RNA–Protein interactions for RNA: ENST00000564440.5

PKM-212, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 3,016 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-212ENST00000564440 FOXD4L5Q5VV16 416 aaPredicted RBP11.16□□□□□ -0.62
PKM-212ENST00000564440 FOXD4L4Q8WXT5 416 aaPredicted RBP11.16□□□□□ -0.62
PKM-212ENST00000564440 TRMT112Q9UI30 125 aaKnown RBP11.16□□□□□ -0.62
PKM-212ENST00000564440 STARD3NLO95772 234 aa11.15□□□□□ -0.62
PKM-212ENST00000564440 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.15□□□□□ -0.62
PKM-212ENST00000564440 SSH3Q8TE77 659 aa11.15□□□□□ -0.62
PKM-212ENST00000564440 SEC31BQ9NQW1 1179 aa11.15□□□□□ -0.62
PKM-212ENST00000564440 TAF5LO75529 589 aa11.15□□□□□ -0.62
PKM-212ENST00000564440 CLEC4GQ6UXB4 293 aa11.15□□□□□ -0.62
PKM-212ENST00000564440 PLBD2Q8NHP8 589 aa11.15□□□□□ -0.62
PKM-212ENST00000564440 STK32BQ9NY57 414 aa11.15□□□□□ -0.62
PKM-212ENST00000564440 FOXD4L6Q3SYB3 417 aaPredicted RBP11.14□□□□□ -0.63
PKM-212ENST00000564440 FOXD4L3Q6VB84 417 aaPredicted RBP11.14□□□□□ -0.63
PKM-212ENST00000564440 TCEANC2Q96MN5 208 aa11.14□□□□□ -0.63
PKM-212ENST00000564440 DBNDD2Q9BQY9 259 aa11.14□□□□□ -0.63
PKM-212ENST00000564440 UPF3BQ9BZI7 483 aaKnown RBP11.14□□□□□ -0.63
PKM-212ENST00000564440 ANO2Q9NQ90 1003 aa11.14□□□□□ -0.63
PKM-212ENST00000564440 LTBP1Q14766 1721 aa11.14□□□□□ -0.63
PKM-212ENST00000564440 UBN2Q6ZU65 1347 aa11.14□□□□□ -0.63
PKM-212ENST00000564440 USP42Q9H9J4 1324 aaKnown RBP11.14□□□□□ -0.63
PKM-212ENST00000564440 G3BP1Q13283 466 aaKnown RBP eCLIP11.14□□□□□ -0.632e-10■■■□□ 14.9
PKM-212ENST00000564440 DEFB132Q7Z7B7 95 aa11.14□□□□□ -0.63
PKM-212ENST00000564440 SEC62Q99442 399 aaKnown RBP11.14□□□□□ -0.63
PKM-212ENST00000564440 GREM2Q9H772 168 aa11.14□□□□□ -0.63
PKM-212ENST00000564440 GNPATO15228 680 aa11.14□□□□□ -0.63
PKM-212ENST00000564440 BAG4O95429 457 aaKnown RBP11.14□□□□□ -0.63
PKM-212ENST00000564440 CLEC17AQ6ZS10 378 aa11.14□□□□□ -0.63
PKM-212ENST00000564440 C3orf67Q6ZVT6 689 aa11.14□□□□□ -0.63
PKM-212ENST00000564440 DDX46Q7L014 1031 aaKnown RBP11.14□□□□□ -0.63
PKM-212ENST00000564440 CWC25Q9NXE8 425 aaPredicted RBP11.14□□□□□ -0.63
PKM-212ENST00000564440 IFIT2P09913 472 aaKnown RBP11.13□□□□□ -0.63
PKM-212ENST00000564440 NCLP19338 710 aaKnown RBP11.13□□□□□ -0.63
PKM-212ENST00000564440 PTPN12Q05209 780 aaKnown RBP11.13□□□□□ -0.63
PKM-212ENST00000564440 KIF6Q6ZMV9 814 aa11.13□□□□□ -0.63
PKM-212ENST00000564440 STK11IPQ8N1F8 1099 aa11.13□□□□□ -0.63
PKM-212ENST00000564440 PALD1Q9ULE6 856 aa11.13□□□□□ -0.63
PKM-212ENST00000564440 NPHP1O15259 732 aa11.13□□□□□ -0.63
PKM-212ENST00000564440 ADORA1P30542 326 aa11.13□□□□□ -0.63
PKM-212ENST00000564440 TERF1P54274 439 aa11.13□□□□□ -0.63
PKM-212ENST00000564440 CCDC129Q6ZRS4 1044 aa11.13□□□□□ -0.63
PKM-212ENST00000564440 FAM227BQ96M60 508 aa11.13□□□□□ -0.63
PKM-212ENST00000564440 NARFQ9UHQ1 456 aa11.13□□□□□ -0.63
PKM-212ENST00000564440 NIP7Q9Y221 180 aaKnown RBP eCLIP11.13□□□□□ -0.63
PKM-212ENST00000564440 TRIM28Q13263 835 aaKnown RBP11.12□□□□□ -0.63
PKM-212ENST00000564440 TAF7LQ5H9L4 462 aa11.12□□□□□ -0.63
PKM-212ENST00000564440 SUSD4Q5VX71 490 aa11.12□□□□□ -0.63
PKM-212ENST00000564440 CHMP4BQ9H444 224 aaKnown RBP11.12□□□□□ -0.63
PKM-212ENST00000564440 FOXO4P98177 505 aa11.11□□□□□ -0.63
PKM-212ENST00000564440 HS1BP3Q53T59 392 aa11.11□□□□□ -0.63
PKM-212ENST00000564440 TAF6LQ9Y6J9 622 aa11.11□□□□□ -0.63
PKM-212ENST00000564440 TNRC6CQ9HCJ0 1690 aaKnown RBP11.11□□□□□ -0.63
PKM-212ENST00000564440 TM4SF1P30408 202 aa11.11□□□□□ -0.63
PKM-212ENST00000564440 RBM10P98175 930 aaKnown RBP11.11□□□□□ -0.63
PKM-212ENST00000564440 MCTP1Q6DN14 999 aa11.11□□□□□ -0.63
PKM-212ENST00000564440 CLASRPQ8N2M8 674 aaKnown RBP11.11□□□□□ -0.63
PKM-212ENST00000564440 MTFR1LQ9H019 292 aa11.11□□□□□ -0.63
PKM-212ENST00000564440 DBNLQ9UJU6 430 aaKnown RBP11.11□□□□□ -0.63
PKM-212ENST00000564440 DICER1Q9UPY3 1922 aaKnown RBP11.11□□□□□ -0.63
PKM-212ENST00000564440 A0A0G2JLW4 131 aa11.11□□□□□ -0.63
PKM-212ENST00000564440 GTF2E1P29083 439 aaPredicted RBP11.11□□□□□ -0.63
PKM-212ENST00000564440 ZNF445P59923 1031 aa11.11□□□□□ -0.63
PKM-212ENST00000564440 NUCB2P80303 420 aa11.11□□□□□ -0.63
PKM-212ENST00000564440 POLA2Q14181 598 aa11.11□□□□□ -0.63
PKM-212ENST00000564440 USPL1Q5W0Q7 1092 aa11.11□□□□□ -0.63
PKM-212ENST00000564440 MSL1Q68DK7 614 aa11.11□□□□□ -0.63
PKM-212ENST00000564440 R3HCC1Q9Y3T6 440 aaKnown RBP11.11□□□□□ -0.63
PKM-212ENST00000564440 FKBP4Q02790 459 aaKnown RBP eCLIP11.1□□□□□ -0.63
PKM-212ENST00000564440 TCIRG1Q13488 830 aa11.1□□□□□ -0.63
PKM-212ENST00000564440 CAVIN1Q6NZI2 390 aaKnown RBP11.1□□□□□ -0.63
PKM-212ENST00000564440 TAF1P21675 1872 aa11.1□□□□□ -0.63
PKM-212ENST00000564440 KLRG2A4D1S0 409 aaPredicted RBP11.1□□□□□ -0.63
PKM-212ENST00000564440 CAMTA2O94983 1202 aa11.1□□□□□ -0.63
PKM-212ENST00000564440 NLRP10Q86W26 655 aa11.1□□□□□ -0.63
PKM-212ENST00000564440 KIF1BPQ96EK5 621 aa11.1□□□□□ -0.63
PKM-212ENST00000564440 GPR101Q96P66 508 aaPredicted RBP11.1□□□□□ -0.63
PKM-212ENST00000564440 MAP7D2Q96T17 732 aa11.1□□□□□ -0.63
PKM-212ENST00000564440 FAM13BQ9NYF5 915 aa11.1□□□□□ -0.63
PKM-212ENST00000564440 IRS4O14654 1257 aaPredicted RBP11.09□□□□□ -0.63
PKM-212ENST00000564440 ALDH1L1O75891 902 aa11.09□□□□□ -0.63
PKM-212ENST00000564440 PTGER2P43116 358 aa11.09□□□□□ -0.63
PKM-212ENST00000564440 PI4K2BQ8TCG2 481 aa11.09□□□□□ -0.63
PKM-212ENST00000564440 NOL7Q9UMY1 257 aaKnown RBP11.09□□□□□ -0.63
PKM-212ENST00000564440 CDC45O75419 566 aa11.09□□□□□ -0.63
PKM-212ENST00000564440 CASP7P55210 303 aa11.09□□□□□ -0.63
PKM-212ENST00000564440 SCARF1Q14162 830 aa11.09□□□□□ -0.63
PKM-212ENST00000564440 CHMP4CQ96CF2 233 aa11.09□□□□□ -0.63
PKM-212ENST00000564440 PDGFDQ9GZP0 370 aaPredicted RBP11.09□□□□□ -0.63
PKM-212ENST00000564440 FER1L6Q2WGJ9 1857 aa11.09□□□□□ -0.63
PKM-212ENST00000564440 BRCA2P51587 3418 aa11.09□□□□□ -0.63
PKM-212ENST00000564440 SLC4A8Q2Y0W8 1093 aa11.09□□□□□ -0.63
PKM-212ENST00000564440 ZSCAN23Q3MJ62 389 aa11.09□□□□□ -0.63
PKM-212ENST00000564440 COL23A1Q86Y22 540 aaPredicted RBP11.09□□□□□ -0.63
PKM-212ENST00000564440 BCL2L12Q9HB09 334 aa11.09□□□□□ -0.63
PKM-212ENST00000564440 RTCBQ9Y3I0 505 aaKnown RBP11.09□□□□□ -0.63
PKM-212ENST00000564440 AK9Q5TCS8 1911 aa11.08□□□□□ -0.64
PKM-212ENST00000564440 ITGA6P23229 1130 aa11.08□□□□□ -0.64
PKM-212ENST00000564440 RABEP1Q15276 862 aa11.08□□□□□ -0.64
PKM-212ENST00000564440 ZNF646O15015 1829 aaPredicted RBP11.08□□□□□ -0.64
PKM-212ENST00000564440 PSME4Q14997 1843 aa11.08□□□□□ -0.64
PKM-212ENST00000564440 MAP3K15Q6ZN16 1313 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms