RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 HSP90B1P14625 803 aaKnown RBP20.15■□□□□ 0.82
SF3B3-203ENST00000562874 DOK7Q18PE1 504 aa20.15■□□□□ 0.82
SF3B3-203ENST00000562874 UBE3BQ7Z3V4 1068 aa20.15■□□□□ 0.82
SF3B3-203ENST00000562874 ADARB2Q9NS39 739 aaKnown RBP20.15■□□□□ 0.82
SF3B3-203ENST00000562874 RTL9Q8NET4 1388 aa20.14■□□□□ 0.81
SF3B3-203ENST00000562874 VAMP4O75379 141 aa20.14■□□□□ 0.81
SF3B3-203ENST00000562874 USP50Q70EL3 339 aaPredicted RBP20.14■□□□□ 0.81
SF3B3-203ENST00000562874 TRPM4Q8TD43 1214 aa20.14■□□□□ 0.81
SF3B3-203ENST00000562874 ZBTB12Q9Y330 459 aaPredicted RBP20.14■□□□□ 0.81
SF3B3-203ENST00000562874 TRAF5O00463 557 aa20.13■□□□□ 0.81
SF3B3-203ENST00000562874 PSMD14O00487 310 aa20.13■□□□□ 0.81
SF3B3-203ENST00000562874 ANKRD18AQ8IVF6 992 aa20.13■□□□□ 0.81
SF3B3-203ENST00000562874 GREM2Q9H772 168 aa20.13■□□□□ 0.81
SF3B3-203ENST00000562874 KCNQ5Q9NR82 932 aa20.13■□□□□ 0.81
SF3B3-203ENST00000562874 ANKIB1Q9P2G1 1089 aa20.13■□□□□ 0.81
SF3B3-203ENST00000562874 TNIP1Q15025 636 aa20.12■□□□□ 0.81
SF3B3-203ENST00000562874 DNAAF4Q8WXU2 420 aa20.12■□□□□ 0.81
SF3B3-203ENST00000562874 EYA3Q99504 573 aa20.12■□□□□ 0.81
SF3B3-203ENST00000562874 F6X3S4 739 aa20.11■□□□□ 0.81
SF3B3-203ENST00000562874 MICALL2Q8IY33 904 aa20.11■□□□□ 0.81
SF3B3-203ENST00000562874 TTLL11Q8NHH1 800 aa20.11■□□□□ 0.81
SF3B3-203ENST00000562874 PODXL2Q9NZ53 605 aa20.11■□□□□ 0.81
SF3B3-203ENST00000562874 GGA1Q9UJY5 639 aa20.11■□□□□ 0.81
SF3B3-203ENST00000562874 GCKRQ14397 625 aa20.1■□□□□ 0.81
SF3B3-203ENST00000562874 IFFO2Q5TF58 517 aa20.1■□□□□ 0.81
SF3B3-203ENST00000562874 CNOT7Q9UIV1 285 aaKnown RBP20.1■□□□□ 0.81
SF3B3-203ENST00000562874 ABT1Q9ULW3 272 aaKnown RBP20.1■□□□□ 0.81
SF3B3-203ENST00000562874 ECM29Q5VYK3 1845 aa20.1■□□□□ 0.81
SF3B3-203ENST00000562874 XDHP47989 1333 aa20.09■□□□□ 0.81
SF3B3-203ENST00000562874 H7C1W4 665 aa20.09■□□□□ 0.81
SF3B3-203ENST00000562874 VEGFBP49765 207 aa20.09■□□□□ 0.81
SF3B3-203ENST00000562874 HIRAP54198 1017 aaPredicted RBP20.09■□□□□ 0.81
SF3B3-203ENST00000562874 FAM161AQ3B820 660 aa20.09■□□□□ 0.81
SF3B3-203ENST00000562874 CDC5LQ99459 802 aaKnown RBP20.09■□□□□ 0.81
SF3B3-203ENST00000562874 GLIS2Q9BZE0 524 aaPredicted RBP20.09■□□□□ 0.81
SF3B3-203ENST00000562874 MYH16Q9H6N6 1097 aa20.09■□□□□ 0.81
SF3B3-203ENST00000562874 WTIPA6NIX2 430 aaPredicted RBP20.08■□□□□ 0.81
SF3B3-203ENST00000562874 CASP7P55210 303 aa20.08■□□□□ 0.81
SF3B3-203ENST00000562874 COL13A1Q5TAT6 717 aaPredicted RBP20.08■□□□□ 0.81
SF3B3-203ENST00000562874 ZC3H12CQ9C0D7 883 aaKnown RBP20.08■□□□□ 0.81
SF3B3-203ENST00000562874 ZNF521Q96K83 1311 aa20.07■□□□□ 0.8
SF3B3-203ENST00000562874 G3V3G9 751 aa20.07■□□□□ 0.8
SF3B3-203ENST00000562874 EGFRP00533 1210 aa20.07■□□□□ 0.8
SF3B3-203ENST00000562874 DCAF8Q5TAQ9 597 aa20.07■□□□□ 0.8
SF3B3-203ENST00000562874 SAMD7Q7Z3H4 446 aa20.07■□□□□ 0.8
SF3B3-203ENST00000562874 LINS1Q8NG48 757 aa20.07■□□□□ 0.8
SF3B3-203ENST00000562874 TBC1D10BQ4KMP7 808 aaPredicted RBP20.06■□□□□ 0.8
SF3B3-203ENST00000562874 MYH13Q9UKX3 1938 aa20.06■□□□□ 0.8
SF3B3-203ENST00000562874 ARAP2Q8WZ64 1704 aa20.05■□□□□ 0.8
SF3B3-203ENST00000562874 RASSF10A6NK89 507 aa20.05■□□□□ 0.8
SF3B3-203ENST00000562874 H7C1D1 291 aa20.05■□□□□ 0.8
SF3B3-203ENST00000562874 ITGA6P23229 1130 aa20.05■□□□□ 0.8
SF3B3-203ENST00000562874 PAXIP1Q6ZW49 1069 aaPredicted RBP20.05■□□□□ 0.8
SF3B3-203ENST00000562874 ZNF408Q9H9D4 720 aa20.05■□□□□ 0.8
SF3B3-203ENST00000562874 MED23Q9ULK4 1368 aa20.05■□□□□ 0.8
SF3B3-203ENST00000562874 ATP2B4P23634 1241 aa20.04■□□□□ 0.8
SF3B3-203ENST00000562874 GRM1Q13255 1194 aa20.04■□□□□ 0.8
SF3B3-203ENST00000562874 DEFB115Q30KQ5 88 aa20.04■□□□□ 0.8
SF3B3-203ENST00000562874 RBM26Q5T8P6 1007 aaKnown RBP20.04■□□□□ 0.8
SF3B3-203ENST00000562874 CST9Q5W186 159 aa20.04■□□□□ 0.8
SF3B3-203ENST00000562874 DLK2Q6UY11 383 aa20.04■□□□□ 0.8
SF3B3-203ENST00000562874 PLA2G12BQ9BX93 195 aa20.04■□□□□ 0.8
SF3B3-203ENST00000562874 MINPP1Q9UNW1 487 aa20.04■□□□□ 0.8
SF3B3-203ENST00000562874 IGHMBP2P38935 993 aaKnown RBP20.03■□□□□ 0.8
SF3B3-203ENST00000562874 BEND3Q5T5X7 828 aa20.03■□□□□ 0.8
SF3B3-203ENST00000562874 BSDC1Q9NW68 430 aaPredicted RBP20.03■□□□□ 0.8
SF3B3-203ENST00000562874 CELF2O95319 508 aaKnown RBP20.02■□□□□ 0.8
SF3B3-203ENST00000562874 CCT4P50991 539 aaKnown RBP20.02■□□□□ 0.8
SF3B3-203ENST00000562874 DPF2Q92785 391 aa20.02■□□□□ 0.8
SF3B3-203ENST00000562874 CHMP3Q9Y3E7 222 aa20.02■□□□□ 0.8
SF3B3-203ENST00000562874 ZNF609O15014 1411 aa20.02■□□□□ 0.79
SF3B3-203ENST00000562874 WDR33Q9C0J8 1336 aaKnown RBP20.02■□□□□ 0.79
SF3B3-203ENST00000562874 FOXN1O15353 648 aa20.01■□□□□ 0.79
SF3B3-203ENST00000562874 RPS12P25398 132 aaKnown RBP20.01■□□□□ 0.79
SF3B3-203ENST00000562874 KLRK1P26718 216 aa20.01■□□□□ 0.79
SF3B3-203ENST00000562874 KIF4BQ2VIQ3 1234 aa20.01■□□□□ 0.79
SF3B3-203ENST00000562874 CYP4F22Q6NT55 531 aa20.01■□□□□ 0.79
SF3B3-203ENST00000562874 SLC4A10Q6U841 1118 aa20.01■□□□□ 0.79
SF3B3-203ENST00000562874 PGAP2Q9UHJ9 254 aa20.01■□□□□ 0.79
SF3B3-203ENST00000562874 AKAP11Q9UKA4 1901 aa20.01■□□□□ 0.79
SF3B3-203ENST00000562874 ASTN2O75129 1339 aaPredicted RBP20.01■□□□□ 0.79
SF3B3-203ENST00000562874 VIL1P09327 827 aaKnown RBP20■□□□□ 0.79
SF3B3-203ENST00000562874 FBXW7Q969H0 707 aa20■□□□□ 0.79
SF3B3-203ENST00000562874 TLL2Q9Y6L7 1015 aa20■□□□□ 0.79
SF3B3-203ENST00000562874 ADM5C9JUS6 153 aa19.99■□□□□ 0.79
SF3B3-203ENST00000562874 CSF1RP07333 972 aa19.99■□□□□ 0.79
SF3B3-203ENST00000562874 FOXO4P98177 505 aa19.99■□□□□ 0.79
SF3B3-203ENST00000562874 EPHA10Q5JZY3 1008 aa19.99■□□□□ 0.79
SF3B3-203ENST00000562874 RSBN1LQ6PCB5 846 aaPredicted RBP19.99■□□□□ 0.79
SF3B3-203ENST00000562874 USP48Q86UV5 1035 aa19.99■□□□□ 0.79
SF3B3-203ENST00000562874 TXNRD3Q86VQ6 643 aa19.99■□□□□ 0.79
SF3B3-203ENST00000562874 ZC3H15Q8WU90 426 aaKnown RBP19.99■□□□□ 0.79
SF3B3-203ENST00000562874 CAPNS2Q96L46 248 aa19.99■□□□□ 0.79
SF3B3-203ENST00000562874 MPHOSPH8Q99549 860 aa19.99■□□□□ 0.79
SF3B3-203ENST00000562874 CDC37L1Q7L3B6 337 aa19.98■□□□□ 0.79
SF3B3-203ENST00000562874 MXD3Q9BW11 206 aa19.98■□□□□ 0.79
SF3B3-203ENST00000562874 GGA3Q9NZ52 723 aa19.98■□□□□ 0.79
SF3B3-203ENST00000562874 ANKRD18BA2A2Z9 1011 aa19.97■□□□□ 0.79
SF3B3-203ENST00000562874 GRM8O00222 908 aa19.97■□□□□ 0.79
SF3B3-203ENST00000562874 CHRNDQ07001 517 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms