RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 TMEM57Q8N5G2 664 aa16.36■□□□□ 0.21
CNOT1-213ENST00000568158 ANKRD44Q8N8A2 993 aa16.36■□□□□ 0.21
CNOT1-213ENST00000568158 TBC1D16Q8TBP0 767 aa16.36■□□□□ 0.21
CNOT1-213ENST00000568158 MPHOSPH8Q99549 860 aa16.36■□□□□ 0.21
CNOT1-213ENST00000568158 MEIS3Q99687 375 aa16.36■□□□□ 0.21
CNOT1-213ENST00000568158 RRAGCQ9HB90 399 aa16.36■□□□□ 0.21
CNOT1-213ENST00000568158 NMRK2Q9NPI5 230 aa16.36■□□□□ 0.21
CNOT1-213ENST00000568158 ANKIB1Q9P2G1 1089 aa16.36■□□□□ 0.21
CNOT1-213ENST00000568158 RCAN3Q9UKA8 241 aa16.36■□□□□ 0.21
CNOT1-213ENST00000568158 DDNO94850 711 aaPredicted RBP16.35■□□□□ 0.21
CNOT1-213ENST00000568158 DPY19L2Q6NUT2 758 aa16.35■□□□□ 0.21
CNOT1-213ENST00000568158 JDP2Q8WYK2 163 aa16.35■□□□□ 0.21
CNOT1-213ENST00000568158 VPS33BQ9H267 617 aa16.35■□□□□ 0.21
CNOT1-213ENST00000568158 PODXL2Q9NZ53 605 aa16.35■□□□□ 0.21
CNOT1-213ENST00000568158 COL4A5P29400 1685 aa16.34■□□□□ 0.21
CNOT1-213ENST00000568158 SPEF2Q9C093 1822 aa16.34■□□□□ 0.21
CNOT1-213ENST00000568158 FZD9O00144 591 aa16.34■□□□□ 0.21
CNOT1-213ENST00000568158 UBTFL1P0CB47 393 aaPredicted RBP16.34■□□□□ 0.21
CNOT1-213ENST00000568158 RLBP1P12271 317 aa16.34■□□□□ 0.21
CNOT1-213ENST00000568158 KIAA2012Q0VF49 1180 aa16.34■□□□□ 0.21
CNOT1-213ENST00000568158 WASHC4Q2M389 1173 aa16.34■□□□□ 0.21
CNOT1-213ENST00000568158 RABL6Q3YEC7 729 aaPredicted RBP16.34■□□□□ 0.21
CNOT1-213ENST00000568158 ZC3H4Q9UPT8 1303 aaKnown RBP16.34■□□□□ 0.21
CNOT1-213ENST00000568158 PLIN1O60240 522 aa16.33■□□□□ 0.2
CNOT1-213ENST00000568158 UFL1O94874 794 aa16.33■□□□□ 0.2
CNOT1-213ENST00000568158 TAF7LQ5H9L4 462 aa16.33■□□□□ 0.2
CNOT1-213ENST00000568158 LDHAL6AQ6ZMR3 332 aa16.33■□□□□ 0.2
CNOT1-213ENST00000568158 NIM1KQ8IY84 436 aa16.33■□□□□ 0.2
CNOT1-213ENST00000568158 DZIP1LQ8IYY4 767 aaKnown RBP16.33■□□□□ 0.2
CNOT1-213ENST00000568158 HELBQ8NG08 1087 aaPredicted RBP16.33■□□□□ 0.2
CNOT1-213ENST00000568158 PUS3Q9BZE2 481 aaKnown RBP16.33■□□□□ 0.2
CNOT1-213ENST00000568158 GGA1Q9UJY5 639 aa16.33■□□□□ 0.2
CNOT1-213ENST00000568158 LRRFIP2Q9Y608 721 aaKnown RBP16.33■□□□□ 0.2
CNOT1-213ENST00000568158 KDM2BQ8NHM5 1336 aa16.33■□□□□ 0.2
CNOT1-213ENST00000568158 ZNF541Q9H0D2 1346 aa16.33■□□□□ 0.2
CNOT1-213ENST00000568158 LRRC37AA6NMS7 1700 aa16.33■□□□□ 0.2
CNOT1-213ENST00000568158 POTECB2RU33 542 aa16.32■□□□□ 0.2
CNOT1-213ENST00000568158 KIF3CO14782 793 aa16.32■□□□□ 0.2
CNOT1-213ENST00000568158 ATP2B4P23634 1241 aa16.32■□□□□ 0.2
CNOT1-213ENST00000568158 XDHP47989 1333 aa16.32■□□□□ 0.2
CNOT1-213ENST00000568158 CHRNDQ07001 517 aa16.32■□□□□ 0.2
CNOT1-213ENST00000568158 DOK7Q18PE1 504 aa16.32■□□□□ 0.2
CNOT1-213ENST00000568158 TIAM2Q8IVF5 1701 aa16.32■□□□□ 0.2
CNOT1-213ENST00000568158 ZC3H12CQ9C0D7 883 aaKnown RBP16.32■□□□□ 0.2
CNOT1-213ENST00000568158 DUOX1Q9NRD9 1551 aa16.31■□□□□ 0.2
CNOT1-213ENST00000568158 SNAP23O00161 211 aa16.31■□□□□ 0.2
CNOT1-213ENST00000568158 TAF5LO75529 589 aa16.31■□□□□ 0.2
CNOT1-213ENST00000568158 EIF6P56537 245 aaKnown RBP16.31■□□□□ 0.2
CNOT1-213ENST00000568158 KLHDC4Q8TBB5 520 aa16.31■□□□□ 0.2
CNOT1-213ENST00000568158 PANK1Q8TE04 598 aa16.31■□□□□ 0.2
CNOT1-213ENST00000568158 EYA3Q99504 573 aa16.31■□□□□ 0.2
CNOT1-213ENST00000568158 CNNM1Q9NRU3 951 aa16.31■□□□□ 0.2
CNOT1-213ENST00000568158 ZNRF3Q9ULT6 936 aa16.31■□□□□ 0.2
CNOT1-213ENST00000568158 GNAI3P08754 354 aa16.3■□□□□ 0.2
CNOT1-213ENST00000568158 CXCL9Q07325 125 aa16.3■□□□□ 0.2
CNOT1-213ENST00000568158 FTSJ3Q8IY81 847 aaKnown RBP16.3■□□□□ 0.2
CNOT1-213ENST00000568158 ANKRD2Q9GZV1 360 aa16.3■□□□□ 0.2
CNOT1-213ENST00000568158 DBNDD1Q9H9R9 158 aa16.3■□□□□ 0.2
CNOT1-213ENST00000568158 KCNQ5Q9NR82 932 aa16.3■□□□□ 0.2
CNOT1-213ENST00000568158 GJA3Q9Y6H8 435 aa16.3■□□□□ 0.2
CNOT1-213ENST00000568158 YDJCA8MPS7 323 aa16.29■□□□□ 0.2
CNOT1-213ENST00000568158 RAD17O75943 681 aa16.29■□□□□ 0.2
CNOT1-213ENST00000568158 RFX5P48382 616 aaPredicted RBP16.29■□□□□ 0.2
CNOT1-213ENST00000568158 LRRC24Q50LG9 513 aa16.29■□□□□ 0.2
CNOT1-213ENST00000568158 HDAC5Q9UQL6 1122 aa16.29■□□□□ 0.2
CNOT1-213ENST00000568158 LEMD3Q9Y2U8 911 aa16.29■□□□□ 0.2
CNOT1-213ENST00000568158 RIPOR2Q9Y4F9 1068 aa16.29■□□□□ 0.2
CNOT1-213ENST00000568158 LTBP1Q14766 1721 aa16.28■□□□□ 0.2
CNOT1-213ENST00000568158 G3V3G9 751 aa16.28■□□□□ 0.2
CNOT1-213ENST00000568158 ZBTB7BO15156 539 aaPredicted RBP16.28■□□□□ 0.2
CNOT1-213ENST00000568158 VEGFAP15692 232 aaPredicted RBP16.28■□□□□ 0.2
CNOT1-213ENST00000568158 DCAF8Q5TAQ9 597 aa16.28■□□□□ 0.2
CNOT1-213ENST00000568158 TXNRD3Q86VQ6 643 aa16.28■□□□□ 0.2
CNOT1-213ENST00000568158 ITPRIPQ8IWB1 547 aa16.28■□□□□ 0.2
CNOT1-213ENST00000568158 ZNF804BA4D1E1 1349 aa16.27■□□□□ 0.2
CNOT1-213ENST00000568158 ECE2O60344 883 aa16.27■□□□□ 0.2
CNOT1-213ENST00000568158 GNAI2P04899 355 aa16.27■□□□□ 0.2
CNOT1-213ENST00000568158 PTPN12Q05209 780 aaKnown RBP16.27■□□□□ 0.2
CNOT1-213ENST00000568158 KLRK1P26718 216 aa16.26■□□□□ 0.19
CNOT1-213ENST00000568158 CIAPIN1Q6FI81 312 aa16.26■□□□□ 0.19
CNOT1-213ENST00000568158 GPC2Q8N158 579 aa16.26■□□□□ 0.19
CNOT1-213ENST00000568158 KCNJ4P48050 445 aa16.25■□□□□ 0.19
CNOT1-213ENST00000568158 C20orf194Q5TEA3 1177 aa16.25■□□□□ 0.19
CNOT1-213ENST00000568158 C1orf115Q9H7X2 142 aa16.25■□□□□ 0.19
CNOT1-213ENST00000568158 PA2G4Q9UQ80 394 aaKnown RBP16.25■□□□□ 0.19
CNOT1-213ENST00000568158 MS4A1P11836 297 aa16.24■□□□□ 0.19
CNOT1-213ENST00000568158 TNIP1Q15025 636 aa16.24■□□□□ 0.19
CNOT1-213ENST00000568158 C16orf71Q8IYS4 520 aaPredicted RBP16.24■□□□□ 0.19
CNOT1-213ENST00000568158 L3MBTL3Q96JM7 780 aaPredicted RBP16.24■□□□□ 0.19
CNOT1-213ENST00000568158 SIL1Q9H173 461 aa16.24■□□□□ 0.19
CNOT1-213ENST00000568158 COG6Q9Y2V7 657 aa16.24■□□□□ 0.19
CNOT1-213ENST00000568158 WDR90Q96KV7 1748 aa16.23■□□□□ 0.19
CNOT1-213ENST00000568158 EYA2O00167 538 aa16.23■□□□□ 0.19
CNOT1-213ENST00000568158 PSMD14O00487 310 aa16.23■□□□□ 0.19
CNOT1-213ENST00000568158 SRGAP3O43295 1099 aa16.23■□□□□ 0.19
CNOT1-213ENST00000568158 EPS15P42566 896 aa16.23■□□□□ 0.19
CNOT1-213ENST00000568158 C1QTNF8P60827 252 aa16.23■□□□□ 0.19
CNOT1-213ENST00000568158 METTL24Q5JXM2 366 aa16.23■□□□□ 0.19
CNOT1-213ENST00000568158 ATG9AQ7Z3C6 839 aa16.23■□□□□ 0.19
CNOT1-213ENST00000568158 ZBTB12Q9Y330 459 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms