RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 IL15P40933 162 aaPredicted RBP23.46■■□□□ 1.35
CSPG4P13-201ENST00000565545 FAM161AQ3B820 660 aa23.46■■□□□ 1.35
CSPG4P13-201ENST00000565545 CCDC152Q4G0S7 254 aa23.46■■□□□ 1.35
CSPG4P13-201ENST00000565545 ZNF219Q9P2Y4 722 aaPredicted RBP23.46■■□□□ 1.35
CSPG4P13-201ENST00000565545 WDR90Q96KV7 1748 aa23.45■■□□□ 1.34
CSPG4P13-201ENST00000565545 EYA2O00167 538 aa23.45■■□□□ 1.34
CSPG4P13-201ENST00000565545 SASH1O94885 1247 aa23.45■■□□□ 1.34
CSPG4P13-201ENST00000565545 HCLS1P14317 486 aaPredicted RBP23.45■■□□□ 1.34
CSPG4P13-201ENST00000565545 PRELPP51888 382 aa23.45■■□□□ 1.34
CSPG4P13-201ENST00000565545 ERFEQ4G0M1 354 aa23.45■■□□□ 1.34
CSPG4P13-201ENST00000565545 NUTM1Q86Y26 1132 aa23.45■■□□□ 1.34
CSPG4P13-201ENST00000565545 KLHDC4Q8TBB5 520 aa23.45■■□□□ 1.34
CSPG4P13-201ENST00000565545 SIL1Q9H173 461 aa23.45■■□□□ 1.34
CSPG4P13-201ENST00000565545 AOX1Q06278 1338 aa23.44■■□□□ 1.34
CSPG4P13-201ENST00000565545 SALL3Q9BXA9 1300 aa23.44■■□□□ 1.34
CSPG4P13-201ENST00000565545 NPHP1O15259 732 aa23.44■■□□□ 1.34
CSPG4P13-201ENST00000565545 ITGA6P23229 1130 aa23.44■■□□□ 1.34
CSPG4P13-201ENST00000565545 PDE6BP35913 854 aa23.44■■□□□ 1.34
CSPG4P13-201ENST00000565545 SF3B3Q15393 1217 aaKnown RBP23.44■■□□□ 1.34
CSPG4P13-201ENST00000565545 TAF7LQ5H9L4 462 aa23.44■■□□□ 1.34
CSPG4P13-201ENST00000565545 DPY19L2Q6NUT2 758 aa23.44■■□□□ 1.34
CSPG4P13-201ENST00000565545 GREM2Q9H772 168 aa23.44■■□□□ 1.34
CSPG4P13-201ENST00000565545 IL1RAPL2Q9NP60 686 aa23.44■■□□□ 1.34
CSPG4P13-201ENST00000565545 NFKBIEO00221 500 aa23.43■■□□□ 1.34
CSPG4P13-201ENST00000565545 BMP2KLQ5H9B9 411 aa23.43■■□□□ 1.34
CSPG4P13-201ENST00000565545 CCDC24Q8N4L8 307 aa23.43■■□□□ 1.34
CSPG4P13-201ENST00000565545 BRIP1Q9BX63 1249 aa23.43■■□□□ 1.34
CSPG4P13-201ENST00000565545 STAP2Q9UGK3 403 aa23.43■■□□□ 1.34
CSPG4P13-201ENST00000565545 RIC1Q4ADV7 1423 aa23.42■■□□□ 1.34
CSPG4P13-201ENST00000565545 C21orf2O43822 256 aa23.42■■□□□ 1.34
CSPG4P13-201ENST00000565545 MX1P20591 662 aa23.42■■□□□ 1.34
CSPG4P13-201ENST00000565545 PDE1AP54750 535 aa23.42■■□□□ 1.34
CSPG4P13-201ENST00000565545 COL13A1Q5TAT6 717 aaPredicted RBP23.42■■□□□ 1.34
CSPG4P13-201ENST00000565545 GPR108Q9NPR9 543 aa23.42■■□□□ 1.34
CSPG4P13-201ENST00000565545 ATG9AQ7Z3C6 839 aa23.41■■□□□ 1.34
CSPG4P13-201ENST00000565545 NLRP3Q96P20 1036 aa23.41■■□□□ 1.34
CSPG4P13-201ENST00000565545 SBF1O95248 1867 aa23.41■■□□□ 1.34
CSPG4P13-201ENST00000565545 TTC22Q5TAA0 569 aa23.4■■□□□ 1.34
CSPG4P13-201ENST00000565545 PRR5LQ6MZQ0 368 aa23.4■■□□□ 1.34
CSPG4P13-201ENST00000565545 CNBD1Q8NA66 436 aa23.4■■□□□ 1.34
CSPG4P13-201ENST00000565545 OTUD7AQ8TE49 926 aaPredicted RBP23.4■■□□□ 1.34
CSPG4P13-201ENST00000565545 ZNF594Q96JF6 807 aaPredicted RBP23.4■■□□□ 1.34
CSPG4P13-201ENST00000565545 CCDC85AQ96PX6 553 aaPredicted RBP23.4■■□□□ 1.34
CSPG4P13-201ENST00000565545 TNRC6CQ9HCJ0 1690 aaKnown RBP23.4■■□□□ 1.34
CSPG4P13-201ENST00000565545 TTC41PQ6P2S7 1318 aa23.39■■□□□ 1.34
CSPG4P13-201ENST00000565545 IFIT2P09913 472 aaKnown RBP23.39■■□□□ 1.33
CSPG4P13-201ENST00000565545 GPATCH3Q96I76 525 aa23.39■■□□□ 1.33
CSPG4P13-201ENST00000565545 ABCC12Q96J65 1359 aa23.39■■□□□ 1.33
CSPG4P13-201ENST00000565545 TFCP2Q12800 502 aa23.38■■□□□ 1.33
CSPG4P13-201ENST00000565545 AACSQ86V21 672 aa23.38■■□□□ 1.33
CSPG4P13-201ENST00000565545 CDC5LQ99459 802 aaKnown RBP23.38■■□□□ 1.33
CSPG4P13-201ENST00000565545 BACH2Q9BYV9 841 aa23.38■■□□□ 1.33
CSPG4P13-201ENST00000565545 NRXN2Q9P2S2 1712 aa23.37■■□□□ 1.33
CSPG4P13-201ENST00000565545 ST5P78524 1137 aa23.37■■□□□ 1.33
CSPG4P13-201ENST00000565545 LRRC24Q50LG9 513 aa23.37■■□□□ 1.33
CSPG4P13-201ENST00000565545 LDHAL6AQ6ZMR3 332 aa23.37■■□□□ 1.33
CSPG4P13-201ENST00000565545 BCL11AQ9H165 835 aa23.37■■□□□ 1.33
CSPG4P13-201ENST00000565545 CEP126Q9P2H0 1117 aa23.37■■□□□ 1.33
CSPG4P13-201ENST00000565545 CAPN15O75808 1086 aa23.36■■□□□ 1.33
CSPG4P13-201ENST00000565545 TNNI3KQ59H18 835 aa23.36■■□□□ 1.33
CSPG4P13-201ENST00000565545 CNKSR1Q969H4 720 aa23.36■■□□□ 1.33
CSPG4P13-201ENST00000565545 EAF2Q96CJ1 260 aaPredicted RBP23.36■■□□□ 1.33
CSPG4P13-201ENST00000565545 AKAP2Q9Y2D5 859 aa23.36■■□□□ 1.33
CSPG4P13-201ENST00000565545 RIPOR2Q9Y4F9 1068 aa23.36■■□□□ 1.33
CSPG4P13-201ENST00000565545 FPGT-TNNI3KV9GXZ4 949 aa23.36■■□□□ 1.33
CSPG4P13-201ENST00000565545 IGHMBP2P38935 993 aaKnown RBP23.35■■□□□ 1.33
CSPG4P13-201ENST00000565545 C8orf34Q49A92 452 aa23.35■■□□□ 1.33
CSPG4P13-201ENST00000565545 TNS4Q8IZW8 715 aa23.35■■□□□ 1.33
CSPG4P13-201ENST00000565545 PUS3Q9BZE2 481 aaKnown RBP23.35■■□□□ 1.33
CSPG4P13-201ENST00000565545 TAOK3Q9H2K8 898 aa23.35■■□□□ 1.33
CSPG4P13-201ENST00000565545 CNNM1Q9NRU3 951 aa23.35■■□□□ 1.33
CSPG4P13-201ENST00000565545 MROH5Q6ZUA9 1318 aa23.34■■□□□ 1.33
CSPG4P13-201ENST00000565545 POTECB2RU33 542 aa23.34■■□□□ 1.33
CSPG4P13-201ENST00000565545 ERC2O15083 957 aa23.34■■□□□ 1.33
CSPG4P13-201ENST00000565545 MPHOSPH8Q99549 860 aa23.34■■□□□ 1.33
CSPG4P13-201ENST00000565545 ECHDC1Q9NTX5 307 aa23.34■■□□□ 1.33
CSPG4P13-201ENST00000565545 TSHZ2Q9NRE2 1034 aa23.33■■□□□ 1.33
CSPG4P13-201ENST00000565545 GLRX3O76003 335 aaKnown RBP23.32■■□□□ 1.32
CSPG4P13-201ENST00000565545 GSPT1P15170 499 aaKnown RBP23.32■■□□□ 1.32
CSPG4P13-201ENST00000565545 STYK1Q6J9G0 422 aa23.32■■□□□ 1.32
CSPG4P13-201ENST00000565545 SEC31BQ9NQW1 1179 aa23.32■■□□□ 1.32
CSPG4P13-201ENST00000565545 HSPA1AP0DMV8 641 aaKnown RBP23.31■■□□□ 1.32
CSPG4P13-201ENST00000565545 HSPA1BP0DMV9 641 aaKnown RBP23.31■■□□□ 1.32
CSPG4P13-201ENST00000565545 METTL24Q5JXM2 366 aa23.31■■□□□ 1.32
CSPG4P13-201ENST00000565545 SOGA3Q5TF21 947 aa23.31■■□□□ 1.32
CSPG4P13-201ENST00000565545 C3orf67Q6ZVT6 689 aa23.31■■□□□ 1.32
CSPG4P13-201ENST00000565545 ANKRD18AQ8IVF6 992 aa23.31■■□□□ 1.32
CSPG4P13-201ENST00000565545 MASTLQ96GX5 879 aa23.31■■□□□ 1.32
CSPG4P13-201ENST00000565545 CCDC8Q9H0W5 538 aaPredicted RBP23.31■■□□□ 1.32
CSPG4P13-201ENST00000565545 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.31■■□□□ 1.32
CSPG4P13-201ENST00000565545 DLEC1Q9Y238 1755 aa23.3■■□□□ 1.32
CSPG4P13-201ENST00000565545 EIF5BO60841 1220 aaKnown RBP23.3■■□□□ 1.32
CSPG4P13-201ENST00000565545 SRGNP10124 158 aa23.3■■□□□ 1.32
CSPG4P13-201ENST00000565545 PRPF40BQ6NWY9 871 aaKnown RBP23.3■■□□□ 1.32
CSPG4P13-201ENST00000565545 DDX46Q7L014 1031 aaKnown RBP23.3■■□□□ 1.32
CSPG4P13-201ENST00000565545 PI4K2BQ8TCG2 481 aa23.3■■□□□ 1.32
CSPG4P13-201ENST00000565545 ZNF609O15014 1411 aa23.3■■□□□ 1.32
CSPG4P13-201ENST00000565545 LTBP3Q9NS15 1303 aa23.3■■□□□ 1.32
CSPG4P13-201ENST00000565545 SPEF2Q9C093 1822 aa23.29■■□□□ 1.32
CSPG4P13-201ENST00000565545 DDNO94850 711 aaPredicted RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms