RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 ATP6V0A2Q9Y487 856 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 ATP2C2O75185 946 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 GJB2P29033 226 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 ANKRD24Q8TF21 1146 aa5.76□□□□□ -1.49
SMG1-211ENST00000565324 PUF60Q9UHX1 559 aaKnown RBP5.76□□□□□ -1.49
SMG1-211ENST00000565324 TBCAO75347 108 aaKnown RBP5.75□□□□□ -1.49
SMG1-211ENST00000565324 KRBA2Q6ZNG9 492 aa5.75□□□□□ -1.49
SMG1-211ENST00000565324 DNAI1Q9UI46 699 aa5.75□□□□□ -1.49
SMG1-211ENST00000565324 CCDC141Q6ZP82 1450 aa5.75□□□□□ -1.49
SMG1-211ENST00000565324 NDUFAB1O14561 156 aa5.75□□□□□ -1.49
SMG1-211ENST00000565324 CALCOCO2Q13137 446 aa5.75□□□□□ -1.49
SMG1-211ENST00000565324 SRGAP1Q7Z6B7 1085 aa5.75□□□□□ -1.49
SMG1-211ENST00000565324 ANKRD50Q9ULJ7 1429 aa5.75□□□□□ -1.49
SMG1-211ENST00000565324 SLC8A1P32418 973 aa5.75□□□□□ -1.49
SMG1-211ENST00000565324 LARSQ9P2J5 1176 aaKnown RBP5.75□□□□□ -1.49
SMG1-211ENST00000565324 EVI5LQ96CN4 794 aa5.75□□□□□ -1.49
SMG1-211ENST00000565324 BCAR3O75815 825 aa5.75□□□□□ -1.49
SMG1-211ENST00000565324 PDE4BQ07343 736 aa5.75□□□□□ -1.49
SMG1-211ENST00000565324 NUTM1Q86Y26 1132 aa5.75□□□□□ -1.49
SMG1-211ENST00000565324 ZFP91Q96JP5 570 aaPredicted RBP5.75□□□□□ -1.49
SMG1-211ENST00000565324 MROH2BQ7Z745 1585 aa5.75□□□□□ -1.49
SMG1-211ENST00000565324 ZNF213O14771 459 aa5.75□□□□□ -1.49
SMG1-211ENST00000565324 PRPF40BQ6NWY9 871 aaKnown RBP5.75□□□□□ -1.49
SMG1-211ENST00000565324 ZSCAN29Q8IWY8 852 aaPredicted RBP5.75□□□□□ -1.49
SMG1-211ENST00000565324 EIF2AQ9BY44 585 aaKnown RBP5.75□□□□□ -1.49
SMG1-211ENST00000565324 PTPRCP08575 1304 aa5.75□□□□□ -1.49
SMG1-211ENST00000565324 TRIM14Q14142 442 aa5.75□□□□□ -1.49
SMG1-211ENST00000565324 DDX27Q96GQ7 796 aaKnown RBP5.75□□□□□ -1.49
SMG1-211ENST00000565324 CAPZA3Q96KX2 299 aa5.75□□□□□ -1.49
SMG1-211ENST00000565324 VWA3BQ502W6 1294 aa5.75□□□□□ -1.49
SMG1-211ENST00000565324 TBC1D2Q9BYX2 928 aa5.75□□□□□ -1.49
SMG1-211ENST00000565324 GOLGA8AA7E2F4 631 aa5.75□□□□□ -1.49
SMG1-211ENST00000565324 HAUS8Q9BT25 410 aa5.75□□□□□ -1.49
SMG1-211ENST00000565324 MRVI1Q9Y6F6 885 aa5.75□□□□□ -1.49
SMG1-211ENST00000565324 RAD50Q92878 1312 aa5.75□□□□□ -1.49
SMG1-211ENST00000565324 HCLS1P14317 486 aaPredicted RBP5.74□□□□□ -1.49
SMG1-211ENST00000565324 PPP1R7Q15435 360 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 UBLCP1Q8WVY7 318 aaPredicted RBP5.74□□□□□ -1.49
SMG1-211ENST00000565324 ARHGEF2Q92974 986 aaKnown RBP5.74□□□□□ -1.49
SMG1-211ENST00000565324 I3L4J1 428 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 POLR3DP05423 398 aaPredicted RBP5.74□□□□□ -1.49
SMG1-211ENST00000565324 IFIT1P09914 478 aaKnown RBP5.74□□□□□ -1.49
SMG1-211ENST00000565324 ZSCAN22P10073 491 aaPredicted RBP5.74□□□□□ -1.49
SMG1-211ENST00000565324 IARSP41252 1262 aaKnown RBP5.74□□□□□ -1.49
SMG1-211ENST00000565324 NLRP5P59047 1200 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.74□□□□□ -1.49
SMG1-211ENST00000565324 ERO1AQ96HE7 468 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 RBM27Q9P2N5 1060 aaKnown RBP5.74□□□□□ -1.49
SMG1-211ENST00000565324 UTP11Q9Y3A2 253 aaKnown RBP5.74□□□□□ -1.49
SMG1-211ENST00000565324 TTC36A6NLP5 189 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 MRPS27Q92552 414 aaKnown RBP5.74□□□□□ -1.49
SMG1-211ENST00000565324 SPATS2LQ9NUQ6 558 aaKnown RBP5.74□□□□□ -1.49
SMG1-211ENST00000565324 LRPPRCP42704 1394 aaKnown RBP5.74□□□□□ -1.49
SMG1-211ENST00000565324 RAB11FIP4Q86YS3 637 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 IFT81Q8WYA0 676 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 STARD3NLO95772 234 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 IFT20Q8IY31 132 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 RPGRIP1Q96KN7 1286 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 NLRP6P59044 892 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 ZC4H2Q9NQZ6 224 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 CAMSAP2Q08AD1 1489 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 BTBD11A6QL63 1104 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 C11orf95C9JLR9 678 aaPredicted RBP5.74□□□□□ -1.49
SMG1-211ENST00000565324 METAP2P50579 478 aaKnown RBP eCLIP5.74□□□□□ -1.49
SMG1-211ENST00000565324 ATP2A3Q93084 1043 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 CFAP65Q6ZU64 1925 aaKnown RBP5.74□□□□□ -1.49
SMG1-211ENST00000565324 PDE1CQ14123 709 aaPredicted RBP5.74□□□□□ -1.49
SMG1-211ENST00000565324 BRAPQ7Z569 592 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 FAM169AQ9Y6X4 670 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 BIN1O00499 593 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 HIP1RO75146 1068 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 PDCD2Q16342 344 aaPredicted RBP5.74□□□□□ -1.49
SMG1-211ENST00000565324 SEL1L2Q5TEA6 688 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 CCDC170Q8IYT3 715 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 KCNK9Q9NPC2 374 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 GOLGA8QA0A0J9YX86 632 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 GOLGA8OA6NCC3 632 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 GOLGA8NF8WBI6 632 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 IFIT3O14879 490 aaKnown RBP5.74□□□□□ -1.49
SMG1-211ENST00000565324 PAK2Q13177 524 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 ABTB2Q8N961 1025 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 ZSWIM4Q9H7M6 989 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 IMPACTQ9P2X3 320 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 RTL1A6NKG5 1358 aa5.74□□□□□ -1.49
SMG1-211ENST00000565324 SH3BP5O60239 455 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 SLC5A1P13866 664 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 SSFA2P28290 1259 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 CCDC82Q8N4S0 544 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 UBL4BQ8N7F7 174 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 DUSP27Q5VZP5 1158 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 PHLDB3Q6NSJ2 640 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 TMEM87AQ8NBN3 555 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 TMX1Q9H3N1 280 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 CACYBPQ9HB71 228 aaKnown RBP5.73□□□□□ -1.49
SMG1-211ENST00000565324 GOLGA6CA6NDK9 693 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 MINDY4BA8MYZ0 360 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 HMGB3O15347 200 aaKnown RBP5.73□□□□□ -1.49
SMG1-211ENST00000565324 CRCPO75575 148 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 GOLGA6DP0CG33 693 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 GCKP35557 465 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 219.1 ms