RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 DPP8Q6V1X1 898 aaPredicted RBP15.2■□□□□ 0.02
SF3B3-208ENST00000567250 MPNDQ8N594 471 aa15.2■□□□□ 0.02
SF3B3-208ENST00000567250 COG6Q9Y2V7 657 aa15.2■□□□□ 0.02
SF3B3-208ENST00000567250 NFKBIEO00221 500 aa15.19■□□□□ 0.02
SF3B3-208ENST00000567250 ZBTB7BO15156 539 aaPredicted RBP15.19■□□□□ 0.02
SF3B3-208ENST00000567250 LMNB1P20700 586 aa15.19■□□□□ 0.02
SF3B3-208ENST00000567250 RASSF7Q02833 373 aa15.19■□□□□ 0.02
SF3B3-208ENST00000567250 UTRNP46939 3433 aa15.19■□□□□ 0.02
SF3B3-208ENST00000567250 XDHP47989 1333 aa15.18■□□□□ 0.02
SF3B3-208ENST00000567250 MTX1Q13505 466 aa15.18■□□□□ 0.02
SF3B3-208ENST00000567250 LDHAL6AQ6ZMR3 332 aa15.18■□□□□ 0.02
SF3B3-208ENST00000567250 ANKRD2Q9GZV1 360 aa15.18■□□□□ 0.02
SF3B3-208ENST00000567250 CNNM1Q9NRU3 951 aa15.18■□□□□ 0.02
SF3B3-208ENST00000567250 ANKIB1Q9P2G1 1089 aa15.18■□□□□ 0.02
SF3B3-208ENST00000567250 NSFL1CQ9UNZ2 370 aaKnown RBP15.18■□□□□ 0.02
SF3B3-208ENST00000567250 ZC3H4Q9UPT8 1303 aaKnown RBP15.17■□□□□ 0.02
SF3B3-208ENST00000567250 C20orf194Q5TEA3 1177 aa15.17■□□□□ 0.02
SF3B3-208ENST00000567250 OLFM4Q6UX06 510 aa15.17■□□□□ 0.02
SF3B3-208ENST00000567250 EYA3Q99504 573 aa15.17■□□□□ 0.02
SF3B3-208ENST00000567250 RTFDC1Q9BY42 306 aaPredicted RBP15.17■□□□□ 0.02
SF3B3-208ENST00000567250 VPS33BQ9H267 617 aa15.17■□□□□ 0.02
SF3B3-208ENST00000567250 PODXL2Q9NZ53 605 aa15.17■□□□□ 0.02
SF3B3-208ENST00000567250 FBXO3Q9UK99 471 aa15.17■□□□□ 0.02
SF3B3-208ENST00000567250 SRGAP3O43295 1099 aa15.16■□□□□ 0.02
SF3B3-208ENST00000567250 RNF181Q9P0P0 153 aa15.16■□□□□ 0.02
SF3B3-208ENST00000567250 GGA1Q9UJY5 639 aa15.16■□□□□ 0.02
SF3B3-208ENST00000567250 MROH5Q6ZUA9 1318 aa15.16■□□□□ 0.02
SF3B3-208ENST00000567250 IARSP41252 1262 aaKnown RBP15.15■□□□□ 0.02
SF3B3-208ENST00000567250 GPSM2P81274 684 aa15.15■□□□□ 0.02
SF3B3-208ENST00000567250 C9orf131Q5VYM1 1079 aa15.15■□□□□ 0.02
SF3B3-208ENST00000567250 ZNF594Q96JF6 807 aaPredicted RBP15.15■□□□□ 0.02
SF3B3-208ENST00000567250 MINPP1Q9UNW1 487 aa15.15■□□□□ 0.02
SF3B3-208ENST00000567250 ARAP2Q8WZ64 1704 aa15.14■□□□□ 0.01
SF3B3-208ENST00000567250 C6orf229H3BNL8 230 aa15.14■□□□□ 0.01
SF3B3-208ENST00000567250 PPIP5K2O43314 1243 aa15.14■□□□□ 0.01
SF3B3-208ENST00000567250 UFL1O94874 794 aa15.14■□□□□ 0.01
SF3B3-208ENST00000567250 ATP2B4P23634 1241 aa15.14■□□□□ 0.01
SF3B3-208ENST00000567250 KCNJ4P48050 445 aa15.14■□□□□ 0.01
SF3B3-208ENST00000567250 CHRNDQ07001 517 aa15.14■□□□□ 0.01
SF3B3-208ENST00000567250 JDP2Q8WYK2 163 aa15.14■□□□□ 0.01
SF3B3-208ENST00000567250 C1orf115Q9H7X2 142 aa15.14■□□□□ 0.01
SF3B3-208ENST00000567250 ZNF277Q9NRM2 450 aaPredicted RBP15.14■□□□□ 0.01
SF3B3-208ENST00000567250 ZBTB40Q9NUA8 1239 aa15.14■□□□□ 0.01
SF3B3-208ENST00000567250 PSME4Q14997 1843 aa15.14■□□□□ 0.01
SF3B3-208ENST00000567250 MED23Q9ULK4 1368 aa15.13■□□□□ 0.01
SF3B3-208ENST00000567250 HMMRO75330 724 aa15.13■□□□□ 0.01
SF3B3-208ENST00000567250 CENPBP07199 599 aaPredicted RBP15.13■□□□□ 0.01
SF3B3-208ENST00000567250 RFX5P48382 616 aaPredicted RBP15.13■□□□□ 0.01
SF3B3-208ENST00000567250 PTPN12Q05209 780 aaKnown RBP15.13■□□□□ 0.01
SF3B3-208ENST00000567250 LARGE2Q8N3Y3 721 aa15.13■□□□□ 0.01
SF3B3-208ENST00000567250 TBC1D16Q8TBP0 767 aa15.13■□□□□ 0.01
SF3B3-208ENST00000567250 COPRSQ9NQ92 184 aa15.13■□□□□ 0.01
SF3B3-208ENST00000567250 LEMD3Q9Y2U8 911 aa15.13■□□□□ 0.01
SF3B3-208ENST00000567250 SUPT16HQ9Y5B9 1047 aaKnown RBP15.13■□□□□ 0.01
SF3B3-208ENST00000567250 MYH13Q9UKX3 1938 aa15.12■□□□□ 0.01
SF3B3-208ENST00000567250 EYA2O00167 538 aa15.12■□□□□ 0.01
SF3B3-208ENST00000567250 CIAO1O76071 339 aa15.12■□□□□ 0.01
SF3B3-208ENST00000567250 KIAA2012Q0VF49 1180 aa15.12■□□□□ 0.01
SF3B3-208ENST00000567250 AAMPQ13685 434 aa15.12■□□□□ 0.01
SF3B3-208ENST00000567250 WASHC4Q2M389 1173 aa15.12■□□□□ 0.01
SF3B3-208ENST00000567250 CEP85Q6P2H3 762 aa15.12■□□□□ 0.01
SF3B3-208ENST00000567250 SLC51AQ86UW1 340 aa15.12■□□□□ 0.01
SF3B3-208ENST00000567250 RPAP2Q8IXW5 612 aaPredicted RBP15.12■□□□□ 0.01
SF3B3-208ENST00000567250 NIM1KQ8IY84 436 aa15.12■□□□□ 0.01
SF3B3-208ENST00000567250 MYCNP04198 464 aaPredicted RBP15.11■□□□□ 0.01
SF3B3-208ENST00000567250 AOC3Q16853 763 aa15.11■□□□□ 0.01
SF3B3-208ENST00000567250 METTL24Q5JXM2 366 aa15.11■□□□□ 0.01
SF3B3-208ENST00000567250 ZC3H12CQ9C0D7 883 aaKnown RBP15.11■□□□□ 0.01
SF3B3-208ENST00000567250 SIL1Q9H173 461 aa15.11■□□□□ 0.01
SF3B3-208ENST00000567250 ZNF804BA4D1E1 1349 aa15.11■□□□□ 0.01
SF3B3-208ENST00000567250 PNMA6EA0A0J9YXQ4 647 aa15.1■□□□□ 0.01
SF3B3-208ENST00000567250 YY1P25490 414 aa15.1■□□□□ 0.01
SF3B3-208ENST00000567250 IL15P40933 162 aaPredicted RBP15.1■□□□□ 0.01
SF3B3-208ENST00000567250 ATP8B2P98198 1209 aa15.1■□□□□ 0.01
SF3B3-208ENST00000567250 POLA2Q14181 598 aa15.1■□□□□ 0.01
SF3B3-208ENST00000567250 KLHDC4Q8TBB5 520 aa15.1■□□□□ 0.01
SF3B3-208ENST00000567250 SSH3Q8TE77 659 aa15.1■□□□□ 0.01
SF3B3-208ENST00000567250 POLLQ9UGP5 575 aa15.1■□□□□ 0.01
SF3B3-208ENST00000567250 RIPOR2Q9Y4F9 1068 aa15.1■□□□□ 0.01
SF3B3-208ENST00000567250 COL4A5P29400 1685 aa15.09■□□□□ 0.01
SF3B3-208ENST00000567250 G3V3G9 751 aa15.09■□□□□ 0.01
SF3B3-208ENST00000567250 PRELPP51888 382 aa15.09■□□□□ 0.01
SF3B3-208ENST00000567250 UBE4AQ14139 1066 aa15.09■□□□□ 0.01
SF3B3-208ENST00000567250 LRRC24Q50LG9 513 aa15.09■□□□□ 0.01
SF3B3-208ENST00000567250 DCAF8Q5TAQ9 597 aa15.09■□□□□ 0.01
SF3B3-208ENST00000567250 CRBNQ96SW2 442 aa15.09■□□□□ 0.01
SF3B3-208ENST00000567250 PUS3Q9BZE2 481 aaKnown RBP15.09■□□□□ 0.01
SF3B3-208ENST00000567250 TAF5LO75529 589 aa15.08■□□□□ 0
SF3B3-208ENST00000567250 PDE8BO95263 885 aa15.08■□□□□ 0
SF3B3-208ENST00000567250 EIF6P56537 245 aaKnown RBP15.08■□□□□ 0
SF3B3-208ENST00000567250 G3BP1Q13283 466 aaKnown RBP eCLIP15.08■□□□□ 03e-8■■■□□ 15.3
SF3B3-208ENST00000567250 OS9Q13438 667 aaPredicted RBP15.08■□□□□ 0
SF3B3-208ENST00000567250 PUM3Q15397 648 aaKnown RBP15.08■□□□□ 0
SF3B3-208ENST00000567250 PA2G4Q9UQ80 394 aaKnown RBP15.08■□□□□ 0
SF3B3-208ENST00000567250 WDR90Q96KV7 1748 aa15.07■□□□□ 0
SF3B3-208ENST00000567250 RIMBP2O15034 1052 aa15.07■□□□□ 0
SF3B3-208ENST00000567250 HSP90AB4PQ58FF6 505 aa15.07■□□□□ 0
SF3B3-208ENST00000567250 DPY19L2Q6NUT2 758 aa15.07■□□□□ 0
SF3B3-208ENST00000567250 ATG9AQ7Z3C6 839 aa15.07■□□□□ 0
SF3B3-208ENST00000567250 HELBQ8NG08 1087 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms