP	18.82	■□□□□ 0.6
TSC2-222	ENST00000568454	KRT13	P13646	458 aa		18.82	■□□□□ 0.6
TSC2-222	ENST00000568454	BICDL2	A1A5D9	508 aa		18.82	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms