RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 RIC3Q7Z5B4 369 aa19.5■□□□□ 0.71
COMMD4-223ENST00000568301 KCNQ5Q9NR82 932 aa19.5■□□□□ 0.71
COMMD4-223ENST00000568301 IFT57Q9NWB7 429 aa19.5■□□□□ 0.71
COMMD4-223ENST00000568301 POLLQ9UGP5 575 aa19.5■□□□□ 0.71
COMMD4-223ENST00000568301 COL4A1P02462 1669 aa19.49■□□□□ 0.71
COMMD4-223ENST00000568301 GNAI1P63096 354 aa19.49■□□□□ 0.71
COMMD4-223ENST00000568301 C6orf229H3BNL8 230 aa19.48■□□□□ 0.71
COMMD4-223ENST00000568301 APAF1O14727 1248 aa19.48■□□□□ 0.71
COMMD4-223ENST00000568301 GPSM2P81274 684 aa19.48■□□□□ 0.71
COMMD4-223ENST00000568301 GOLGA2Q08379 1002 aa19.48■□□□□ 0.71
COMMD4-223ENST00000568301 RTL5Q5HYW3 569 aaPredicted RBP19.48■□□□□ 0.71
COMMD4-223ENST00000568301 KRT26Q7Z3Y9 468 aa19.48■□□□□ 0.71
COMMD4-223ENST00000568301 ZBTB38Q8NAP3 1195 aaPredicted RBP19.48■□□□□ 0.71
COMMD4-223ENST00000568301 EYA3Q99504 573 aa19.48■□□□□ 0.71
COMMD4-223ENST00000568301 CHMP4AQ9BY43 222 aa19.48■□□□□ 0.71
COMMD4-223ENST00000568301 FAM155AB1AL88 458 aaPredicted RBP19.47■□□□□ 0.71
COMMD4-223ENST00000568301 ADM5C9JUS6 153 aa19.47■□□□□ 0.71
COMMD4-223ENST00000568301 DOK7Q18PE1 504 aa19.47■□□□□ 0.71
COMMD4-223ENST00000568301 RBM26Q5T8P6 1007 aaKnown RBP19.47■□□□□ 0.71
COMMD4-223ENST00000568301 RTL9Q8NET4 1388 aa19.46■□□□□ 0.71
COMMD4-223ENST00000568301 RPS12P25398 132 aaKnown RBP19.46■□□□□ 0.71
COMMD4-223ENST00000568301 RGMBQ6NW40 437 aa19.46■□□□□ 0.71
COMMD4-223ENST00000568301 CCDC191Q8NCU4 936 aa19.46■□□□□ 0.71
COMMD4-223ENST00000568301 TBC1D16Q8TBP0 767 aa19.46■□□□□ 0.71
COMMD4-223ENST00000568301 PHAXQ9H814 394 aaKnown RBP19.46■□□□□ 0.71
COMMD4-223ENST00000568301 GBA2Q9HCG7 927 aaPredicted RBP19.46■□□□□ 0.71
COMMD4-223ENST00000568301 ELL2O00472 640 aaPredicted RBP19.45■□□□□ 0.7
COMMD4-223ENST00000568301 ECE2O60344 883 aa19.45■□□□□ 0.7
COMMD4-223ENST00000568301 C2orf69Q8N8R5 385 aa19.45■□□□□ 0.7
COMMD4-223ENST00000568301 PODXL2Q9NZ53 605 aa19.45■□□□□ 0.7
COMMD4-223ENST00000568301 DCPSQ96C86 337 aaKnown RBP19.44■□□□□ 0.7
COMMD4-223ENST00000568301 ZC3H12CQ9C0D7 883 aaKnown RBP19.44■□□□□ 0.7
COMMD4-223ENST00000568301 SCN9AQ15858 1988 aa19.43■□□□□ 0.7
COMMD4-223ENST00000568301 PCCAP05165 728 aaPredicted RBP19.43■□□□□ 0.7
COMMD4-223ENST00000568301 ZNF157P51786 506 aaPredicted RBP19.43■□□□□ 0.7
COMMD4-223ENST00000568301 KIF23Q02241 960 aaPredicted RBP19.43■□□□□ 0.7
COMMD4-223ENST00000568301 C8orf58Q8NAV2 365 aa19.43■□□□□ 0.7
COMMD4-223ENST00000568301 MYD88Q99836 296 aa19.43■□□□□ 0.7
COMMD4-223ENST00000568301 PDE8AO60658 829 aa19.42■□□□□ 0.7
COMMD4-223ENST00000568301 DDX58O95786 925 aaKnown RBP19.42■□□□□ 0.7
COMMD4-223ENST00000568301 KIF4BQ2VIQ3 1234 aa19.42■□□□□ 0.7
COMMD4-223ENST00000568301 CCDC152Q4G0S7 254 aa19.42■□□□□ 0.7
COMMD4-223ENST00000568301 CCDC30Q5VVM6 783 aa19.42■□□□□ 0.7
COMMD4-223ENST00000568301 CCDC102AQ96A19 550 aa19.42■□□□□ 0.7
COMMD4-223ENST00000568301 METTL22Q9BUU2 404 aaPredicted RBP19.42■□□□□ 0.7
COMMD4-223ENST00000568301 SEC31BQ9NQW1 1179 aa19.42■□□□□ 0.7
COMMD4-223ENST00000568301 CWC25Q9NXE8 425 aaPredicted RBP19.42■□□□□ 0.7
COMMD4-223ENST00000568301 ASTN2O75129 1339 aaPredicted RBP19.42■□□□□ 0.7
COMMD4-223ENST00000568301 VIL1P09327 827 aaKnown RBP19.41■□□□□ 0.7
COMMD4-223ENST00000568301 RNF186Q9NXI6 227 aa19.41■□□□□ 0.7
COMMD4-223ENST00000568301 SAGE1Q9NXZ1 904 aa19.41■□□□□ 0.7
COMMD4-223ENST00000568301 ANKIB1Q9P2G1 1089 aa19.41■□□□□ 0.7
COMMD4-223ENST00000568301 TRPA1O75762 1119 aa19.4■□□□□ 0.7
COMMD4-223ENST00000568301 GGA3Q9NZ52 723 aa19.4■□□□□ 0.7
COMMD4-223ENST00000568301 AKAP11Q9UKA4 1901 aa19.39■□□□□ 0.7
COMMD4-223ENST00000568301 G3V3G9 751 aa19.39■□□□□ 0.69
COMMD4-223ENST00000568301 UFL1O94874 794 aa19.39■□□□□ 0.69
COMMD4-223ENST00000568301 DCAF8Q5TAQ9 597 aa19.39■□□□□ 0.69
COMMD4-223ENST00000568301 SULF1Q8IWU6 871 aa19.39■□□□□ 0.69
COMMD4-223ENST00000568301 GGA1Q9UJY5 639 aa19.39■□□□□ 0.69
COMMD4-223ENST00000568301 SLC10A3P09131 477 aa19.38■□□□□ 0.69
COMMD4-223ENST00000568301 CDCA5Q96FF9 252 aa19.38■□□□□ 0.69
COMMD4-223ENST00000568301 CSRNP1Q96S65 589 aa19.38■□□□□ 0.69
COMMD4-223ENST00000568301 KSR2Q6VAB6 950 aa19.37■□□□□ 0.69
COMMD4-223ENST00000568301 ANKRD18AQ8IVF6 992 aa19.37■□□□□ 0.69
COMMD4-223ENST00000568301 JARID2Q92833 1246 aaPredicted RBP19.37■□□□□ 0.69
COMMD4-223ENST00000568301 MAP3K2Q9Y2U5 619 aa19.37■□□□□ 0.69
COMMD4-223ENST00000568301 PDE4DIPQ5VU43 2346 aa19.36■□□□□ 0.69
COMMD4-223ENST00000568301 XDHP47989 1333 aa19.36■□□□□ 0.69
COMMD4-223ENST00000568301 SCARF1Q14162 830 aa19.36■□□□□ 0.69
COMMD4-223ENST00000568301 ANGEL2Q5VTE6 544 aaKnown RBP19.36■□□□□ 0.69
COMMD4-223ENST00000568301 TSPYL6Q8N831 410 aa19.36■□□□□ 0.69
COMMD4-223ENST00000568301 AGBL3Q8NEM8 1001 aa19.36■□□□□ 0.69
COMMD4-223ENST00000568301 PSME4Q14997 1843 aa19.36■□□□□ 0.69
COMMD4-223ENST00000568301 ZNF609O15014 1411 aa19.35■□□□□ 0.69
COMMD4-223ENST00000568301 PI4KAP2A4QPH2 592 aa19.35■□□□□ 0.69
COMMD4-223ENST00000568301 SOX10P56693 466 aa19.35■□□□□ 0.69
COMMD4-223ENST00000568301 ZNF280AP59817 542 aaPredicted RBP19.35■□□□□ 0.69
COMMD4-223ENST00000568301 RSBN1LQ6PCB5 846 aaPredicted RBP19.35■□□□□ 0.69
COMMD4-223ENST00000568301 PI4KAP1Q8N8J0 262 aa19.35■□□□□ 0.69
COMMD4-223ENST00000568301 CCDC85AQ96PX6 553 aaPredicted RBP19.35■□□□□ 0.69
COMMD4-223ENST00000568301 MYH3P11055 1940 aa19.34■□□□□ 0.69
COMMD4-223ENST00000568301 IGKV5-2P06315 115 aa19.34■□□□□ 0.69
COMMD4-223ENST00000568301 ATP2B4P23634 1241 aa19.34■□□□□ 0.69
COMMD4-223ENST00000568301 CCDC27Q2M243 656 aa19.34■□□□□ 0.69
COMMD4-223ENST00000568301 PODNQ7Z5L7 613 aa19.34■□□□□ 0.69
COMMD4-223ENST00000568301 RASAL3Q86YV0 1011 aa19.34■□□□□ 0.69
COMMD4-223ENST00000568301 CDC5LQ99459 802 aaKnown RBP19.34■□□□□ 0.69
COMMD4-223ENST00000568301 CTSWP56202 376 aa19.33■□□□□ 0.68
COMMD4-223ENST00000568301 NEXNQ0ZGT2 675 aa19.33■□□□□ 0.68
COMMD4-223ENST00000568301 TTLL11Q8NHH1 800 aa19.33■□□□□ 0.68
COMMD4-223ENST00000568301 GMLQ99445 158 aa19.33■□□□□ 0.68
COMMD4-223ENST00000568301 STK31Q9BXU1 1019 aa19.33■□□□□ 0.68
COMMD4-223ENST00000568301 SCAF8Q9UPN6 1271 aaKnown RBP19.33■□□□□ 0.68
COMMD4-223ENST00000568301 MYOZ2Q9NPC6 264 aa19.32■□□□□ 0.68
COMMD4-223ENST00000568301 BSDC1Q9NW68 430 aaPredicted RBP19.32■□□□□ 0.68
COMMD4-223ENST00000568301 USP17L3A6NCW0 530 aa19.31■□□□□ 0.68
COMMD4-223ENST00000568301 USP17L4A6NCW7 530 aa19.31■□□□□ 0.68
COMMD4-223ENST00000568301 USP17L8P0C7I0 530 aa19.31■□□□□ 0.68
COMMD4-223ENST00000568301 MOB2Q70IA6 237 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms