RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 COL4A1P02462 1669 aa9.26□□□□□ -0.93
GINS3-205ENST00000564814 SNED1Q8TER0 1413 aa9.26□□□□□ -0.93
GINS3-205ENST00000564814 SURF6O75683 361 aaKnown RBP9.26□□□□□ -0.93
GINS3-205ENST00000564814 BBOX1O75936 387 aa9.26□□□□□ -0.93
GINS3-205ENST00000564814 ALDH1B1P30837 517 aa9.26□□□□□ -0.93
GINS3-205ENST00000564814 RTL5Q5HYW3 569 aaPredicted RBP9.26□□□□□ -0.93
GINS3-205ENST00000564814 C3orf67Q6ZVT6 689 aa9.26□□□□□ -0.93
GINS3-205ENST00000564814 RHPN1Q8TCX5 695 aa9.26□□□□□ -0.93
GINS3-205ENST00000564814 JARID2Q92833 1246 aaPredicted RBP9.26□□□□□ -0.93
GINS3-205ENST00000564814 MASTLQ96GX5 879 aa9.26□□□□□ -0.93
GINS3-205ENST00000564814 LRRCC1Q9C099 1032 aa9.26□□□□□ -0.93
GINS3-205ENST00000564814 OSBPL3Q9H4L5 887 aa9.26□□□□□ -0.93
GINS3-205ENST00000564814 CD2APQ9Y5K6 639 aa9.26□□□□□ -0.93
GINS3-205ENST00000564814 AOX1Q06278 1338 aa9.26□□□□□ -0.93
GINS3-205ENST00000564814 MROH5Q6ZUA9 1318 aa9.26□□□□□ -0.93
GINS3-205ENST00000564814 SPEF2Q9C093 1822 aa9.26□□□□□ -0.93
GINS3-205ENST00000564814 TAF1P21675 1872 aa9.25□□□□□ -0.93
GINS3-205ENST00000564814 ZNF609O15014 1411 aa9.25□□□□□ -0.93
GINS3-205ENST00000564814 NPHP1O15259 732 aa9.25□□□□□ -0.93
GINS3-205ENST00000564814 SASH1O94885 1247 aa9.25□□□□□ -0.93
GINS3-205ENST00000564814 IGHMBP2P38935 993 aaKnown RBP9.25□□□□□ -0.93
GINS3-205ENST00000564814 RPS8P62241 208 aaKnown RBP9.25□□□□□ -0.93
GINS3-205ENST00000564814 G3BP1Q13283 466 aaKnown RBP eCLIP9.25□□□□□ -0.93
GINS3-205ENST00000564814 GRIPAP1Q4V328 841 aa9.25□□□□□ -0.93
GINS3-205ENST00000564814 LDHAL6AQ6ZMR3 332 aa9.25□□□□□ -0.93
GINS3-205ENST00000564814 DDX46Q7L014 1031 aaKnown RBP9.25□□□□□ -0.93
GINS3-205ENST00000564814 CHD1LQ86WJ1 897 aa9.25□□□□□ -0.93
GINS3-205ENST00000564814 ANKRD18AQ8IVF6 992 aa9.25□□□□□ -0.93
GINS3-205ENST00000564814 RBM17Q96I25 401 aaKnown RBP9.25□□□□□ -0.93
GINS3-205ENST00000564814 PA2G4Q9UQ80 394 aaKnown RBP9.25□□□□□ -0.93
GINS3-205ENST00000564814 ARFGEF1Q9Y6D6 1849 aa9.24□□□□□ -0.93
GINS3-205ENST00000564814 FAM177BA6PVY3 158 aa9.24□□□□□ -0.93
GINS3-205ENST00000564814 FGFR2P21802 821 aa9.24□□□□□ -0.93
GINS3-205ENST00000564814 CC2D2BQ6DHV5 1058 aa9.24□□□□□ -0.93
GINS3-205ENST00000564814 C15orf52Q6ZUT6 534 aaKnown RBP9.24□□□□□ -0.93
GINS3-205ENST00000564814 SEC31BQ9NQW1 1179 aa9.24□□□□□ -0.93
GINS3-205ENST00000564814 PODXL2Q9NZ53 605 aa9.24□□□□□ -0.93
GINS3-205ENST00000564814 STAP2Q9UGK3 403 aa9.24□□□□□ -0.93
GINS3-205ENST00000564814 EXOC6BQ9Y2D4 811 aa9.24□□□□□ -0.93
GINS3-205ENST00000564814 U3KPZ7 1027 aaPredicted RBP9.24□□□□□ -0.93
GINS3-205ENST00000564814 PDE8BO95263 885 aa9.23□□□□□ -0.93
GINS3-205ENST00000564814 YBX3P16989 372 aaKnown RBP eCLIP9.23□□□□□ -0.93
GINS3-205ENST00000564814 UBE4AQ14139 1066 aa9.23□□□□□ -0.93
GINS3-205ENST00000564814 LRRC24Q50LG9 513 aa9.23□□□□□ -0.93
GINS3-205ENST00000564814 TAF7LQ5H9L4 462 aa9.23□□□□□ -0.93
GINS3-205ENST00000564814 TICAM2Q86XR7 235 aa9.23□□□□□ -0.93
GINS3-205ENST00000564814 CLASRPQ8N2M8 674 aaKnown RBP9.23□□□□□ -0.93
GINS3-205ENST00000564814 RPGRQ92834 1020 aaKnown RBP9.23□□□□□ -0.93
GINS3-205ENST00000564814 CELF1Q92879 486 aaKnown RBP9.23□□□□□ -0.93
GINS3-205ENST00000564814 CNKSR1Q969H4 720 aa9.23□□□□□ -0.93
GINS3-205ENST00000564814 ZNF512BQ96KM6 892 aaPredicted RBP9.23□□□□□ -0.93
GINS3-205ENST00000564814 MPHOSPH8Q99549 860 aa9.23□□□□□ -0.93
GINS3-205ENST00000564814 CEP126Q9P2H0 1117 aa9.23□□□□□ -0.93
GINS3-205ENST00000564814 AKAP2Q9Y2D5 859 aa9.23□□□□□ -0.93
GINS3-205ENST00000564814 TTC41PQ6P2S7 1318 aa9.23□□□□□ -0.93
GINS3-205ENST00000564814 SLX4Q8IY92 1834 aa9.22□□□□□ -0.93
GINS3-205ENST00000564814 H0YIN7 160 aa9.22□□□□□ -0.93
GINS3-205ENST00000564814 IGSF3O75054 1194 aa9.22□□□□□ -0.93
GINS3-205ENST00000564814 KCNA3P22001 575 aa9.22□□□□□ -0.93
GINS3-205ENST00000564814 TNNI3KQ59H18 835 aa9.22□□□□□ -0.93
GINS3-205ENST00000564814 ANKRD45Q5TZF3 282 aa9.22□□□□□ -0.93
GINS3-205ENST00000564814 SP8Q8IXZ3 490 aa9.22□□□□□ -0.93
GINS3-205ENST00000564814 KLHDC4Q8TBB5 520 aa9.22□□□□□ -0.93
GINS3-205ENST00000564814 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.22□□□□□ -0.93
GINS3-205ENST00000564814 C7orf43Q8WVR3 580 aa9.22□□□□□ -0.93
GINS3-205ENST00000564814 PUS3Q9BZE2 481 aaKnown RBP9.22□□□□□ -0.93
GINS3-205ENST00000564814 ANKRD2Q9GZV1 360 aa9.22□□□□□ -0.93
GINS3-205ENST00000564814 WWC3Q9ULE0 1092 aa9.22□□□□□ -0.93
GINS3-205ENST00000564814 MINPP1Q9UNW1 487 aa9.22□□□□□ -0.93
GINS3-205ENST00000564814 LEMD3Q9Y2U8 911 aa9.22□□□□□ -0.93
GINS3-205ENST00000564814 CHMP3Q9Y3E7 222 aa9.22□□□□□ -0.93
GINS3-205ENST00000564814 ATP6V0A2Q9Y487 856 aa9.22□□□□□ -0.93
GINS3-205ENST00000564814 FPGT-TNNI3KV9GXZ4 949 aa9.22□□□□□ -0.93
GINS3-205ENST00000564814 IRS2Q9Y4H2 1338 aa9.22□□□□□ -0.93
GINS3-205ENST00000564814 DUOX1Q9NRD9 1551 aa9.21□□□□□ -0.93
GINS3-205ENST00000564814 GRIN3BO60391 1043 aa9.21□□□□□ -0.94
GINS3-205ENST00000564814 CHRNDQ07001 517 aa9.21□□□□□ -0.94
GINS3-205ENST00000564814 PUM3Q15397 648 aaKnown RBP9.21□□□□□ -0.94
GINS3-205ENST00000564814 LPIN2Q92539 896 aa9.21□□□□□ -0.94
GINS3-205ENST00000564814 EAF2Q96CJ1 260 aaPredicted RBP9.21□□□□□ -0.94
GINS3-205ENST00000564814 ZNF594Q96JF6 807 aaPredicted RBP9.21□□□□□ -0.94
GINS3-205ENST00000564814 RTFDC1Q9BY42 306 aaPredicted RBP9.21□□□□□ -0.94
GINS3-205ENST00000564814 CNNM1Q9NRU3 951 aa9.21□□□□□ -0.94
GINS3-205ENST00000564814 ZNF804BA4D1E1 1349 aa9.21□□□□□ -0.94
GINS3-205ENST00000564814 XDHP47989 1333 aa9.21□□□□□ -0.94
GINS3-205ENST00000564814 CACNA1SQ13698 1873 aa9.21□□□□□ -0.94
GINS3-205ENST00000564814 FER1L6Q2WGJ9 1857 aa9.21□□□□□ -0.94
GINS3-205ENST00000564814 GOLGB1Q14789 3259 aaKnown RBP9.2□□□□□ -0.94
GINS3-205ENST00000564814 PDE4AP27815 886 aa9.2□□□□□ -0.94
GINS3-205ENST00000564814 TFCP2Q12800 502 aa9.2□□□□□ -0.94
GINS3-205ENST00000564814 OS9Q13438 667 aaPredicted RBP9.2□□□□□ -0.94
GINS3-205ENST00000564814 METTL24Q5JXM2 366 aa9.2□□□□□ -0.94
GINS3-205ENST00000564814 SOGA3Q5TF21 947 aa9.2□□□□□ -0.94
GINS3-205ENST00000564814 C2CD5Q86YS7 1000 aa9.2□□□□□ -0.94
GINS3-205ENST00000564814 PLEKHM2Q8IWE5 1019 aa9.2□□□□□ -0.94
GINS3-205ENST00000564814 CCDC24Q8N4L8 307 aa9.2□□□□□ -0.94
GINS3-205ENST00000564814 LNPKQ9C0E8 428 aa9.2□□□□□ -0.94
GINS3-205ENST00000564814 SIL1Q9H173 461 aa9.2□□□□□ -0.94
GINS3-205ENST00000564814 VPS33BQ9H267 617 aa9.2□□□□□ -0.94
GINS3-205ENST00000564814 ZBTB47Q9UFB7 747 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms