RNA–Protein interactions for RNA: ENST00000566108.2

TNRC6A-211, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 3

Gene TNRC6A, Length 454 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-211ENST00000566108 CNTNAP1P78357 1384 aa16.48■□□□□ 0.23
TNRC6A-211ENST00000566108 XDHP47989 1333 aa16.47■□□□□ 0.23
TNRC6A-211ENST00000566108 DUOX1Q9NRD9 1551 aa16.47■□□□□ 0.23
TNRC6A-211ENST00000566108 TBC1D16Q8TBP0 767 aa16.47■□□□□ 0.23
TNRC6A-211ENST00000566108 JARID2Q92833 1246 aaPredicted RBP16.47■□□□□ 0.23
TNRC6A-211ENST00000566108 AIDAQ96BJ3 306 aa16.47■□□□□ 0.23
TNRC6A-211ENST00000566108 DBNDD1Q9H9R9 158 aa16.47■□□□□ 0.23
TNRC6A-211ENST00000566108 SEC31BQ9NQW1 1179 aa16.47■□□□□ 0.23
TNRC6A-211ENST00000566108 PODXL2Q9NZ53 605 aa16.47■□□□□ 0.23
TNRC6A-211ENST00000566108 LTBP1Q14766 1721 aa16.47■□□□□ 0.23
TNRC6A-211ENST00000566108 NEURL1BA8MQ27 555 aa16.46■□□□□ 0.23
TNRC6A-211ENST00000566108 ECE2O60344 883 aa16.46■□□□□ 0.23
TNRC6A-211ENST00000566108 ATXN8OSP0DMR3 200 aa16.46■□□□□ 0.23
TNRC6A-211ENST00000566108 HSPA1AP0DMV8 641 aaKnown RBP16.46■□□□□ 0.23
TNRC6A-211ENST00000566108 HSPA1BP0DMV9 641 aaKnown RBP16.46■□□□□ 0.23
TNRC6A-211ENST00000566108 RPS12P25398 132 aaKnown RBP16.46■□□□□ 0.23
TNRC6A-211ENST00000566108 IGHMBP2P38935 993 aaKnown RBP16.46■□□□□ 0.23
TNRC6A-211ENST00000566108 UBE3BQ7Z3V4 1068 aa16.46■□□□□ 0.23
TNRC6A-211ENST00000566108 DNAAF4Q8WXU2 420 aa16.46■□□□□ 0.23
TNRC6A-211ENST00000566108 POLLQ9UGP5 575 aa16.46■□□□□ 0.23
TNRC6A-211ENST00000566108 CNOT7Q9UIV1 285 aaKnown RBP16.46■□□□□ 0.23
TNRC6A-211ENST00000566108 IGKV5-2P06315 115 aa16.45■□□□□ 0.22
TNRC6A-211ENST00000566108 EXOSC9Q06265 439 aaKnown RBP16.45■□□□□ 0.22
TNRC6A-211ENST00000566108 C1QBPQ07021 282 aaKnown RBP16.45■□□□□ 0.22
TNRC6A-211ENST00000566108 CWF19L2Q2TBE0 894 aaKnown RBP16.45■□□□□ 0.22
TNRC6A-211ENST00000566108 PAXIP1Q6ZW49 1069 aaPredicted RBP16.45■□□□□ 0.22
TNRC6A-211ENST00000566108 ZC3H15Q8WU90 426 aaKnown RBP16.45■□□□□ 0.22
TNRC6A-211ENST00000566108 DPF2Q92785 391 aa16.45■□□□□ 0.22
TNRC6A-211ENST00000566108 TRPM7Q96QT4 1865 aa16.45■□□□□ 0.22
TNRC6A-211ENST00000566108 ATP2B4P23634 1241 aa16.44■□□□□ 0.22
TNRC6A-211ENST00000566108 DOK7Q18PE1 504 aa16.44■□□□□ 0.22
TNRC6A-211ENST00000566108 DEFB115Q30KQ5 88 aa16.44■□□□□ 0.22
TNRC6A-211ENST00000566108 G2E3Q7L622 706 aa16.44■□□□□ 0.22
TNRC6A-211ENST00000566108 MICALL2Q8IY33 904 aa16.44■□□□□ 0.22
TNRC6A-211ENST00000566108 LINS1Q8NG48 757 aa16.44■□□□□ 0.22
TNRC6A-211ENST00000566108 RTL9Q8NET4 1388 aa16.43■□□□□ 0.22
TNRC6A-211ENST00000566108 YDJCA8MPS7 323 aa16.43■□□□□ 0.22
TNRC6A-211ENST00000566108 PSMD14O00487 310 aa16.43■□□□□ 0.22
TNRC6A-211ENST00000566108 VAMP4O75379 141 aa16.43■□□□□ 0.22
TNRC6A-211ENST00000566108 ECE1P42892 770 aa16.43■□□□□ 0.22
TNRC6A-211ENST00000566108 GCKRQ14397 625 aa16.43■□□□□ 0.22
TNRC6A-211ENST00000566108 TTLL11Q8NHH1 800 aa16.43■□□□□ 0.22
TNRC6A-211ENST00000566108 RASSF10A6NK89 507 aa16.42■□□□□ 0.22
TNRC6A-211ENST00000566108 CDC37L1Q7L3B6 337 aa16.42■□□□□ 0.22
TNRC6A-211ENST00000566108 MPHOSPH8Q99549 860 aa16.42■□□□□ 0.22
TNRC6A-211ENST00000566108 BSDC1Q9NW68 430 aaPredicted RBP16.42■□□□□ 0.22
TNRC6A-211ENST00000566108 SPEF2Q9C093 1822 aa16.42■□□□□ 0.22
TNRC6A-211ENST00000566108 H7C1W4 665 aa16.41■□□□□ 0.22
TNRC6A-211ENST00000566108 VEGFBP49765 207 aa16.41■□□□□ 0.22
TNRC6A-211ENST00000566108 GPR101Q96P66 508 aaPredicted RBP16.41■□□□□ 0.22
TNRC6A-211ENST00000566108 GREM2Q9H772 168 aa16.41■□□□□ 0.22
TNRC6A-211ENST00000566108 CELF2O95319 508 aaKnown RBP16.4■□□□□ 0.22
TNRC6A-211ENST00000566108 KCNJ4P48050 445 aa16.4■□□□□ 0.22
TNRC6A-211ENST00000566108 DCPSQ96C86 337 aaKnown RBP16.4■□□□□ 0.22
TNRC6A-211ENST00000566108 BEGAINQ9BUH8 593 aa16.4■□□□□ 0.22
TNRC6A-211ENST00000566108 PLA2G12BQ9BX93 195 aa16.4■□□□□ 0.22
TNRC6A-211ENST00000566108 ANKRD2Q9GZV1 360 aa16.4■□□□□ 0.22
TNRC6A-211ENST00000566108 ZBTB12Q9Y330 459 aaPredicted RBP16.4■□□□□ 0.22
TNRC6A-211ENST00000566108 CHMP3Q9Y3E7 222 aa16.4■□□□□ 0.22
TNRC6A-211ENST00000566108 TRAF5O00463 557 aa16.39■□□□□ 0.21
TNRC6A-211ENST00000566108 ITGA6P23229 1130 aa16.39■□□□□ 0.21
TNRC6A-211ENST00000566108 MAP2K1Q02750 393 aaPredicted RBP16.39■□□□□ 0.21
TNRC6A-211ENST00000566108 PODNQ7Z5L7 613 aa16.39■□□□□ 0.21
TNRC6A-211ENST00000566108 TRPM4Q8TD43 1214 aa16.39■□□□□ 0.21
TNRC6A-211ENST00000566108 ZNF408Q9H9D4 720 aa16.39■□□□□ 0.21
TNRC6A-211ENST00000566108 COL4A1P02462 1669 aa16.39■□□□□ 0.21
TNRC6A-211ENST00000566108 MED23Q9ULK4 1368 aa16.38■□□□□ 0.21
TNRC6A-211ENST00000566108 ANKRD18BA2A2Z9 1011 aa16.38■□□□□ 0.21
TNRC6A-211ENST00000566108 VIL1P09327 827 aaKnown RBP16.38■□□□□ 0.21
TNRC6A-211ENST00000566108 GRM1Q13255 1194 aa16.38■□□□□ 0.21
TNRC6A-211ENST00000566108 TBC1D10BQ4KMP7 808 aaPredicted RBP16.38■□□□□ 0.21
TNRC6A-211ENST00000566108 TNS4Q8IZW8 715 aa16.38■□□□□ 0.21
TNRC6A-211ENST00000566108 AGBL3Q8NEM8 1001 aa16.38■□□□□ 0.21
TNRC6A-211ENST00000566108 GLIS2Q9BZE0 524 aaPredicted RBP16.38■□□□□ 0.21
TNRC6A-211ENST00000566108 C9orf78Q9NZ63 289 aaPredicted RBP16.38■□□□□ 0.21
TNRC6A-211ENST00000566108 PGAP2Q9UHJ9 254 aa16.38■□□□□ 0.21
TNRC6A-211ENST00000566108 MINPP1Q9UNW1 487 aa16.38■□□□□ 0.21
TNRC6A-211ENST00000566108 LEMD3Q9Y2U8 911 aa16.38■□□□□ 0.21
TNRC6A-211ENST00000566108 WDR33Q9C0J8 1336 aaKnown RBP16.38■□□□□ 0.21
TNRC6A-211ENST00000566108 USP17L3A6NCW0 530 aa16.37■□□□□ 0.21
TNRC6A-211ENST00000566108 USP17L4A6NCW7 530 aa16.37■□□□□ 0.21
TNRC6A-211ENST00000566108 CTCFP49711 727 aaPredicted RBP16.37■□□□□ 0.21
TNRC6A-211ENST00000566108 CCT4P50991 539 aaKnown RBP16.37■□□□□ 0.21
TNRC6A-211ENST00000566108 IFIT5Q13325 482 aaKnown RBP16.37■□□□□ 0.21
TNRC6A-211ENST00000566108 KIF4BQ2VIQ3 1234 aa16.37■□□□□ 0.21
TNRC6A-211ENST00000566108 FAM161AQ3B820 660 aa16.37■□□□□ 0.21
TNRC6A-211ENST00000566108 TAF7LQ5H9L4 462 aa16.37■□□□□ 0.21
TNRC6A-211ENST00000566108 RBM26Q5T8P6 1007 aaKnown RBP16.37■□□□□ 0.21
TNRC6A-211ENST00000566108 RSBN1LQ6PCB5 846 aaPredicted RBP16.37■□□□□ 0.21
TNRC6A-211ENST00000566108 USP17L1Q7RTZ2 530 aa16.37■□□□□ 0.21
TNRC6A-211ENST00000566108 SAMD7Q7Z3H4 446 aa16.37■□□□□ 0.21
TNRC6A-211ENST00000566108 FBXW7Q969H0 707 aa16.37■□□□□ 0.21
TNRC6A-211ENST00000566108 TLL2Q9Y6L7 1015 aa16.37■□□□□ 0.21
TNRC6A-211ENST00000566108 PCNTO95613 3336 aa16.36■□□□□ 0.21
TNRC6A-211ENST00000566108 E9PSI1 815 aa16.36■□□□□ 0.21
TNRC6A-211ENST00000566108 COL13A1Q5TAT6 717 aaPredicted RBP16.36■□□□□ 0.21
TNRC6A-211ENST00000566108 SLC4A10Q6U841 1118 aa16.36■□□□□ 0.21
TNRC6A-211ENST00000566108 KRT26Q7Z3Y9 468 aa16.36■□□□□ 0.21
TNRC6A-211ENST00000566108 SULF1Q8IWU6 871 aa16.36■□□□□ 0.21
TNRC6A-211ENST00000566108 CAPNS2Q96L46 248 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms