RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 BEGAINQ9BUH8 593 aa29.76■■■□□ 2.35
CNEP1R1-209ENST00000567712 RIC3Q7Z5B4 369 aa29.75■■■□□ 2.35
CNEP1R1-209ENST00000567712 PRKRIP1Q9H875 184 aaPredicted RBP29.75■■■□□ 2.35
CNEP1R1-209ENST00000567712 ZBTB38Q8NAP3 1195 aaPredicted RBP29.74■■■□□ 2.35
CNEP1R1-209ENST00000567712 RBM26Q5T8P6 1007 aaKnown RBP29.73■■■□□ 2.35
CNEP1R1-209ENST00000567712 C8orf58Q8NAV2 365 aa29.73■■■□□ 2.35
CNEP1R1-209ENST00000567712 MYD88Q99836 296 aa29.73■■■□□ 2.35
CNEP1R1-209ENST00000567712 IFT57Q9NWB7 429 aa29.72■■■□□ 2.35
CNEP1R1-209ENST00000567712 ADM5C9JUS6 153 aa29.71■■■□□ 2.35
CNEP1R1-209ENST00000567712 GOLGA2Q08379 1002 aa29.71■■■□□ 2.35
CNEP1R1-209ENST00000567712 CCDC85AQ96PX6 553 aaPredicted RBP29.71■■■□□ 2.35
CNEP1R1-209ENST00000567712 PSME4Q14997 1843 aa29.71■■■□□ 2.35
CNEP1R1-209ENST00000567712 EYA3Q99504 573 aa29.7■■■□□ 2.35
CNEP1R1-209ENST00000567712 PODXL2Q9NZ53 605 aa29.7■■■□□ 2.35
CNEP1R1-209ENST00000567712 ASTN2O75129 1339 aaPredicted RBP29.7■■■□□ 2.34
CNEP1R1-209ENST00000567712 BRPF1P55201 1214 aaPredicted RBP29.69■■■□□ 2.34
CNEP1R1-209ENST00000567712 HUNKP57058 714 aa29.69■■■□□ 2.34
CNEP1R1-209ENST00000567712 KRT26Q7Z3Y9 468 aa29.69■■■□□ 2.34
CNEP1R1-209ENST00000567712 VIL1P09327 827 aaKnown RBP29.68■■■□□ 2.34
CNEP1R1-209ENST00000567712 RPS12P25398 132 aaKnown RBP29.68■■■□□ 2.34
CNEP1R1-209ENST00000567712 UFL1O94874 794 aa29.67■■■□□ 2.34
CNEP1R1-209ENST00000567712 PCCAP05165 728 aaPredicted RBP29.67■■■□□ 2.34
CNEP1R1-209ENST00000567712 GNAI1P63096 354 aa29.67■■■□□ 2.34
CNEP1R1-209ENST00000567712 TSPYL6Q8N831 410 aa29.67■■■□□ 2.34
CNEP1R1-209ENST00000567712 CCDC191Q8NCU4 936 aa29.67■■■□□ 2.34
CNEP1R1-209ENST00000567712 SPEF2Q9C093 1822 aa29.66■■■□□ 2.34
CNEP1R1-209ENST00000567712 WTIPA6NIX2 430 aaPredicted RBP29.66■■■□□ 2.34
CNEP1R1-209ENST00000567712 FAM155AB1AL88 458 aaPredicted RBP29.66■■■□□ 2.34
CNEP1R1-209ENST00000567712 ZC3H12CQ9C0D7 883 aaKnown RBP29.66■■■□□ 2.34
CNEP1R1-209ENST00000567712 PDE8AO60658 829 aa29.65■■■□□ 2.34
CNEP1R1-209ENST00000567712 KIF4BQ2VIQ3 1234 aa29.65■■■□□ 2.34
CNEP1R1-209ENST00000567712 METTL22Q9BUU2 404 aaPredicted RBP29.65■■■□□ 2.34
CNEP1R1-209ENST00000567712 ANKIB1Q9P2G1 1089 aa29.65■■■□□ 2.34
CNEP1R1-209ENST00000567712 CCDC85CA6NKD9 419 aa29.64■■■□□ 2.34
CNEP1R1-209ENST00000567712 GBA2Q9HCG7 927 aaPredicted RBP29.64■■■□□ 2.34
CNEP1R1-209ENST00000567712 CWC25Q9NXE8 425 aaPredicted RBP29.64■■■□□ 2.34
CNEP1R1-209ENST00000567712 GGA1Q9UJY5 639 aa29.64■■■□□ 2.34
CNEP1R1-209ENST00000567712 MYH3P11055 1940 aa29.63■■■□□ 2.33
CNEP1R1-209ENST00000567712 FAM161AQ3B820 660 aa29.63■■■□□ 2.33
CNEP1R1-209ENST00000567712 CCDC152Q4G0S7 254 aa29.63■■■□□ 2.33
CNEP1R1-209ENST00000567712 DCPSQ96C86 337 aaKnown RBP29.63■■■□□ 2.33
CNEP1R1-209ENST00000567712 CA12O43570 354 aa29.62■■■□□ 2.33
CNEP1R1-209ENST00000567712 NOGQ13253 232 aa29.62■■■□□ 2.33
CNEP1R1-209ENST00000567712 GGA3Q9NZ52 723 aa29.62■■■□□ 2.33
CNEP1R1-209ENST00000567712 RGMBQ6NW40 437 aa29.61■■■□□ 2.33
CNEP1R1-209ENST00000567712 MCOLN1Q9GZU1 580 aa29.61■■■□□ 2.33
CNEP1R1-209ENST00000567712 MAP3K2Q9Y2U5 619 aa29.61■■■□□ 2.33
CNEP1R1-209ENST00000567712 ZNF646O15015 1829 aaPredicted RBP29.61■■■□□ 2.33
CNEP1R1-209ENST00000567712 IGKV5-2P06315 115 aa29.6■■■□□ 2.33
CNEP1R1-209ENST00000567712 ZNF280AP59817 542 aaPredicted RBP29.59■■■□□ 2.33
CNEP1R1-209ENST00000567712 CCDC184Q52MB2 194 aa29.59■■■□□ 2.33
CNEP1R1-209ENST00000567712 CALD1Q05682 793 aaKnown RBP29.58■■■□□ 2.33
CNEP1R1-209ENST00000567712 CCDC30Q5VVM6 783 aa29.58■■■□□ 2.33
CNEP1R1-209ENST00000567712 RSBN1LQ6PCB5 846 aaPredicted RBP29.58■■■□□ 2.33
CNEP1R1-209ENST00000567712 C2orf69Q8N8R5 385 aa29.58■■■□□ 2.33
CNEP1R1-209ENST00000567712 GMLQ99445 158 aa29.58■■■□□ 2.33
CNEP1R1-209ENST00000567712 AKAP11Q9UKA4 1901 aa29.58■■■□□ 2.33
CNEP1R1-209ENST00000567712 ZNF609O15014 1411 aa29.57■■■□□ 2.32
CNEP1R1-209ENST00000567712 G3V3G9 751 aa29.57■■■□□ 2.32
CNEP1R1-209ENST00000567712 DCAF8Q5TAQ9 597 aa29.57■■■□□ 2.32
CNEP1R1-209ENST00000567712 ANKRD18AQ8IVF6 992 aa29.57■■■□□ 2.32
CNEP1R1-209ENST00000567712 TSR2Q969E8 191 aaKnown RBP29.57■■■□□ 2.32
CNEP1R1-209ENST00000567712 XDHP47989 1333 aa29.56■■■□□ 2.32
CNEP1R1-209ENST00000567712 PI4KAP2A4QPH2 592 aa29.56■■■□□ 2.32
CNEP1R1-209ENST00000567712 HSP90B1P14625 803 aaKnown RBP29.56■■■□□ 2.32
CNEP1R1-209ENST00000567712 KIF23Q02241 960 aaPredicted RBP29.56■■■□□ 2.32
CNEP1R1-209ENST00000567712 SCARF1Q14162 830 aa29.56■■■□□ 2.32
CNEP1R1-209ENST00000567712 PI4KAP1Q8N8J0 262 aa29.56■■■□□ 2.32
CNEP1R1-209ENST00000567712 CDCA5Q96FF9 252 aa29.56■■■□□ 2.32
CNEP1R1-209ENST00000567712 SCAF8Q9UPN6 1271 aaKnown RBP29.56■■■□□ 2.32
CNEP1R1-209ENST00000567712 CTSWP56202 376 aa29.55■■■□□ 2.32
CNEP1R1-209ENST00000567712 ANGEL2Q5VTE6 544 aaKnown RBP29.55■■■□□ 2.32
CNEP1R1-209ENST00000567712 SULF1Q8IWU6 871 aa29.55■■■□□ 2.32
CNEP1R1-209ENST00000567712 AGBL3Q8NEM8 1001 aa29.55■■■□□ 2.32
CNEP1R1-209ENST00000567712 TTLL11Q8NHH1 800 aa29.55■■■□□ 2.32
CNEP1R1-209ENST00000567712 DDX58O95786 925 aaKnown RBP29.54■■■□□ 2.32
CNEP1R1-209ENST00000567712 RGS19P49795 217 aa29.54■■■□□ 2.32
CNEP1R1-209ENST00000567712 ZNF157P51786 506 aaPredicted RBP29.54■■■□□ 2.32
CNEP1R1-209ENST00000567712 CWF19L2Q2TBE0 894 aaKnown RBP29.54■■■□□ 2.32
CNEP1R1-209ENST00000567712 KSR2Q6VAB6 950 aa29.54■■■□□ 2.32
CNEP1R1-209ENST00000567712 G2E3Q7L622 706 aa29.54■■■□□ 2.32
CNEP1R1-209ENST00000567712 GREM2Q9H772 168 aa29.54■■■□□ 2.32
CNEP1R1-209ENST00000567712 DGKZQ13574 1117 aa29.53■■■□□ 2.32
CNEP1R1-209ENST00000567712 MXD3Q9BW11 206 aa29.53■■■□□ 2.32
CNEP1R1-209ENST00000567712 ATP2B4P23634 1241 aa29.52■■■□□ 2.32
CNEP1R1-209ENST00000567712 CCDC102AQ96A19 550 aa29.52■■■□□ 2.32
CNEP1R1-209ENST00000567712 MINPP1Q9UNW1 487 aa29.52■■■□□ 2.32
CNEP1R1-209ENST00000567712 SLC10A3P09131 477 aa29.51■■■□□ 2.31
CNEP1R1-209ENST00000567712 MYOZ2Q9NPC6 264 aa29.51■■■□□ 2.31
CNEP1R1-209ENST00000567712 USP17L3A6NCW0 530 aa29.5■■■□□ 2.31
CNEP1R1-209ENST00000567712 USP17L4A6NCW7 530 aa29.5■■■□□ 2.31
CNEP1R1-209ENST00000567712 USP17L8P0C7I0 530 aa29.5■■■□□ 2.31
CNEP1R1-209ENST00000567712 USP17L1Q7RTZ2 530 aa29.5■■■□□ 2.31
CNEP1R1-209ENST00000567712 RNF186Q9NXI6 227 aa29.5■■■□□ 2.31
CNEP1R1-209ENST00000567712 NEURL1BA8MQ27 555 aa29.49■■■□□ 2.31
CNEP1R1-209ENST00000567712 PODNQ7Z5L7 613 aa29.49■■■□□ 2.31
CNEP1R1-209ENST00000567712 CSRNP1Q96S65 589 aa29.49■■■□□ 2.31
CNEP1R1-209ENST00000567712 CDC5LQ99459 802 aaKnown RBP29.49■■■□□ 2.31
CNEP1R1-209ENST00000567712 BSDC1Q9NW68 430 aaPredicted RBP29.49■■■□□ 2.31
CNEP1R1-209ENST00000567712 MOB2Q70IA6 237 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms