RNA–Protein interactions for RNA: ENST00000566828.5

EDC3-212, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-212ENST00000566828 SF3B3Q15393 1217 aaKnown RBP21.1■□□□□ 0.97
EDC3-212ENST00000566828 NEUROD2Q15784 382 aa21.1■□□□□ 0.97
EDC3-212ENST00000566828 HDGFL1Q5TGJ6 251 aa21.1■□□□□ 0.97
EDC3-212ENST00000566828 EYA3Q99504 573 aa21.1■□□□□ 0.97
EDC3-212ENST00000566828 ISCA1Q9BUE6 129 aa21.1■□□□□ 0.97
EDC3-212ENST00000566828 SAGE1Q9NXZ1 904 aa21.1■□□□□ 0.97
EDC3-212ENST00000566828 LAS1LQ9Y4W2 734 aaKnown RBP21.1■□□□□ 0.97
EDC3-212ENST00000566828 ASTN2O75129 1339 aaPredicted RBP21.09■□□□□ 0.97
EDC3-212ENST00000566828 SOX10P56693 466 aa21.09■□□□□ 0.97
EDC3-212ENST00000566828 CCDC146Q8IYE0 955 aa21.09■□□□□ 0.97
EDC3-212ENST00000566828 ZNF646O15015 1829 aaPredicted RBP21.08■□□□□ 0.97
EDC3-212ENST00000566828 SLC10A3P09131 477 aa21.08■□□□□ 0.97
EDC3-212ENST00000566828 TBC1D16Q8TBP0 767 aa21.08■□□□□ 0.97
EDC3-212ENST00000566828 CCDC102AQ96A19 550 aa21.08■□□□□ 0.97
EDC3-212ENST00000566828 CHL1O00533 1208 aa21.07■□□□□ 0.96
EDC3-212ENST00000566828 TRPA1O75762 1119 aa21.07■□□□□ 0.96
EDC3-212ENST00000566828 ANKRD13DQ6ZTN6 518 aa21.07■□□□□ 0.96
EDC3-212ENST00000566828 SULF1Q8IWU6 871 aa21.07■□□□□ 0.96
EDC3-212ENST00000566828 CDCA5Q96FF9 252 aa21.07■□□□□ 0.96
EDC3-212ENST00000566828 RNF186Q9NXI6 227 aa21.07■□□□□ 0.96
EDC3-212ENST00000566828 IRS4O14654 1257 aaPredicted RBP21.06■□□□□ 0.96
EDC3-212ENST00000566828 PDE4DIPQ5VU43 2346 aa21.05■□□□□ 0.96
EDC3-212ENST00000566828 UFL1O94874 794 aa21.05■□□□□ 0.96
EDC3-212ENST00000566828 DBF4Q9UBU7 674 aaPredicted RBP21.05■□□□□ 0.96
EDC3-212ENST00000566828 ZNF609O15014 1411 aa21.04■□□□□ 0.96
EDC3-212ENST00000566828 MYH3P11055 1940 aa21.04■□□□□ 0.96
EDC3-212ENST00000566828 SEC31BQ9NQW1 1179 aa21.04■□□□□ 0.96
EDC3-212ENST00000566828 VIL1P09327 827 aaKnown RBP21.03■□□□□ 0.96
EDC3-212ENST00000566828 HOXB7P09629 217 aa21.03■□□□□ 0.96
EDC3-212ENST00000566828 RPS8P62241 208 aaKnown RBP21.03■□□□□ 0.96
EDC3-212ENST00000566828 RASAL3Q86YV0 1011 aa21.03■□□□□ 0.96
EDC3-212ENST00000566828 ZC3H12CQ9C0D7 883 aaKnown RBP21.03■□□□□ 0.96
EDC3-212ENST00000566828 TRIM35Q9UPQ4 493 aa21.03■□□□□ 0.96
EDC3-212ENST00000566828 G3V3G9 751 aa21.02■□□□□ 0.96
EDC3-212ENST00000566828 DCAF8Q5TAQ9 597 aa21.02■□□□□ 0.96
EDC3-212ENST00000566828 ANGEL2Q5VTE6 544 aaKnown RBP21.02■□□□□ 0.96
EDC3-212ENST00000566828 CSRNP1Q96S65 589 aa21.02■□□□□ 0.96
EDC3-212ENST00000566828 ANKIB1Q9P2G1 1089 aa21.02■□□□□ 0.96
EDC3-212ENST00000566828 HYPKQ9NX55 129 aa21.01■□□□□ 0.95
EDC3-212ENST00000566828 PODXL2Q9NZ53 605 aa21.01■□□□□ 0.95
EDC3-212ENST00000566828 GGA1Q9UJY5 639 aa21.01■□□□□ 0.95
EDC3-212ENST00000566828 ZNF280AP59817 542 aaPredicted RBP20.99■□□□□ 0.95
EDC3-212ENST00000566828 SCARF1Q14162 830 aa20.99■□□□□ 0.95
EDC3-212ENST00000566828 DUSP27Q5VZP5 1158 aa20.99■□□□□ 0.95
EDC3-212ENST00000566828 RSBN1LQ6PCB5 846 aaPredicted RBP20.99■□□□□ 0.95
EDC3-212ENST00000566828 CTU1Q7Z7A3 348 aaKnown RBP20.99■□□□□ 0.95
EDC3-212ENST00000566828 ZBTB38Q8NAP3 1195 aaPredicted RBP20.99■□□□□ 0.95
EDC3-212ENST00000566828 CCDC85AQ96PX6 553 aaPredicted RBP20.99■□□□□ 0.95
EDC3-212ENST00000566828 SCAF8Q9UPN6 1271 aaKnown RBP20.99■□□□□ 0.95
EDC3-212ENST00000566828 GOLGA2Q08379 1002 aa20.98■□□□□ 0.95
EDC3-212ENST00000566828 TRIM28Q13263 835 aaKnown RBP20.98■□□□□ 0.95
EDC3-212ENST00000566828 RALBP1Q15311 655 aa20.98■□□□□ 0.95
EDC3-212ENST00000566828 RIC3Q7Z5B4 369 aa20.98■□□□□ 0.95
EDC3-212ENST00000566828 AGBL3Q8NEM8 1001 aa20.98■□□□□ 0.95
EDC3-212ENST00000566828 MOB2Q70IA6 237 aa20.97■□□□□ 0.95
EDC3-212ENST00000566828 RUNDC1Q96C34 613 aa20.97■□□□□ 0.95
EDC3-212ENST00000566828 MYD88Q99836 296 aa20.97■□□□□ 0.95
EDC3-212ENST00000566828 PCDH10Q9P2E7 1040 aa20.97■□□□□ 0.95
EDC3-212ENST00000566828 CCDC152Q4G0S7 254 aa20.96■□□□□ 0.95
EDC3-212ENST00000566828 JARID2Q92833 1246 aaPredicted RBP20.96■□□□□ 0.95
EDC3-212ENST00000566828 PHAXQ9H814 394 aaKnown RBP20.96■□□□□ 0.95
EDC3-212ENST00000566828 MYOZ2Q9NPC6 264 aa20.96■□□□□ 0.95
EDC3-212ENST00000566828 MBIPQ9NS73 344 aa20.96■□□□□ 0.95
EDC3-212ENST00000566828 MYBBP1AQ9BQG0 1328 aaKnown RBP20.96■□□□□ 0.95
EDC3-212ENST00000566828 XDHP47989 1333 aa20.95■□□□□ 0.94
EDC3-212ENST00000566828 PITPNM2Q9BZ72 1349 aa20.95■□□□□ 0.94
EDC3-212ENST00000566828 USP17L8P0C7I0 530 aa20.94■□□□□ 0.94
EDC3-212ENST00000566828 FKBP1BP68106 108 aa20.94■□□□□ 0.94
EDC3-212ENST00000566828 WDR43Q15061 677 aaKnown RBP eCLIP20.94■□□□□ 0.94
EDC3-212ENST00000566828 REM2Q8IYK8 340 aaPredicted RBP20.94■□□□□ 0.94
EDC3-212ENST00000566828 GMLQ99445 158 aa20.94■□□□□ 0.94
EDC3-212ENST00000566828 HPS5Q9UPZ3 1129 aa20.94■□□□□ 0.94
EDC3-212ENST00000566828 PDE8AO60658 829 aa20.93■□□□□ 0.94
EDC3-212ENST00000566828 PCCAP05165 728 aaPredicted RBP20.93■□□□□ 0.94
EDC3-212ENST00000566828 HSP90B1P14625 803 aaKnown RBP20.93■□□□□ 0.94
EDC3-212ENST00000566828 PRAMEF18Q5VWM3 479 aa20.93■□□□□ 0.94
EDC3-212ENST00000566828 UBE2Q2LH0YL09 131 aa20.92■□□□□ 0.94
EDC3-212ENST00000566828 ANKRD18AQ8IVF6 992 aa20.92■□□□□ 0.94
EDC3-212ENST00000566828 USP17L3A6NCW0 530 aa20.91■□□□□ 0.94
EDC3-212ENST00000566828 USP17L4A6NCW7 530 aa20.91■□□□□ 0.94
EDC3-212ENST00000566828 TBC1D8O95759 1140 aa20.91■□□□□ 0.94
EDC3-212ENST00000566828 PRPF38BQ5VTL8 546 aaKnown RBP20.91■□□□□ 0.94
EDC3-212ENST00000566828 ECM29Q5VYK3 1845 aa20.91■□□□□ 0.94
EDC3-212ENST00000566828 USP17L1Q7RTZ2 530 aa20.91■□□□□ 0.94
EDC3-212ENST00000566828 CCDC191Q8NCU4 936 aa20.91■□□□□ 0.94
EDC3-212ENST00000566828 ZNF296Q8WUU4 475 aaPredicted RBP20.91■□□□□ 0.94
EDC3-212ENST00000566828 CWC25Q9NXE8 425 aaPredicted RBP20.91■□□□□ 0.94
EDC3-212ENST00000566828 HDAC9Q9UKV0 1011 aa20.91■□□□□ 0.94
EDC3-212ENST00000566828 MED23Q9ULK4 1368 aa20.91■□□□□ 0.94
EDC3-212ENST00000566828 A0A1B0GUL6 1792 aa20.9■□□□□ 0.94
EDC3-212ENST00000566828 LAMB1P07942 1786 aa20.9■□□□□ 0.94
EDC3-212ENST00000566828 WTIPA6NIX2 430 aaPredicted RBP20.9■□□□□ 0.94
EDC3-212ENST00000566828 ELL2O00472 640 aaPredicted RBP20.9■□□□□ 0.94
EDC3-212ENST00000566828 ATP2B4P23634 1241 aa20.9■□□□□ 0.94
EDC3-212ENST00000566828 MKRN3Q13064 507 aaKnown RBP20.9■□□□□ 0.94
EDC3-212ENST00000566828 TTLL12Q14166 644 aaPredicted RBP20.9■□□□□ 0.94
EDC3-212ENST00000566828 NBPF9Q3BBW0 867 aa20.9■□□□□ 0.94
EDC3-212ENST00000566828 FBXW7Q969H0 707 aa20.9■□□□□ 0.94
EDC3-212ENST00000566828 MXD3Q9BW11 206 aa20.9■□□□□ 0.94
EDC3-212ENST00000566828 PODNQ7Z5L7 613 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms