RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 SIL1Q9H173 461 aa23.37■■□□□ 1.33
RAB40C-207ENST00000563109 FBXO3Q9UK99 471 aa23.37■■□□□ 1.33
RAB40C-207ENST00000563109 GRIN3BO60391 1043 aa23.36■■□□□ 1.33
RAB40C-207ENST00000563109 ANKRD2Q9GZV1 360 aa23.36■■□□□ 1.33
RAB40C-207ENST00000563109 PA2G4Q9UQ80 394 aaKnown RBP23.36■■□□□ 1.33
RAB40C-207ENST00000563109 EYA2O00167 538 aa23.35■■□□□ 1.33
RAB40C-207ENST00000563109 CIAO1O76071 339 aa23.35■■□□□ 1.33
RAB40C-207ENST00000563109 OLFM4Q6UX06 510 aa23.35■■□□□ 1.33
RAB40C-207ENST00000563109 DPP8Q6V1X1 898 aaPredicted RBP23.35■■□□□ 1.33
RAB40C-207ENST00000563109 ANKIB1Q9P2G1 1089 aa23.35■■□□□ 1.33
RAB40C-207ENST00000563109 MINPP1Q9UNW1 487 aa23.35■■□□□ 1.33
RAB40C-207ENST00000563109 LTBP1Q14766 1721 aa23.35■■□□□ 1.33
RAB40C-207ENST00000563109 XDHP47989 1333 aa23.34■■□□□ 1.33
RAB40C-207ENST00000563109 MROH5Q6ZUA9 1318 aa23.34■■□□□ 1.33
RAB40C-207ENST00000563109 OS9Q13438 667 aaPredicted RBP23.34■■□□□ 1.33
RAB40C-207ENST00000563109 METTL24Q5JXM2 366 aa23.34■■□□□ 1.33
RAB40C-207ENST00000563109 MPNDQ8N594 471 aa23.34■■□□□ 1.33
RAB40C-207ENST00000563109 PUS3Q9BZE2 481 aaKnown RBP23.34■■□□□ 1.33
RAB40C-207ENST00000563109 IL15P40933 162 aaPredicted RBP23.33■■□□□ 1.33
RAB40C-207ENST00000563109 GPSM2P81274 684 aa23.33■■□□□ 1.33
RAB40C-207ENST00000563109 CHRNDQ07001 517 aa23.33■■□□□ 1.33
RAB40C-207ENST00000563109 G3BP1Q13283 466 aaKnown RBP eCLIP23.33■■□□□ 1.33
RAB40C-207ENST00000563109 LRRC24Q50LG9 513 aa23.33■■□□□ 1.33
RAB40C-207ENST00000563109 ARHGAP27Q6ZUM4 889 aa23.33■■□□□ 1.33
RAB40C-207ENST00000563109 SLC51AQ86UW1 340 aa23.33■■□□□ 1.33
RAB40C-207ENST00000563109 SIRT2Q8IXJ6 389 aa23.33■■□□□ 1.33
RAB40C-207ENST00000563109 NSFL1CQ9UNZ2 370 aaKnown RBP23.33■■□□□ 1.33
RAB40C-207ENST00000563109 PCDHB15Q9Y5E8 787 aa23.33■■□□□ 1.33
RAB40C-207ENST00000563109 SNED1Q8TER0 1413 aa23.33■■□□□ 1.32
RAB40C-207ENST00000563109 SURF6O75683 361 aaKnown RBP23.32■■□□□ 1.32
RAB40C-207ENST00000563109 SUPT20HQ8NEM7 779 aa23.32■■□□□ 1.32
RAB40C-207ENST00000563109 TAOK3Q9H2K8 898 aa23.32■■□□□ 1.32
RAB40C-207ENST00000563109 RIPOR2Q9Y4F9 1068 aa23.32■■□□□ 1.32
RAB40C-207ENST00000563109 KCNJ4P48050 445 aa23.31■■□□□ 1.32
RAB40C-207ENST00000563109 FKBP4Q02790 459 aaKnown RBP eCLIP23.31■■□□□ 1.32
RAB40C-207ENST00000563109 HSP90AB4PQ58FF6 505 aa23.31■■□□□ 1.32
RAB40C-207ENST00000563109 PODXL2Q9NZ53 605 aa23.31■■□□□ 1.32
RAB40C-207ENST00000563109 GGA1Q9UJY5 639 aa23.31■■□□□ 1.32
RAB40C-207ENST00000563109 DUOX1Q9NRD9 1551 aa23.31■■□□□ 1.32
RAB40C-207ENST00000563109 SRCAPQ6ZRS2 3230 aa23.3■■□□□ 1.32
RAB40C-207ENST00000563109 UFL1O94874 794 aa23.3■■□□□ 1.32
RAB40C-207ENST00000563109 ATP2B4P23634 1241 aa23.3■■□□□ 1.32
RAB40C-207ENST00000563109 ATG9AQ7Z3C6 839 aa23.3■■□□□ 1.32
RAB40C-207ENST00000563109 PSMD1Q99460 953 aa23.3■■□□□ 1.32
RAB40C-207ENST00000563109 LTBP3Q9NS15 1303 aa23.3■■□□□ 1.32
RAB40C-207ENST00000563109 C6orf229H3BNL8 230 aa23.29■■□□□ 1.32
RAB40C-207ENST00000563109 ERC1Q8IUD2 1116 aa23.29■■□□□ 1.32
RAB40C-207ENST00000563109 HELBQ8NG08 1087 aaPredicted RBP23.29■■□□□ 1.32
RAB40C-207ENST00000563109 CEP126Q9P2H0 1117 aa23.29■■□□□ 1.32
RAB40C-207ENST00000563109 LEMD3Q9Y2U8 911 aa23.29■■□□□ 1.32
RAB40C-207ENST00000563109 NOP58Q9Y2X3 529 aaKnown RBP23.29■■□□□ 1.32
RAB40C-207ENST00000563109 NFKBIEO00221 500 aa23.28■■□□□ 1.32
RAB40C-207ENST00000563109 EYA3Q99504 573 aa23.28■■□□□ 1.32
RAB40C-207ENST00000563109 EXOC6BQ9Y2D4 811 aa23.28■■□□□ 1.32
RAB40C-207ENST00000563109 TAF5LO75529 589 aa23.27■■□□□ 1.32
RAB40C-207ENST00000563109 RASSF7Q02833 373 aa23.27■■□□□ 1.32
RAB40C-207ENST00000563109 HDAC1Q13547 482 aaPredicted RBP23.27■■□□□ 1.32
RAB40C-207ENST00000563109 TBC1D16Q8TBP0 767 aa23.27■■□□□ 1.32
RAB40C-207ENST00000563109 RTFDC1Q9BY42 306 aaPredicted RBP23.27■■□□□ 1.32
RAB40C-207ENST00000563109 CCDC88AQ3V6T2 1871 aa23.26■■□□□ 1.31
RAB40C-207ENST00000563109 PDE8BO95263 885 aa23.26■■□□□ 1.31
RAB40C-207ENST00000563109 RWDD1Q9H446 243 aaPredicted RBP23.26■■□□□ 1.31
RAB40C-207ENST00000563109 ZNF804BA4D1E1 1349 aa23.26■■□□□ 1.31
RAB40C-207ENST00000563109 PUM3Q15397 648 aaKnown RBP23.25■■□□□ 1.31
RAB40C-207ENST00000563109 VGLL2Q8N8G2 317 aa23.25■■□□□ 1.31
RAB40C-207ENST00000563109 POLLQ9UGP5 575 aa23.25■■□□□ 1.31
RAB40C-207ENST00000563109 SBF1O95248 1867 aa23.25■■□□□ 1.31
RAB40C-207ENST00000563109 RAB11FIP3O75154 756 aa23.24■■□□□ 1.31
RAB40C-207ENST00000563109 TFCP2Q12800 502 aa23.24■■□□□ 1.31
RAB40C-207ENST00000563109 UBE4AQ14139 1066 aa23.24■■□□□ 1.31
RAB40C-207ENST00000563109 ZNF277Q9NRM2 450 aaPredicted RBP23.24■■□□□ 1.31
RAB40C-207ENST00000563109 AKAP2Q9Y2D5 859 aa23.24■■□□□ 1.31
RAB40C-207ENST00000563109 ARAP2Q8WZ64 1704 aa23.24■■□□□ 1.31
RAB40C-207ENST00000563109 MED23Q9ULK4 1368 aa23.24■■□□□ 1.31
RAB40C-207ENST00000563109 PPIP5K2O43314 1243 aa23.23■■□□□ 1.31
RAB40C-207ENST00000563109 IARSP41252 1262 aaKnown RBP23.23■■□□□ 1.31
RAB40C-207ENST00000563109 WASHC4Q2M389 1173 aa23.23■■□□□ 1.31
RAB40C-207ENST00000563109 VPS33BQ9H267 617 aa23.23■■□□□ 1.31
RAB40C-207ENST00000563109 DICER1Q9UPY3 1922 aaKnown RBP23.23■■□□□ 1.31
RAB40C-207ENST00000563109 TIAM2Q8IVF5 1701 aa23.22■■□□□ 1.31
RAB40C-207ENST00000563109 APBB1O00213 710 aa23.22■■□□□ 1.31
RAB40C-207ENST00000563109 IFIT1P09914 478 aaKnown RBP23.22■■□□□ 1.31
RAB40C-207ENST00000563109 SLC5A1P13866 664 aa23.22■■□□□ 1.31
RAB40C-207ENST00000563109 LMNB1P20700 586 aa23.22■■□□□ 1.31
RAB40C-207ENST00000563109 ATP2B3Q16720 1220 aa23.22■■□□□ 1.31
RAB40C-207ENST00000563109 KIF1BPQ96EK5 621 aa23.22■■□□□ 1.31
RAB40C-207ENST00000563109 ZC3H12CQ9C0D7 883 aaKnown RBP23.22■■□□□ 1.31
RAB40C-207ENST00000563109 DCTPP1Q9H773 170 aa23.22■■□□□ 1.31
RAB40C-207ENST00000563109 SASH1O94885 1247 aa23.21■■□□□ 1.31
RAB40C-207ENST00000563109 AOC3Q16853 763 aa23.21■■□□□ 1.31
RAB40C-207ENST00000563109 ERICH6BQ5W0A0 696 aa23.21■■□□□ 1.31
RAB40C-207ENST00000563109 LARGE2Q8N3Y3 721 aa23.21■■□□□ 1.31
RAB40C-207ENST00000563109 LPIN2Q92539 896 aa23.21■■□□□ 1.31
RAB40C-207ENST00000563109 GPR101Q96P66 508 aaPredicted RBP23.21■■□□□ 1.31
RAB40C-207ENST00000563109 ZNF609O15014 1411 aa23.21■■□□□ 1.31
RAB40C-207ENST00000563109 G3V3G9 751 aa23.2■■□□□ 1.3
RAB40C-207ENST00000563109 RIMBP2O15034 1052 aa23.2■■□□□ 1.3
RAB40C-207ENST00000563109 KIAA2012Q0VF49 1180 aa23.2■■□□□ 1.3
RAB40C-207ENST00000563109 DCAF8Q5TAQ9 597 aa23.2■■□□□ 1.3
RAB40C-207ENST00000563109 RHPN1Q8TCX5 695 aa23.2■■□□□ 1.3
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