RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 CLEC11AQ9Y240 323 aa24.44■■□□□ 1.5
CCDC113-204ENST00000566498 LRRC37AA6NMS7 1700 aa24.44■■□□□ 1.5
CCDC113-204ENST00000566498 RTL9Q8NET4 1388 aa24.43■■□□□ 1.5
CCDC113-204ENST00000566498 RAD17O75943 681 aa24.43■■□□□ 1.5
CCDC113-204ENST00000566498 EPHX2P34913 555 aa24.43■■□□□ 1.5
CCDC113-204ENST00000566498 APLP1P51693 650 aa24.43■■□□□ 1.5
CCDC113-204ENST00000566498 FOXO4P98177 505 aa24.43■■□□□ 1.5
CCDC113-204ENST00000566498 DOK7Q18PE1 504 aa24.43■■□□□ 1.5
CCDC113-204ENST00000566498 FAM161AQ3B820 660 aa24.43■■□□□ 1.5
CCDC113-204ENST00000566498 MPHOSPH8Q99549 860 aa24.43■■□□□ 1.5
CCDC113-204ENST00000566498 SCN4AP35499 1836 aa24.42■■□□□ 1.5
CCDC113-204ENST00000566498 ANKRD18BA2A2Z9 1011 aa24.42■■□□□ 1.5
CCDC113-204ENST00000566498 TNIP1Q15025 636 aa24.42■■□□□ 1.5
CCDC113-204ENST00000566498 CIAPIN1Q6FI81 312 aa24.42■■□□□ 1.5
CCDC113-204ENST00000566498 DBNDD1Q9H9R9 158 aa24.42■■□□□ 1.5
CCDC113-204ENST00000566498 MINPP1Q9UNW1 487 aa24.42■■□□□ 1.5
CCDC113-204ENST00000566498 XDHP47989 1333 aa24.41■■□□□ 1.5
CCDC113-204ENST00000566498 POTEIP0CG38 1075 aa24.41■■□□□ 1.5
CCDC113-204ENST00000566498 POTEJP0CG39 1038 aa24.41■■□□□ 1.5
CCDC113-204ENST00000566498 IFIT5Q13325 482 aaKnown RBP24.41■■□□□ 1.5
CCDC113-204ENST00000566498 CHADLQ6NUI6 762 aa24.41■■□□□ 1.5
CCDC113-204ENST00000566498 PNMA8AQ86V59 439 aaPredicted RBP24.41■■□□□ 1.5
CCDC113-204ENST00000566498 ATP2B4P23634 1241 aa24.4■■□□□ 1.5
CCDC113-204ENST00000566498 LMBR1LQ6UX01 489 aa24.4■■□□□ 1.5
CCDC113-204ENST00000566498 DUOX1Q9NRD9 1551 aa24.39■■□□□ 1.5
CCDC113-204ENST00000566498 YDJCA8MPS7 323 aa24.39■■□□□ 1.49
CCDC113-204ENST00000566498 LDHDQ86WU2 507 aa24.39■■□□□ 1.49
CCDC113-204ENST00000566498 NOB1Q9ULX3 412 aaKnown RBP24.39■■□□□ 1.49
CCDC113-204ENST00000566498 ECE2O60344 883 aa24.38■■□□□ 1.49
CCDC113-204ENST00000566498 EPS15P42566 896 aa24.38■■□□□ 1.49
CCDC113-204ENST00000566498 SCNN1DP51172 638 aa24.38■■□□□ 1.49
CCDC113-204ENST00000566498 CCDC57Q2TAC2 916 aa24.38■■□□□ 1.49
CCDC113-204ENST00000566498 EPHA10Q5JZY3 1008 aa24.38■■□□□ 1.49
CCDC113-204ENST00000566498 NBPF7P0C2Y1 421 aaPredicted RBP24.37■■□□□ 1.49
CCDC113-204ENST00000566498 GMPSP49915 693 aaPredicted RBP24.37■■□□□ 1.49
CCDC113-204ENST00000566498 TAF7LQ5H9L4 462 aa24.37■■□□□ 1.49
CCDC113-204ENST00000566498 SPEF2Q9C093 1822 aa24.36■■□□□ 1.49
CCDC113-204ENST00000566498 RARSP54136 660 aaKnown RBP24.36■■□□□ 1.49
CCDC113-204ENST00000566498 ANKRD2Q9GZV1 360 aa24.36■■□□□ 1.49
CCDC113-204ENST00000566498 KCNQ5Q9NR82 932 aa24.36■■□□□ 1.49
CCDC113-204ENST00000566498 WTIPA6NIX2 430 aaPredicted RBP24.35■■□□□ 1.49
CCDC113-204ENST00000566498 CCT4P50991 539 aaKnown RBP24.35■■□□□ 1.49
CCDC113-204ENST00000566498 SUCLG2Q96I99 432 aa24.35■■□□□ 1.49
CCDC113-204ENST00000566498 GPRC5DQ9NZD1 345 aa24.35■■□□□ 1.49
CCDC113-204ENST00000566498 PSMD14O00487 310 aa24.34■■□□□ 1.49
CCDC113-204ENST00000566498 LTBP1Q14766 1721 aa24.33■■□□□ 1.49
CCDC113-204ENST00000566498 KCNJ4P48050 445 aa24.33■■□□□ 1.49
CCDC113-204ENST00000566498 HTRA3P83110 453 aa24.33■■□□□ 1.49
CCDC113-204ENST00000566498 ZNF594Q96JF6 807 aaPredicted RBP24.33■■□□□ 1.49
CCDC113-204ENST00000566498 API5Q9BZZ5 524 aaKnown RBP24.33■■□□□ 1.49
CCDC113-204ENST00000566498 LEMD3Q9Y2U8 911 aa24.33■■□□□ 1.49
CCDC113-204ENST00000566498 ZBTB12Q9Y330 459 aaPredicted RBP24.33■■□□□ 1.49
CCDC113-204ENST00000566498 UTYO14607 1347 aa24.33■■□□□ 1.48
CCDC113-204ENST00000566498 BRPF1P55201 1214 aaPredicted RBP24.32■■□□□ 1.48
CCDC113-204ENST00000566498 CHRNDQ07001 517 aa24.32■■□□□ 1.48
CCDC113-204ENST00000566498 LDHAL6AQ6ZMR3 332 aa24.32■■□□□ 1.48
CCDC113-204ENST00000566498 USP50Q70EL3 339 aaPredicted RBP24.32■■□□□ 1.48
CCDC113-204ENST00000566498 USP44Q9H0E7 712 aa24.32■■□□□ 1.48
CCDC113-204ENST00000566498 ADARB2Q9NS39 739 aaKnown RBP24.32■■□□□ 1.48
CCDC113-204ENST00000566498 CNOT7Q9UIV1 285 aaKnown RBP24.32■■□□□ 1.48
CCDC113-204ENST00000566498 H7C1D1 291 aa24.31■■□□□ 1.48
CCDC113-204ENST00000566498 MAP1SQ66K74 1059 aaPredicted RBP24.31■■□□□ 1.48
CCDC113-204ENST00000566498 HELBQ8NG08 1087 aaPredicted RBP24.31■■□□□ 1.48
CCDC113-204ENST00000566498 KAZALD1Q96I82 304 aa24.31■■□□□ 1.48
CCDC113-204ENST00000566498 BICC1Q9H694 974 aaKnown RBP24.31■■□□□ 1.48
CCDC113-204ENST00000566498 CNNM1Q9NRU3 951 aa24.31■■□□□ 1.48
CCDC113-204ENST00000566498 CEP350Q5VT06 3117 aa24.31■■□□□ 1.48
CCDC113-204ENST00000566498 CNTROBQ8N137 903 aa24.3■■□□□ 1.48
CCDC113-204ENST00000566498 ZNF804BA4D1E1 1349 aa24.3■■□□□ 1.48
CCDC113-204ENST00000566498 PLIN1O60240 522 aa24.29■■□□□ 1.48
CCDC113-204ENST00000566498 TAF5LO75529 589 aa24.29■■□□□ 1.48
CCDC113-204ENST00000566498 IPO8O15397 1037 aaKnown RBP24.28■■□□□ 1.48
CCDC113-204ENST00000566498 PODNQ7Z5L7 613 aa24.28■■□□□ 1.48
CCDC113-204ENST00000566498 DPF2Q92785 391 aa24.28■■□□□ 1.48
CCDC113-204ENST00000566498 FRAT1Q92837 279 aaPredicted RBP24.28■■□□□ 1.48
CCDC113-204ENST00000566498 KIF16BQ96L93 1317 aa24.28■■□□□ 1.48
CCDC113-204ENST00000566498 BCAR3O75815 825 aa24.27■■□□□ 1.48
CCDC113-204ENST00000566498 VIL1P09327 827 aaKnown RBP24.27■■□□□ 1.48
CCDC113-204ENST00000566498 MICALL2Q8IY33 904 aa24.27■■□□□ 1.48
CCDC113-204ENST00000566498 ARHGAP45Q92619 1136 aa24.27■■□□□ 1.48
CCDC113-204ENST00000566498 MED23Q9ULK4 1368 aa24.27■■□□□ 1.48
CCDC113-204ENST00000566498 ITGBL1O95965 494 aaPredicted RBP24.26■■□□□ 1.47
CCDC113-204ENST00000566498 RPS12P25398 132 aaKnown RBP24.26■■□□□ 1.47
CCDC113-204ENST00000566498 TXNRD3Q86VQ6 643 aa24.26■■□□□ 1.47
CCDC113-204ENST00000566498 DNAJC5GQ8N7S2 189 aa24.26■■□□□ 1.47
CCDC113-204ENST00000566498 SHTN1A0MZ66 631 aa24.25■■□□□ 1.47
CCDC113-204ENST00000566498 RBM26Q5T8P6 1007 aaKnown RBP24.25■■□□□ 1.47
CCDC113-204ENST00000566498 FBXW7Q969H0 707 aa24.25■■□□□ 1.47
CCDC113-204ENST00000566498 COA1Q9GZY4 146 aa24.25■■□□□ 1.47
CCDC113-204ENST00000566498 USP17L3A6NCW0 530 aa24.24■■□□□ 1.47
CCDC113-204ENST00000566498 USP17L4A6NCW7 530 aa24.24■■□□□ 1.47
CCDC113-204ENST00000566498 SNAP23O00161 211 aa24.24■■□□□ 1.47
CCDC113-204ENST00000566498 UBTFL1P0CB47 393 aaPredicted RBP24.24■■□□□ 1.47
CCDC113-204ENST00000566498 RABL6Q3YEC7 729 aaPredicted RBP24.24■■□□□ 1.47
CCDC113-204ENST00000566498 USP17L1Q7RTZ2 530 aa24.24■■□□□ 1.47
CCDC113-204ENST00000566498 ANKRD44Q8N8A2 993 aa24.24■■□□□ 1.47
CCDC113-204ENST00000566498 ZBED9Q6R2W3 1325 aa24.24■■□□□ 1.47
CCDC113-204ENST00000566498 KLRK1P26718 216 aa24.23■■□□□ 1.47
CCDC113-204ENST00000566498 RSBN1LQ6PCB5 846 aaPredicted RBP24.23■■□□□ 1.47
CCDC113-204ENST00000566498 SAMD7Q7Z3H4 446 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms