RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 CTNNA3Q9UI47 895 aa15.91■□□□□ 0.14
LINC00563-201ENST00000566370 NRAPQ86VF7 1730 aa15.9■□□□□ 0.14
LINC00563-201ENST00000566370 LETM1O95202 739 aaPredicted RBP15.9■□□□□ 0.14
LINC00563-201ENST00000566370 GJB2P29033 226 aa15.9■□□□□ 0.14
LINC00563-201ENST00000566370 ZSCAN23Q3MJ62 389 aa15.9■□□□□ 0.14
LINC00563-201ENST00000566370 LRRC24Q50LG9 513 aa15.9■□□□□ 0.14
LINC00563-201ENST00000566370 NLRP10Q86W26 655 aa15.9■□□□□ 0.14
LINC00563-201ENST00000566370 DZIP3Q86Y13 1208 aaKnown RBP15.9■□□□□ 0.14
LINC00563-201ENST00000566370 SMARCC1Q92922 1105 aaPredicted RBP15.9■□□□□ 0.14
LINC00563-201ENST00000566370 TRIM44Q96DX7 344 aaPredicted RBP15.9■□□□□ 0.14
LINC00563-201ENST00000566370 TRMT112Q9UI30 125 aaKnown RBP15.9■□□□□ 0.14
LINC00563-201ENST00000566370 SPATA31A1Q5TZJ5 1347 aa15.89■□□□□ 0.13
LINC00563-201ENST00000566370 PDE8AO60658 829 aa15.89■□□□□ 0.13
LINC00563-201ENST00000566370 F13A1P00488 732 aa15.89■□□□□ 0.13
LINC00563-201ENST00000566370 SYT1P21579 422 aa15.89■□□□□ 0.13
LINC00563-201ENST00000566370 CTSWP56202 376 aa15.89■□□□□ 0.13
LINC00563-201ENST00000566370 TIMM10P62072 90 aa15.89■□□□□ 0.13
LINC00563-201ENST00000566370 TTF1Q15361 905 aaPredicted RBP15.89■□□□□ 0.13
LINC00563-201ENST00000566370 METTL24Q5JXM2 366 aa15.89■□□□□ 0.13
LINC00563-201ENST00000566370 ZMYM1Q5SVZ6 1142 aa15.89■□□□□ 0.13
LINC00563-201ENST00000566370 ZNF589Q86UQ0 364 aaPredicted RBP15.89■□□□□ 0.13
LINC00563-201ENST00000566370 TMEM87AQ8NBN3 555 aa15.89■□□□□ 0.13
LINC00563-201ENST00000566370 FAM89AQ96GI7 184 aa15.89■□□□□ 0.13
LINC00563-201ENST00000566370 ZNF594Q96JF6 807 aaPredicted RBP15.89■□□□□ 0.13
LINC00563-201ENST00000566370 CNNM1Q9NRU3 951 aa15.89■□□□□ 0.13
LINC00563-201ENST00000566370 IRS4O14654 1257 aaPredicted RBP15.88■□□□□ 0.13
LINC00563-201ENST00000566370 CCDC173Q0VFZ6 552 aa15.88■□□□□ 0.13
LINC00563-201ENST00000566370 ATP2B3Q16720 1220 aa15.88■□□□□ 0.13
LINC00563-201ENST00000566370 LDHAL6AQ6ZMR3 332 aa15.88■□□□□ 0.13
LINC00563-201ENST00000566370 EDC3Q96F86 508 aaKnown RBP15.88■□□□□ 0.13
LINC00563-201ENST00000566370 CCDC9Q9Y3X0 531 aaKnown RBP15.88■□□□□ 0.13
LINC00563-201ENST00000566370 CICQ96RK0 1608 aaPredicted RBP15.88■□□□□ 0.13
LINC00563-201ENST00000566370 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.88■□□□□ 0.13
LINC00563-201ENST00000566370 NUP98P52948 1817 aa15.88■□□□□ 0.13
LINC00563-201ENST00000566370 CPA1P15085 419 aa15.87■□□□□ 0.13
LINC00563-201ENST00000566370 NASPP49321 788 aaPredicted RBP15.87■□□□□ 0.13
LINC00563-201ENST00000566370 PRIM1P49642 420 aaKnown RBP15.87■□□□□ 0.13
LINC00563-201ENST00000566370 PARP10Q53GL7 1025 aa15.87■□□□□ 0.13
LINC00563-201ENST00000566370 CCDC87Q9NVE4 849 aa15.87■□□□□ 0.13
LINC00563-201ENST00000566370 KAT6BQ8WYB5 2073 aa15.87■□□□□ 0.13
LINC00563-201ENST00000566370 A0A0G2JS52 829 aa15.86■□□□□ 0.13
LINC00563-201ENST00000566370 UQCRFS1P1P0C7P4 283 aa15.86■□□□□ 0.13
LINC00563-201ENST00000566370 ITGA6P23229 1130 aa15.86■□□□□ 0.13
LINC00563-201ENST00000566370 GPTP24298 496 aa15.86■□□□□ 0.13
LINC00563-201ENST00000566370 LARP1BQ659C4 914 aaKnown RBP15.86■□□□□ 0.13
LINC00563-201ENST00000566370 XAGE2Q96GT9 111 aa15.86■□□□□ 0.13
LINC00563-201ENST00000566370 ZNF652Q9Y2D9 606 aa15.86■□□□□ 0.13
LINC00563-201ENST00000566370 ZBTB1Q9Y2K1 713 aa15.86■□□□□ 0.13
LINC00563-201ENST00000566370 VPS37CA5D8V6 355 aaPredicted RBP15.85■□□□□ 0.13
LINC00563-201ENST00000566370 TOM1O60784 492 aa15.85■□□□□ 0.13
LINC00563-201ENST00000566370 ADAMTS2O95450 1211 aa15.85■□□□□ 0.13
LINC00563-201ENST00000566370 FKBP4Q02790 459 aaKnown RBP eCLIP15.85■□□□□ 0.13
LINC00563-201ENST00000566370 ME3Q16798 604 aa15.85■□□□□ 0.13
LINC00563-201ENST00000566370 LRSAM1Q6UWE0 723 aa15.85■□□□□ 0.13
LINC00563-201ENST00000566370 BARGINQ6ZT62 677 aa15.85■□□□□ 0.13
LINC00563-201ENST00000566370 ZNF512BQ96KM6 892 aaPredicted RBP15.85■□□□□ 0.13
LINC00563-201ENST00000566370 PUS3Q9BZE2 481 aaKnown RBP15.85■□□□□ 0.13
LINC00563-201ENST00000566370 TPCN1Q9ULQ1 816 aa15.85■□□□□ 0.13
LINC00563-201ENST00000566370 LTBP4Q8N2S1 1624 aa15.85■□□□□ 0.13
LINC00563-201ENST00000566370 MROH5Q6ZUA9 1318 aa15.85■□□□□ 0.13
LINC00563-201ENST00000566370 UBE2HP62256 183 aa15.85■□□□□ 0.13
LINC00563-201ENST00000566370 WASHC4Q2M389 1173 aa15.85■□□□□ 0.13
LINC00563-201ENST00000566370 TTLL11Q8NHH1 800 aa15.85■□□□□ 0.13
LINC00563-201ENST00000566370 GPT2Q8TD30 523 aa15.85■□□□□ 0.13
LINC00563-201ENST00000566370 LARGE1O95461 756 aa15.84■□□□□ 0.13
LINC00563-201ENST00000566370 ATP6V1AP38606 617 aa15.84■□□□□ 0.13
LINC00563-201ENST00000566370 HLFQ16534 295 aa15.84■□□□□ 0.13
LINC00563-201ENST00000566370 IMMTQ16891 758 aaKnown RBP15.84■□□□□ 0.13
LINC00563-201ENST00000566370 DHX32Q7L7V1 743 aaKnown RBP15.84■□□□□ 0.13
LINC00563-201ENST00000566370 USP48Q86UV5 1035 aa15.84■□□□□ 0.13
LINC00563-201ENST00000566370 LLPHQ9BRT6 129 aaKnown RBP15.84■□□□□ 0.13
LINC00563-201ENST00000566370 TBC1D2BQ9UPU7 963 aa15.84■□□□□ 0.13
LINC00563-201ENST00000566370 SPATA31A5Q5VU36 1347 aa15.83■□□□□ 0.13
LINC00563-201ENST00000566370 SPATA31A7Q8IWB4 1347 aa15.83■□□□□ 0.13
LINC00563-201ENST00000566370 MYH7P12883 1935 aa15.83■□□□□ 0.12
LINC00563-201ENST00000566370 RREB1Q92766 1687 aa15.83■□□□□ 0.12
LINC00563-201ENST00000566370 CYP21A2P08686 494 aa15.83■□□□□ 0.12
LINC00563-201ENST00000566370 KRT85P78386 507 aa15.83■□□□□ 0.12
LINC00563-201ENST00000566370 CCDC129Q6ZRS4 1044 aa15.83■□□□□ 0.12
LINC00563-201ENST00000566370 Q6ZUG5 572 aa15.83■□□□□ 0.12
LINC00563-201ENST00000566370 ZNF34Q8IZ26 560 aa15.83■□□□□ 0.12
LINC00563-201ENST00000566370 FAM184AQ8NB25 1140 aa15.83■□□□□ 0.12
LINC00563-201ENST00000566370 APPBP2Q92624 585 aa15.83■□□□□ 0.12
LINC00563-201ENST00000566370 LARP6Q9BRS8 491 aaKnown RBP15.83■□□□□ 0.12
LINC00563-201ENST00000566370 UTP14AQ9BVJ6 771 aaKnown RBP15.83■□□□□ 0.12
LINC00563-201ENST00000566370 MAST3O60307 1309 aa15.82■□□□□ 0.12
LINC00563-201ENST00000566370 SLC5A1P13866 664 aa15.82■□□□□ 0.12
LINC00563-201ENST00000566370 EIF5P55010 431 aaKnown RBP15.82■□□□□ 0.12
LINC00563-201ENST00000566370 HMGN5P82970 282 aaKnown RBP15.82■□□□□ 0.12
LINC00563-201ENST00000566370 TOB2Q14106 344 aaPredicted RBP15.82■□□□□ 0.12
LINC00563-201ENST00000566370 PUM3Q15397 648 aaKnown RBP15.82■□□□□ 0.12
LINC00563-201ENST00000566370 RIC1Q4ADV7 1423 aa15.82■□□□□ 0.12
LINC00563-201ENST00000566370 CCDC183Q5T5S1 534 aa15.82■□□□□ 0.12
LINC00563-201ENST00000566370 GAS2L3Q86XJ1 694 aa15.82■□□□□ 0.12
LINC00563-201ENST00000566370 SEC62Q99442 399 aaKnown RBP15.82■□□□□ 0.12
LINC00563-201ENST00000566370 TSPY26PQ9H489 355 aa15.82■□□□□ 0.12
LINC00563-201ENST00000566370 GREM2Q9H772 168 aa15.82■□□□□ 0.12
LINC00563-201ENST00000566370 MTMR6Q9Y217 621 aa15.82■□□□□ 0.12
LINC00563-201ENST00000566370 RIPOR2Q9Y4F9 1068 aa15.82■□□□□ 0.12
LINC00563-201ENST00000566370 NDUFB9Q9Y6M9 179 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms