RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 GGA1Q9UJY5 639 aa35.77■■■■□ 3.32
NME3-203ENST00000563367 IQCA1LA6NCM1 817 aa35.76■■■■□ 3.32
NME3-203ENST00000563367 YDJCA8MPS7 323 aa35.76■■■■□ 3.32
NME3-203ENST00000563367 LMBR1LQ6UX01 489 aa35.76■■■■□ 3.32
NME3-203ENST00000563367 KAZALD1Q96I82 304 aa35.76■■■■□ 3.32
NME3-203ENST00000563367 SUCLG2Q96I99 432 aa35.76■■■■□ 3.32
NME3-203ENST00000563367 TAF1DQ9H5J8 278 aaPredicted RBP35.76■■■■□ 3.32
NME3-203ENST00000563367 HSPA6P17066 643 aa35.75■■■■□ 3.31
NME3-203ENST00000563367 IGHMBP2P38935 993 aaKnown RBP35.75■■■■□ 3.31
NME3-203ENST00000563367 FSTL1Q12841 308 aa35.75■■■■□ 3.31
NME3-203ENST00000563367 EYA3Q99504 573 aa35.75■■■■□ 3.31
NME3-203ENST00000563367 XDHP47989 1333 aa35.75■■■■□ 3.31
NME3-203ENST00000563367 ANKRD18BA2A2Z9 1011 aa35.74■■■■□ 3.31
NME3-203ENST00000563367 WTIPA6NIX2 430 aaPredicted RBP35.74■■■■□ 3.31
NME3-203ENST00000563367 POTEIP0CG38 1075 aa35.74■■■■□ 3.31
NME3-203ENST00000563367 POTEJP0CG39 1038 aa35.74■■■■□ 3.31
NME3-203ENST00000563367 SMC1BQ8NDV3 1235 aa35.74■■■■□ 3.31
NME3-203ENST00000563367 DBNDD1Q9H9R9 158 aa35.74■■■■□ 3.31
NME3-203ENST00000563367 HACL1Q9UJ83 578 aa35.74■■■■□ 3.31
NME3-203ENST00000563367 CHMP3Q9Y3E7 222 aa35.74■■■■□ 3.31
NME3-203ENST00000563367 ZBED9Q6R2W3 1325 aa35.74■■■■□ 3.31
NME3-203ENST00000563367 RAD17O75943 681 aa35.72■■■■□ 3.31
NME3-203ENST00000563367 SCN9AQ15858 1988 aa35.72■■■■□ 3.31
NME3-203ENST00000563367 SCNN1DP51172 638 aa35.71■■■■□ 3.31
NME3-203ENST00000563367 IFIT5Q13325 482 aaKnown RBP35.71■■■■□ 3.31
NME3-203ENST00000563367 DOK7Q18PE1 504 aa35.71■■■■□ 3.31
NME3-203ENST00000563367 MPHOSPH8Q99549 860 aa35.71■■■■□ 3.31
NME3-203ENST00000563367 ZC3H12CQ9C0D7 883 aaKnown RBP35.71■■■■□ 3.31
NME3-203ENST00000563367 USP44Q9H0E7 712 aa35.71■■■■□ 3.31
NME3-203ENST00000563367 A0A1B0GUL6 1792 aa35.71■■■■□ 3.31
NME3-203ENST00000563367 ATP2B4P23634 1241 aa35.7■■■■□ 3.31
NME3-203ENST00000563367 EPHX2P34913 555 aa35.7■■■■□ 3.31
NME3-203ENST00000563367 CIAPIN1Q6FI81 312 aa35.7■■■■□ 3.31
NME3-203ENST00000563367 API5Q9BZZ5 524 aaKnown RBP35.69■■■■□ 3.3
NME3-203ENST00000563367 ECE2O60344 883 aa35.68■■■■□ 3.3
NME3-203ENST00000563367 ADAMTSL1Q8N6G6 1762 aa35.67■■■■□ 3.3
NME3-203ENST00000563367 BCAR3O75815 825 aa35.67■■■■□ 3.3
NME3-203ENST00000563367 CCT4P50991 539 aaKnown RBP35.67■■■■□ 3.3
NME3-203ENST00000563367 ZNF594Q96JF6 807 aaPredicted RBP35.67■■■■□ 3.3
NME3-203ENST00000563367 KCNQ5Q9NR82 932 aa35.67■■■■□ 3.3
NME3-203ENST00000563367 EPS15P42566 896 aa35.66■■■■□ 3.3
NME3-203ENST00000563367 TNIP1Q15025 636 aa35.66■■■■□ 3.3
NME3-203ENST00000563367 CCDC57Q2TAC2 916 aa35.66■■■■□ 3.3
NME3-203ENST00000563367 BICC1Q9H694 974 aaKnown RBP35.66■■■■□ 3.3
NME3-203ENST00000563367 KIF16BQ96L93 1317 aa35.65■■■■□ 3.3
NME3-203ENST00000563367 EAPPQ56P03 285 aaPredicted RBP35.65■■■■□ 3.3
NME3-203ENST00000563367 LMOD1P29536 600 aaPredicted RBP35.64■■■■□ 3.3
NME3-203ENST00000563367 GMPSP49915 693 aaPredicted RBP35.64■■■■□ 3.3
NME3-203ENST00000563367 CHRNDQ07001 517 aa35.64■■■■□ 3.3
NME3-203ENST00000563367 CHADLQ6NUI6 762 aa35.64■■■■□ 3.3
NME3-203ENST00000563367 ANKRD44Q8N8A2 993 aa35.64■■■■□ 3.3
NME3-203ENST00000563367 ARHGAP45Q92619 1136 aa35.64■■■■□ 3.3
NME3-203ENST00000563367 CEP350Q5VT06 3117 aa35.64■■■■□ 3.3
NME3-203ENST00000563367 PSME4Q14997 1843 aa35.64■■■■□ 3.3
NME3-203ENST00000563367 RABL6Q3YEC7 729 aaPredicted RBP35.63■■■■□ 3.29
NME3-203ENST00000563367 LDHDQ86WU2 507 aa35.63■■■■□ 3.29
NME3-203ENST00000563367 ANKRD2Q9GZV1 360 aa35.63■■■■□ 3.29
NME3-203ENST00000563367 GPRC5DQ9NZD1 345 aa35.63■■■■□ 3.29
NME3-203ENST00000563367 PSMD14O00487 310 aa35.62■■■■□ 3.29
NME3-203ENST00000563367 PNMA8AQ86V59 439 aaPredicted RBP35.61■■■■□ 3.29
NME3-203ENST00000563367 LEMD3Q9Y2U8 911 aa35.61■■■■□ 3.29
NME3-203ENST00000563367 MED23Q9ULK4 1368 aa35.61■■■■□ 3.29
NME3-203ENST00000563367 G3V3G9 751 aa35.6■■■■□ 3.29
NME3-203ENST00000563367 TAF7LQ5H9L4 462 aa35.6■■■■□ 3.29
NME3-203ENST00000563367 DCAF8Q5TAQ9 597 aa35.6■■■■□ 3.29
NME3-203ENST00000563367 ZNF804BA4D1E1 1349 aa35.59■■■■□ 3.29
NME3-203ENST00000563367 APLP1P51693 650 aa35.59■■■■□ 3.29
NME3-203ENST00000563367 TXNRD3Q86VQ6 643 aa35.59■■■■□ 3.29
NME3-203ENST00000563367 HELBQ8NG08 1087 aaPredicted RBP35.59■■■■□ 3.29
NME3-203ENST00000563367 TNNQ9UQP3 1299 aa35.59■■■■□ 3.29
NME3-203ENST00000563367 ZBTB12Q9Y330 459 aaPredicted RBP35.59■■■■□ 3.29
NME3-203ENST00000563367 LDHAL6AQ6ZMR3 332 aa35.58■■■■□ 3.29
NME3-203ENST00000563367 FRAT1Q92837 279 aaPredicted RBP35.58■■■■□ 3.29
NME3-203ENST00000563367 TAF5LO75529 589 aa35.57■■■■□ 3.28
NME3-203ENST00000563367 KLRK1P26718 216 aa35.57■■■■□ 3.28
NME3-203ENST00000563367 CLEC11AQ9Y240 323 aa35.57■■■■□ 3.28
NME3-203ENST00000563367 SHTN1A0MZ66 631 aa35.56■■■■□ 3.28
NME3-203ENST00000563367 SNAP23O00161 211 aa35.56■■■■□ 3.28
NME3-203ENST00000563367 IPO8O15397 1037 aaKnown RBP35.56■■■■□ 3.28
NME3-203ENST00000563367 TRIM27P14373 513 aa35.56■■■■□ 3.28
NME3-203ENST00000563367 CNNM1Q9NRU3 951 aa35.56■■■■□ 3.28
NME3-203ENST00000563367 INTS3Q68E01 1043 aaKnown RBP35.55■■■■□ 3.28
NME3-203ENST00000563367 PUS3Q9BZE2 481 aaKnown RBP35.55■■■■□ 3.28
NME3-203ENST00000563367 HTRA3P83110 453 aa35.54■■■■□ 3.28
NME3-203ENST00000563367 ATF7IPQ6VMQ6 1270 aa35.54■■■■□ 3.28
NME3-203ENST00000563367 ADARB2Q9NS39 739 aaKnown RBP35.54■■■■□ 3.28
NME3-203ENST00000563367 CNOT7Q9UIV1 285 aaKnown RBP35.54■■■■□ 3.28
NME3-203ENST00000563367 ZNF646O15015 1829 aaPredicted RBP35.54■■■■□ 3.28
NME3-203ENST00000563367 VIL1P09327 827 aaKnown RBP35.53■■■■□ 3.28
NME3-203ENST00000563367 USP50Q70EL3 339 aaPredicted RBP35.53■■■■□ 3.28
NME3-203ENST00000563367 UBTFL1P0CB47 393 aaPredicted RBP35.52■■■■□ 3.28
NME3-203ENST00000563367 KCNJ4P48050 445 aa35.52■■■■□ 3.28
NME3-203ENST00000563367 PODNQ7Z5L7 613 aa35.52■■■■□ 3.28
NME3-203ENST00000563367 IRS2Q9Y4H2 1338 aa35.52■■■■□ 3.28
NME3-203ENST00000563367 MAP1SQ66K74 1059 aaPredicted RBP35.51■■■■□ 3.28
NME3-203ENST00000563367 DPF2Q92785 391 aa35.51■■■■□ 3.28
NME3-203ENST00000563367 MEIS3Q99687 375 aa35.51■■■■□ 3.28
NME3-203ENST00000563367 PLIN1O60240 522 aa35.5■■■■□ 3.27
NME3-203ENST00000563367 ITGBL1O95965 494 aaPredicted RBP35.5■■■■□ 3.27
NME3-203ENST00000563367 MICALL2Q8IY33 904 aa35.5■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms