RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 HSH2DQ96JZ2 352 aa7.81□□□□□ -1.16
CNOT1-205ENST00000563283 ANKIB1Q9P2G1 1089 aa7.81□□□□□ -1.16
CNOT1-205ENST00000563283 KLF15Q9UIH9 416 aa7.81□□□□□ -1.16
CNOT1-205ENST00000563283 CLTCQ00610 1675 aaKnown RBP7.81□□□□□ -1.16
CNOT1-205ENST00000563283 SHANK2Q9UPX8 1470 aa7.81□□□□□ -1.16
CNOT1-205ENST00000563283 NCOA1Q15788 1441 aa7.8□□□□□ -1.16
CNOT1-205ENST00000563283 IGFBP4P22692 258 aa7.8□□□□□ -1.16
CNOT1-205ENST00000563283 SNRPNP63162 240 aaKnown RBP7.8□□□□□ -1.16
CNOT1-205ENST00000563283 FAM50AQ14320 339 aaKnown RBP7.8□□□□□ -1.16
CNOT1-205ENST00000563283 FCHSD1Q86WN1 690 aa7.8□□□□□ -1.16
CNOT1-205ENST00000563283 ALDH16A1Q8IZ83 802 aa7.8□□□□□ -1.16
CNOT1-205ENST00000563283 HINFPQ9BQA5 517 aa7.8□□□□□ -1.16
CNOT1-205ENST00000563283 RRP7BPQ9NSQ0 103 aa7.8□□□□□ -1.16
CNOT1-205ENST00000563283 LMTK3Q96Q04 1460 aa7.8□□□□□ -1.16
CNOT1-205ENST00000563283 RNF17Q9BXT8 1623 aaKnown RBP7.79□□□□□ -1.16
CNOT1-205ENST00000563283 KIF3BO15066 747 aa7.79□□□□□ -1.16
CNOT1-205ENST00000563283 HOXB4P17483 251 aaPredicted RBP7.79□□□□□ -1.16
CNOT1-205ENST00000563283 GGT6Q6P531 493 aa7.79□□□□□ -1.16
CNOT1-205ENST00000563283 BTBD6Q96KE9 485 aa7.79□□□□□ -1.16
CNOT1-205ENST00000563283 SUSD3Q96L08 255 aa7.79□□□□□ -1.16
CNOT1-205ENST00000563283 MKL2Q9ULH7 1088 aa7.79□□□□□ -1.16
CNOT1-205ENST00000563283 PRR12Q9ULL5 1215 aa7.79□□□□□ -1.16
CNOT1-205ENST00000563283 ADGRL2O95490 1459 aa7.79□□□□□ -1.16
CNOT1-205ENST00000563283 MROH2AA6NES4 1674 aa7.79□□□□□ -1.16
CNOT1-205ENST00000563283 RRBP1Q9P2E9 1410 aaKnown RBP7.78□□□□□ -1.16
CNOT1-205ENST00000563283 AMPD1P23109 780 aa7.78□□□□□ -1.16
CNOT1-205ENST00000563283 TYRO3Q06418 890 aa7.78□□□□□ -1.16
CNOT1-205ENST00000563283 SFSWAPQ12872 951 aaKnown RBP7.78□□□□□ -1.16
CNOT1-205ENST00000563283 HIF1AQ16665 826 aa7.78□□□□□ -1.16
CNOT1-205ENST00000563283 ZNF280CQ8ND82 737 aa7.78□□□□□ -1.16
CNOT1-205ENST00000563283 RRAGCQ9HB90 399 aa7.78□□□□□ -1.16
CNOT1-205ENST00000563283 ZMYM3Q14202 1370 aa7.78□□□□□ -1.16
CNOT1-205ENST00000563283 KIF15Q9NS87 1388 aa7.78□□□□□ -1.16
CNOT1-205ENST00000563283 EIF2AK4Q9P2K8 1649 aaKnown RBP7.78□□□□□ -1.16
CNOT1-205ENST00000563283 DUOX2Q9NRD8 1548 aa7.78□□□□□ -1.16
CNOT1-205ENST00000563283 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.77□□□□□ -1.17
CNOT1-205ENST00000563283 LGR5O75473 907 aa7.77□□□□□ -1.17
CNOT1-205ENST00000563283 KCNQ4P56696 695 aa7.77□□□□□ -1.17
CNOT1-205ENST00000563283 PCBP4P57723 403 aaKnown RBP7.77□□□□□ -1.17
CNOT1-205ENST00000563283 RTN1Q16799 776 aa7.77□□□□□ -1.17
CNOT1-205ENST00000563283 DCAF5Q96JK2 942 aa7.77□□□□□ -1.17
CNOT1-205ENST00000563283 CEP63Q96MT8 703 aa7.77□□□□□ -1.17
CNOT1-205ENST00000563283 ZMYND15Q9H091 742 aa7.77□□□□□ -1.17
CNOT1-205ENST00000563283 BRD7Q9NPI1 651 aa7.77□□□□□ -1.17
CNOT1-205ENST00000563283 DEPDC5O75140 1603 aa7.77□□□□□ -1.17
CNOT1-205ENST00000563283 WEE1P30291 646 aa7.76□□□□□ -1.17
CNOT1-205ENST00000563283 DGKGP49619 791 aa7.76□□□□□ -1.17
CNOT1-205ENST00000563283 GRIN2CQ14957 1233 aa7.76□□□□□ -1.17
CNOT1-205ENST00000563283 LINC00114Q6XXX2 140 aa7.76□□□□□ -1.17
CNOT1-205ENST00000563283 CHSY3Q70JA7 882 aa7.76□□□□□ -1.17
CNOT1-205ENST00000563283 SYT9Q86SS6 491 aa7.76□□□□□ -1.17
CNOT1-205ENST00000563283 FAM200AQ8TCP9 573 aa7.76□□□□□ -1.17
CNOT1-205ENST00000563283 NGLY1Q96IV0 654 aa7.76□□□□□ -1.17
CNOT1-205ENST00000563283 MDFIQ99750 246 aa7.76□□□□□ -1.17
CNOT1-205ENST00000563283 VWDEQ8N2E2 1590 aa7.76□□□□□ -1.17
CNOT1-205ENST00000563283 CEP152O94986 1710 aa7.75□□□□□ -1.17
CNOT1-205ENST00000563283 ANKRD30AQ9BXX3 1397 aa7.75□□□□□ -1.17
CNOT1-205ENST00000563283 ABCC3O15438 1527 aa7.75□□□□□ -1.17
CNOT1-205ENST00000563283 FOXO3O43524 673 aa7.75□□□□□ -1.17
CNOT1-205ENST00000563283 SIN3BO75182 1162 aa7.75□□□□□ -1.17
CNOT1-205ENST00000563283 RFX1P22670 979 aa7.75□□□□□ -1.17
CNOT1-205ENST00000563283 HSPA2P54652 639 aa7.75□□□□□ -1.17
CNOT1-205ENST00000563283 CDCA8Q53HL2 280 aa7.75□□□□□ -1.17
CNOT1-205ENST00000563283 IER5Q5VY09 327 aa7.75□□□□□ -1.17
CNOT1-205ENST00000563283 SLC30A3Q99726 388 aa7.75□□□□□ -1.17
CNOT1-205ENST00000563283 KCNH4Q9UQ05 1017 aa7.75□□□□□ -1.17
CNOT1-205ENST00000563283 PREX1Q8TCU6 1659 aa7.75□□□□□ -1.17
CNOT1-205ENST00000563283 CNTLNQ9NXG0 1405 aa7.75□□□□□ -1.17
CNOT1-205ENST00000563283 KDM5DQ9BY66 1539 aa7.74□□□□□ -1.17
CNOT1-205ENST00000563283 SETD1BQ9UPS6 1966 aaKnown RBP7.74□□□□□ -1.17
CNOT1-205ENST00000563283 PIK3R2O00459 728 aa7.74□□□□□ -1.17
CNOT1-205ENST00000563283 IGHA1P01876 353 aa7.74□□□□□ -1.17
CNOT1-205ENST00000563283 ITGAEP38570 1179 aa7.74□□□□□ -1.17
CNOT1-205ENST00000563283 SPEM2Q0P670 501 aa7.74□□□□□ -1.17
CNOT1-205ENST00000563283 ELOAQ14241 798 aaKnown RBP7.74□□□□□ -1.17
CNOT1-205ENST00000563283 BTLAQ7Z6A9 289 aa7.74□□□□□ -1.17
CNOT1-205ENST00000563283 ALYREFQ86V81 257 aaKnown RBP7.74□□□□□ -1.17
CNOT1-205ENST00000563283 NOVA2Q9UNW9 492 aaKnown RBP7.74□□□□□ -1.17
CNOT1-205ENST00000563283 ERBINQ96RT1 1412 aa7.74□□□□□ -1.17
CNOT1-205ENST00000563283 STRCQ7RTU9 1775 aa7.74□□□□□ -1.17
CNOT1-205ENST00000563283 PRDM15P57071 1507 aaPredicted RBP7.73□□□□□ -1.17
CNOT1-205ENST00000563283 ROCK1Q13464 1354 aa7.73□□□□□ -1.17
CNOT1-205ENST00000563283 ELOA3CA0A087WX78 387 aaPredicted RBP7.73□□□□□ -1.17
CNOT1-205ENST00000563283 ELOA3DA6NLF2 546 aaPredicted RBP7.73□□□□□ -1.17
CNOT1-205ENST00000563283 ADARB2-AS1A8MUL3 147 aa7.73□□□□□ -1.17
CNOT1-205ENST00000563283 TGFBR3LH3BV60 316 aa7.73□□□□□ -1.17
CNOT1-205ENST00000563283 GNB5O14775 395 aa7.73□□□□□ -1.17
CNOT1-205ENST00000563283 ELOA3BQ3SY89 546 aa7.73□□□□□ -1.17
CNOT1-205ENST00000563283 ELOA3Q8NG57 546 aa7.73□□□□□ -1.17
CNOT1-205ENST00000563283 TNFRSF25Q93038 417 aa7.73□□□□□ -1.17
CNOT1-205ENST00000563283 CAMSAP1Q5T5Y3 1602 aa7.73□□□□□ -1.17
CNOT1-205ENST00000563283 WASHC2CQ9Y4E1 1318 aa7.73□□□□□ -1.17
CNOT1-205ENST00000563283 CFAP65Q6ZU64 1925 aaKnown RBP7.72□□□□□ -1.17
CNOT1-205ENST00000563283 NPATQ14207 1427 aa7.72□□□□□ -1.17
CNOT1-205ENST00000563283 COL8A1P27658 744 aa7.72□□□□□ -1.17
CNOT1-205ENST00000563283 SRPK2P78362 688 aaKnown RBP7.72□□□□□ -1.17
CNOT1-205ENST00000563283 NEUROD1Q13562 356 aa7.72□□□□□ -1.17
CNOT1-205ENST00000563283 SWI5Q1ZZU3 235 aa7.72□□□□□ -1.17
CNOT1-205ENST00000563283 PLA2G4EQ3MJ16 856 aa7.72□□□□□ -1.17
CNOT1-205ENST00000563283 GPAT2Q6NUI2 795 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms