RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 FKBP5Q13451 457 aaPredicted RBP20.04■□□□□ 0.8
CDH3-204ENST00000565453 GCKRQ14397 625 aa20.04■□□□□ 0.8
CDH3-204ENST00000565453 ANKRD18AQ8IVF6 992 aa20.04■□□□□ 0.8
CDH3-204ENST00000565453 BCL2L13Q9BXK5 485 aa20.04■□□□□ 0.8
CDH3-204ENST00000565453 PGAP2Q9UHJ9 254 aa20.04■□□□□ 0.8
CDH3-204ENST00000565453 SHTN1A0MZ66 631 aa20.03■□□□□ 0.8
CDH3-204ENST00000565453 UFL1O94874 794 aa20.03■□□□□ 0.8
CDH3-204ENST00000565453 HSPA1AP0DMV8 641 aaKnown RBP20.03■□□□□ 0.8
CDH3-204ENST00000565453 HSPA1BP0DMV9 641 aaKnown RBP20.03■□□□□ 0.8
CDH3-204ENST00000565453 HIRAP54198 1017 aaPredicted RBP20.03■□□□□ 0.8
CDH3-204ENST00000565453 DOK7Q18PE1 504 aa20.03■□□□□ 0.8
CDH3-204ENST00000565453 UBE3BQ7Z3V4 1068 aa20.03■□□□□ 0.8
CDH3-204ENST00000565453 LINS1Q8NG48 757 aa20.03■□□□□ 0.8
CDH3-204ENST00000565453 PLA2G12BQ9BX93 195 aa20.03■□□□□ 0.8
CDH3-204ENST00000565453 MYH16Q9H6N6 1097 aa20.03■□□□□ 0.8
CDH3-204ENST00000565453 GREM2Q9H772 168 aa20.03■□□□□ 0.8
CDH3-204ENST00000565453 KCNQ5Q9NR82 932 aa20.03■□□□□ 0.8
CDH3-204ENST00000565453 GGA1Q9UJY5 639 aa20.03■□□□□ 0.8
CDH3-204ENST00000565453 ZBTB12Q9Y330 459 aaPredicted RBP20.03■□□□□ 0.8
CDH3-204ENST00000565453 TRPM4Q8TD43 1214 aa20.02■□□□□ 0.8
CDH3-204ENST00000565453 DPF2Q92785 391 aa20.02■□□□□ 0.8
CDH3-204ENST00000565453 CDC5LQ99459 802 aaKnown RBP20.02■□□□□ 0.8
CDH3-204ENST00000565453 ANKIB1Q9P2G1 1089 aa20.02■□□□□ 0.8
CDH3-204ENST00000565453 CNOT7Q9UIV1 285 aaKnown RBP20.02■□□□□ 0.8
CDH3-204ENST00000565453 XDHP47989 1333 aa20.02■□□□□ 0.79
CDH3-204ENST00000565453 RASSF10A6NK89 507 aa20.01■□□□□ 0.79
CDH3-204ENST00000565453 TRAF5O00463 557 aa20.01■□□□□ 0.79
CDH3-204ENST00000565453 ZC3H12CQ9C0D7 883 aaKnown RBP20.01■□□□□ 0.79
CDH3-204ENST00000565453 SCN9AQ15858 1988 aa20.01■□□□□ 0.79
CDH3-204ENST00000565453 VEGFBP49765 207 aa20■□□□□ 0.79
CDH3-204ENST00000565453 MICALL2Q8IY33 904 aa20■□□□□ 0.79
CDH3-204ENST00000565453 ZC3H15Q8WU90 426 aaKnown RBP20■□□□□ 0.79
CDH3-204ENST00000565453 BSDC1Q9NW68 430 aaPredicted RBP20■□□□□ 0.79
CDH3-204ENST00000565453 CSF1RP07333 972 aa19.99■□□□□ 0.79
CDH3-204ENST00000565453 RPS12P25398 132 aaKnown RBP19.99■□□□□ 0.79
CDH3-204ENST00000565453 CST9Q5W186 159 aa19.99■□□□□ 0.79
CDH3-204ENST00000565453 MINPP1Q9UNW1 487 aa19.99■□□□□ 0.79
CDH3-204ENST00000565453 SPEF2Q9C093 1822 aa19.99■□□□□ 0.79
CDH3-204ENST00000565453 TRPM7Q96QT4 1865 aa19.99■□□□□ 0.79
CDH3-204ENST00000565453 WTIPA6NIX2 430 aaPredicted RBP19.98■□□□□ 0.79
CDH3-204ENST00000565453 F6X3S4 739 aa19.98■□□□□ 0.79
CDH3-204ENST00000565453 H7C1D1 291 aa19.98■□□□□ 0.79
CDH3-204ENST00000565453 VIL1P09327 827 aaKnown RBP19.98■□□□□ 0.79
CDH3-204ENST00000565453 ATP2B4P23634 1241 aa19.98■□□□□ 0.79
CDH3-204ENST00000565453 BEND3Q5T5X7 828 aa19.98■□□□□ 0.79
CDH3-204ENST00000565453 COL13A1Q5TAT6 717 aaPredicted RBP19.98■□□□□ 0.79
CDH3-204ENST00000565453 ZNF609O15014 1411 aa19.97■□□□□ 0.79
CDH3-204ENST00000565453 DEFB115Q30KQ5 88 aa19.97■□□□□ 0.79
CDH3-204ENST00000565453 GLIS2Q9BZE0 524 aaPredicted RBP19.97■□□□□ 0.79
CDH3-204ENST00000565453 PSME4Q14997 1843 aa19.97■□□□□ 0.79
CDH3-204ENST00000565453 EGFRP00533 1210 aa19.96■□□□□ 0.79
CDH3-204ENST00000565453 ITGA6P23229 1130 aa19.96■□□□□ 0.79
CDH3-204ENST00000565453 FAM161AQ3B820 660 aa19.96■□□□□ 0.79
CDH3-204ENST00000565453 SAMD7Q7Z3H4 446 aa19.96■□□□□ 0.79
CDH3-204ENST00000565453 ABT1Q9ULW3 272 aaKnown RBP19.96■□□□□ 0.79
CDH3-204ENST00000565453 MED23Q9ULK4 1368 aa19.95■□□□□ 0.79
CDH3-204ENST00000565453 G3V3G9 751 aa19.94■□□□□ 0.78
CDH3-204ENST00000565453 IGHMBP2P38935 993 aaKnown RBP19.94■□□□□ 0.78
CDH3-204ENST00000565453 CCT4P50991 539 aaKnown RBP19.94■□□□□ 0.78
CDH3-204ENST00000565453 FOXO4P98177 505 aa19.94■□□□□ 0.78
CDH3-204ENST00000565453 TBC1D10BQ4KMP7 808 aaPredicted RBP19.94■□□□□ 0.78
CDH3-204ENST00000565453 DCAF8Q5TAQ9 597 aa19.94■□□□□ 0.78
CDH3-204ENST00000565453 TLL2Q9Y6L7 1015 aa19.94■□□□□ 0.78
CDH3-204ENST00000565453 THSD7BQ9C0I4 1608 aa19.94■□□□□ 0.78
CDH3-204ENST00000565453 RSBN1LQ6PCB5 846 aaPredicted RBP19.93■□□□□ 0.78
CDH3-204ENST00000565453 CDC37L1Q7L3B6 337 aa19.93■□□□□ 0.78
CDH3-204ENST00000565453 PODNQ7Z5L7 613 aa19.93■□□□□ 0.78
CDH3-204ENST00000565453 WDR33Q9C0J8 1336 aaKnown RBP19.93■□□□□ 0.78
CDH3-204ENST00000565453 CELF2O95319 508 aaKnown RBP19.92■□□□□ 0.78
CDH3-204ENST00000565453 GMLQ99445 158 aa19.92■□□□□ 0.78
CDH3-204ENST00000565453 LEMD3Q9Y2U8 911 aa19.92■□□□□ 0.78
CDH3-204ENST00000565453 ZNF646O15015 1829 aaPredicted RBP19.92■□□□□ 0.78
CDH3-204ENST00000565453 FOXN1O15353 648 aa19.91■□□□□ 0.78
CDH3-204ENST00000565453 ZNF280AP59817 542 aaPredicted RBP19.91■□□□□ 0.78
CDH3-204ENST00000565453 USP48Q86UV5 1035 aa19.91■□□□□ 0.78
CDH3-204ENST00000565453 AGBL3Q8NEM8 1001 aa19.91■□□□□ 0.78
CDH3-204ENST00000565453 WBP1LQ9NX94 342 aa19.91■□□□□ 0.78
CDH3-204ENST00000565453 PCNTO95613 3336 aa19.91■□□□□ 0.78
CDH3-204ENST00000565453 GRM8O00222 908 aa19.9■□□□□ 0.78
CDH3-204ENST00000565453 KIF4BQ2VIQ3 1234 aa19.9■□□□□ 0.78
CDH3-204ENST00000565453 EPHA10Q5JZY3 1008 aa19.9■□□□□ 0.78
CDH3-204ENST00000565453 RBM26Q5T8P6 1007 aaKnown RBP19.9■□□□□ 0.78
CDH3-204ENST00000565453 SAPCD2Q86UD0 394 aa19.9■□□□□ 0.78
CDH3-204ENST00000565453 TXNRD3Q86VQ6 643 aa19.9■□□□□ 0.78
CDH3-204ENST00000565453 MPHOSPH8Q99549 860 aa19.9■□□□□ 0.78
CDH3-204ENST00000565453 ANKRD2Q9GZV1 360 aa19.9■□□□□ 0.78
CDH3-204ENST00000565453 ANKRD18BA2A2Z9 1011 aa19.89■□□□□ 0.77
CDH3-204ENST00000565453 ZNF804BA4D1E1 1349 aa19.89■□□□□ 0.77
CDH3-204ENST00000565453 USP17L3A6NCW0 530 aa19.89■□□□□ 0.77
CDH3-204ENST00000565453 USP17L4A6NCW7 530 aa19.89■□□□□ 0.77
CDH3-204ENST00000565453 E9PSI1 815 aa19.89■□□□□ 0.77
CDH3-204ENST00000565453 ALDH1L1O75891 902 aa19.89■□□□□ 0.77
CDH3-204ENST00000565453 DLK2Q6UY11 383 aa19.89■□□□□ 0.77
CDH3-204ENST00000565453 USP17L1Q7RTZ2 530 aa19.89■□□□□ 0.77
CDH3-204ENST00000565453 MRPL50Q8N5N7 158 aaKnown RBP19.89■□□□□ 0.77
CDH3-204ENST00000565453 CAPNS2Q96L46 248 aa19.89■□□□□ 0.77
CDH3-204ENST00000565453 KLRK1P26718 216 aa19.88■□□□□ 0.77
CDH3-204ENST00000565453 CHRNDQ07001 517 aa19.88■□□□□ 0.77
CDH3-204ENST00000565453 SLFN5Q08AF3 891 aa19.88■□□□□ 0.77
CDH3-204ENST00000565453 CYP4F22Q6NT55 531 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms