RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 TAF5LO75529 589 aa13.75□□□□□ -0.21
LINC00562-201ENST00000566385 RFC4P35249 363 aa13.75□□□□□ -0.21
LINC00562-201ENST00000566385 PI16Q6UXB8 463 aa13.75□□□□□ -0.21
LINC00562-201ENST00000566385 SETDB2Q96T68 719 aa13.75□□□□□ -0.21
LINC00562-201ENST00000566385 GOLIM4O00461 696 aa13.75□□□□□ -0.21
LINC00562-201ENST00000566385 EIF5BO60841 1220 aaKnown RBP13.75□□□□□ -0.21
LINC00562-201ENST00000566385 PDE8BO95263 885 aa13.75□□□□□ -0.21
LINC00562-201ENST00000566385 SNX21Q969T3 373 aa13.75□□□□□ -0.21
LINC00562-201ENST00000566385 SEC62Q99442 399 aaKnown RBP13.75□□□□□ -0.21
LINC00562-201ENST00000566385 SNRKQ9NRH2 765 aa13.75□□□□□ -0.21
LINC00562-201ENST00000566385 LAMB2P55268 1798 aa13.75□□□□□ -0.21
LINC00562-201ENST00000566385 UBR3Q6ZT12 1888 aa13.75□□□□□ -0.21
LINC00562-201ENST00000566385 GTF2E1P29083 439 aaPredicted RBP13.74□□□□□ -0.21
LINC00562-201ENST00000566385 ATP2B3Q16720 1220 aa13.74□□□□□ -0.21
LINC00562-201ENST00000566385 CCDC152Q4G0S7 254 aa13.74□□□□□ -0.21
LINC00562-201ENST00000566385 ZNF589Q86UQ0 364 aaPredicted RBP13.74□□□□□ -0.21
LINC00562-201ENST00000566385 HSCBQ8IWL3 235 aa13.74□□□□□ -0.21
LINC00562-201ENST00000566385 AKAP2Q9Y2D5 859 aa13.74□□□□□ -0.21
LINC00562-201ENST00000566385 WTIPA6NIX2 430 aaPredicted RBP13.74□□□□□ -0.21
LINC00562-201ENST00000566385 IFIT1P09914 478 aaKnown RBP13.74□□□□□ -0.21
LINC00562-201ENST00000566385 TXNRD1Q16881 649 aa13.74□□□□□ -0.21
LINC00562-201ENST00000566385 RAD50Q92878 1312 aa13.74□□□□□ -0.21
LINC00562-201ENST00000566385 LRP5O75197 1615 aa13.73□□□□□ -0.21
LINC00562-201ENST00000566385 RXRBP28702 533 aa13.73□□□□□ -0.21
LINC00562-201ENST00000566385 NBR1Q14596 966 aa13.73□□□□□ -0.21
LINC00562-201ENST00000566385 NBPF5PQ86XG9 351 aaPredicted RBP13.73□□□□□ -0.21
LINC00562-201ENST00000566385 RASEFQ8IZ41 740 aa13.73□□□□□ -0.21
LINC00562-201ENST00000566385 MPHOSPH8Q99549 860 aa13.73□□□□□ -0.21
LINC00562-201ENST00000566385 ANP32EQ9BTT0 268 aa13.73□□□□□ -0.21
LINC00562-201ENST00000566385 PAG1Q9NWQ8 432 aa13.73□□□□□ -0.21
LINC00562-201ENST00000566385 HSPA4P34932 840 aa13.73□□□□□ -0.21
LINC00562-201ENST00000566385 FKBP4Q02790 459 aaKnown RBP eCLIP13.73□□□□□ -0.21
LINC00562-201ENST00000566385 RABEP1Q15276 862 aa13.73□□□□□ -0.21
LINC00562-201ENST00000566385 GORABQ5T7V8 394 aa13.73□□□□□ -0.21
LINC00562-201ENST00000566385 POTEAQ6S8J7 498 aa13.72□□□□□ -0.21
LINC00562-201ENST00000566385 COL24A1Q17RW2 1714 aa13.72□□□□□ -0.21
LINC00562-201ENST00000566385 NFIXQ14938 502 aa13.72□□□□□ -0.21
LINC00562-201ENST00000566385 SLC27A3Q5K4L6 730 aa13.72□□□□□ -0.21
LINC00562-201ENST00000566385 CCDC158Q5M9N0 1113 aa13.72□□□□□ -0.21
LINC00562-201ENST00000566385 TTC39AQ5SRH9 613 aa13.72□□□□□ -0.21
LINC00562-201ENST00000566385 CCDC129Q6ZRS4 1044 aa13.72□□□□□ -0.21
LINC00562-201ENST00000566385 KBTBD3Q8NAB2 608 aa13.72□□□□□ -0.21
LINC00562-201ENST00000566385 RUFY2Q8WXA3 655 aa13.72□□□□□ -0.21
LINC00562-201ENST00000566385 FOXD4L1Q9NU39 408 aa13.72□□□□□ -0.21
LINC00562-201ENST00000566385 KIAA1211Q6ZU35 1233 aa13.71□□□□□ -0.21
LINC00562-201ENST00000566385 CELF1Q92879 486 aaKnown RBP13.71□□□□□ -0.21
LINC00562-201ENST00000566385 UPF3BQ9BZI7 483 aaKnown RBP13.71□□□□□ -0.21
LINC00562-201ENST00000566385 APBA3O96018 575 aa13.71□□□□□ -0.21
LINC00562-201ENST00000566385 FGFR2P21802 821 aa13.71□□□□□ -0.21
LINC00562-201ENST00000566385 MCAMP43121 646 aa13.71□□□□□ -0.21
LINC00562-201ENST00000566385 ZAP70P43403 619 aa13.71□□□□□ -0.21
LINC00562-201ENST00000566385 PHKA1P46020 1223 aa13.71□□□□□ -0.21
LINC00562-201ENST00000566385 NEK4P51957 841 aa13.71□□□□□ -0.21
LINC00562-201ENST00000566385 SF3B3Q15393 1217 aaKnown RBP13.71□□□□□ -0.21
LINC00562-201ENST00000566385 SLC10A5Q5PT55 438 aa13.71□□□□□ -0.21
LINC00562-201ENST00000566385 MROH5Q6ZUA9 1318 aa13.71□□□□□ -0.22
LINC00562-201ENST00000566385 AKAP11Q9UKA4 1901 aa13.71□□□□□ -0.22
LINC00562-201ENST00000566385 RTL9Q8NET4 1388 aa13.7□□□□□ -0.22
LINC00562-201ENST00000566385 K7ELQ4 463 aaPredicted RBP13.7□□□□□ -0.22
LINC00562-201ENST00000566385 RGL2O15211 777 aa13.7□□□□□ -0.22
LINC00562-201ENST00000566385 GYS1P13807 737 aa13.7□□□□□ -0.22
LINC00562-201ENST00000566385 COL9A3Q14050 684 aaPredicted RBP13.7□□□□□ -0.22
LINC00562-201ENST00000566385 TPTE2Q6XPS3 522 aa13.7□□□□□ -0.22
LINC00562-201ENST00000566385 SLC51AQ86UW1 340 aa13.7□□□□□ -0.22
LINC00562-201ENST00000566385 SNX14Q9Y5W7 946 aa13.7□□□□□ -0.22
LINC00562-201ENST00000566385 CCDC171Q6TFL3 1326 aa13.7□□□□□ -0.22
LINC00562-201ENST00000566385 MED23Q9ULK4 1368 aa13.7□□□□□ -0.22
LINC00562-201ENST00000566385 HIP1O00291 1037 aa13.7□□□□□ -0.22
LINC00562-201ENST00000566385 IGHMBP2P38935 993 aaKnown RBP13.7□□□□□ -0.22
LINC00562-201ENST00000566385 CHRNDQ07001 517 aa13.7□□□□□ -0.22
LINC00562-201ENST00000566385 MYO5AQ9Y4I1 1855 aaKnown RBP13.69□□□□□ -0.22
LINC00562-201ENST00000566385 MCCP23508 829 aa13.69□□□□□ -0.22
LINC00562-201ENST00000566385 PUM3Q15397 648 aaKnown RBP13.69□□□□□ -0.22
LINC00562-201ENST00000566385 ZNF827Q17R98 1081 aa13.69□□□□□ -0.22
LINC00562-201ENST00000566385 CCDC102BQ68D86 513 aa13.69□□□□□ -0.22
LINC00562-201ENST00000566385 PRPF40BQ6NWY9 871 aaKnown RBP13.69□□□□□ -0.22
LINC00562-201ENST00000566385 NYXQ9GZU5 481 aa13.69□□□□□ -0.22
LINC00562-201ENST00000566385 TAF6LQ9Y6J9 622 aa13.69□□□□□ -0.22
LINC00562-201ENST00000566385 HSP90B1P14625 803 aaKnown RBP13.69□□□□□ -0.22
LINC00562-201ENST00000566385 NECTIN1Q15223 517 aa13.69□□□□□ -0.22
LINC00562-201ENST00000566385 LPIN2Q92539 896 aa13.69□□□□□ -0.22
LINC00562-201ENST00000566385 MAP4K1Q92918 833 aa13.69□□□□□ -0.22
LINC00562-201ENST00000566385 NLRP3Q96P20 1036 aa13.69□□□□□ -0.22
LINC00562-201ENST00000566385 TNRC6CQ9HCJ0 1690 aaKnown RBP13.69□□□□□ -0.22
LINC00562-201ENST00000566385 CPA1P15085 419 aa13.68□□□□□ -0.22
LINC00562-201ENST00000566385 ANAPC15P60006 121 aa13.68□□□□□ -0.22
LINC00562-201ENST00000566385 ADCK5Q3MIX3 580 aa13.68□□□□□ -0.22
LINC00562-201ENST00000566385 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.68□□□□□ -0.22
LINC00562-201ENST00000566385 RBM8AQ9Y5S9 174 aaKnown RBP13.68□□□□□ -0.22
LINC00562-201ENST00000566385 NPHP1O15259 732 aa13.68□□□□□ -0.22
LINC00562-201ENST00000566385 EPB41L2O43491 1005 aaKnown RBP13.68□□□□□ -0.22
LINC00562-201ENST00000566385 ADRA2BP18089 450 aa13.68□□□□□ -0.22
LINC00562-201ENST00000566385 TM4SF1P30408 202 aa13.68□□□□□ -0.22
LINC00562-201ENST00000566385 ANKRD18AQ8IVF6 992 aa13.68□□□□□ -0.22
LINC00562-201ENST00000566385 CDC5LQ99459 802 aaKnown RBP13.68□□□□□ -0.22
LINC00562-201ENST00000566385 PLSCR1O15162 318 aa13.67□□□□□ -0.22
LINC00562-201ENST00000566385 CYP2E1P05181 493 aaPredicted RBP13.67□□□□□ -0.22
LINC00562-201ENST00000566385 SSFA2P28290 1259 aa13.67□□□□□ -0.22
LINC00562-201ENST00000566385 NOL8Q76FK4 1167 aaKnown RBP13.67□□□□□ -0.22
LINC00562-201ENST00000566385 BCAMP50895 628 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms