RNA–Protein interactions for RNA: ENST00000562576.5

CNEP1R1-204, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 5 BASIC

Gene CNEP1R1, Length 656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-204ENST00000562576 DZIP3Q86Y13 1208 aaKnown RBP9.42□□□□□ -0.9
CNEP1R1-204ENST00000562576 VSIG10Q8N0Z9 540 aa9.42□□□□□ -0.9
CNEP1R1-204ENST00000562576 PSMD1Q99460 953 aa9.42□□□□□ -0.9
CNEP1R1-204ENST00000562576 MRC1P22897 1456 aa9.41□□□□□ -0.9
CNEP1R1-204ENST00000562576 ADM5C9JUS6 153 aa9.41□□□□□ -0.9
CNEP1R1-204ENST00000562576 RAD17O75943 681 aa9.41□□□□□ -0.9
CNEP1R1-204ENST00000562576 HMOX1P09601 288 aa9.41□□□□□ -0.9
CNEP1R1-204ENST00000562576 IL13P35225 146 aa9.41□□□□□ -0.9
CNEP1R1-204ENST00000562576 IL6STP40189 918 aaPredicted RBP9.41□□□□□ -0.9
CNEP1R1-204ENST00000562576 HLFQ16534 295 aa9.41□□□□□ -0.9
CNEP1R1-204ENST00000562576 AOC3Q16853 763 aa9.41□□□□□ -0.9
CNEP1R1-204ENST00000562576 NUTM1Q86Y26 1132 aa9.41□□□□□ -0.9
CNEP1R1-204ENST00000562576 GCC1Q96CN9 775 aa9.41□□□□□ -0.9
CNEP1R1-204ENST00000562576 R3HDMLQ9H3Y0 253 aa9.41□□□□□ -0.9
CNEP1R1-204ENST00000562576 USP16Q9Y5T5 823 aa9.41□□□□□ -0.9
CNEP1R1-204ENST00000562576 ABCC12Q96J65 1359 aa9.4□□□□□ -0.9
CNEP1R1-204ENST00000562576 NPC1L1Q9UHC9 1359 aa9.4□□□□□ -0.9
CNEP1R1-204ENST00000562576 GOLGA8CPA6NN73 597 aa9.4□□□□□ -0.9
CNEP1R1-204ENST00000562576 RGS20O76081 388 aa9.4□□□□□ -0.9
CNEP1R1-204ENST00000562576 ZNF157P51786 506 aaPredicted RBP9.4□□□□□ -0.9
CNEP1R1-204ENST00000562576 ZNF296Q8WUU4 475 aaPredicted RBP9.4□□□□□ -0.9
CNEP1R1-204ENST00000562576 SAGE1Q9NXZ1 904 aa9.4□□□□□ -0.9
CNEP1R1-204ENST00000562576 HTTP42858 3142 aa9.4□□□□□ -0.91
CNEP1R1-204ENST00000562576 HEG1Q9ULI3 1381 aa9.39□□□□□ -0.91
CNEP1R1-204ENST00000562576 ASTN2O75129 1339 aaPredicted RBP9.39□□□□□ -0.91
CNEP1R1-204ENST00000562576 BHMG1C9JSJ3 638 aaPredicted RBP9.39□□□□□ -0.91
CNEP1R1-204ENST00000562576 EVI5O60447 810 aa9.39□□□□□ -0.91
CNEP1R1-204ENST00000562576 CDC37L1Q7L3B6 337 aa9.39□□□□□ -0.91
CNEP1R1-204ENST00000562576 SAMD7Q7Z3H4 446 aa9.39□□□□□ -0.91
CNEP1R1-204ENST00000562576 NIM1KQ8IY84 436 aa9.39□□□□□ -0.91
CNEP1R1-204ENST00000562576 IL17REQ8NFR9 667 aa9.39□□□□□ -0.91
CNEP1R1-204ENST00000562576 ZDHHC16Q969W1 377 aa9.39□□□□□ -0.91
CNEP1R1-204ENST00000562576 DDX27Q96GQ7 796 aaKnown RBP9.39□□□□□ -0.91
CNEP1R1-204ENST00000562576 NIP7Q9Y221 180 aaKnown RBP eCLIP9.39□□□□□ -0.91
CNEP1R1-204ENST00000562576 UBR2Q8IWV8 1755 aa9.39□□□□□ -0.91
CNEP1R1-204ENST00000562576 NBPF26B4DH59 902 aa9.38□□□□□ -0.91
CNEP1R1-204ENST00000562576 PPIP5K2O43314 1243 aa9.38□□□□□ -0.91
CNEP1R1-204ENST00000562576 PTPN5P54829 565 aa9.38□□□□□ -0.91
CNEP1R1-204ENST00000562576 NBPF10Q6P3W6 841 aaKnown RBP9.38□□□□□ -0.91
CNEP1R1-204ENST00000562576 MOB2Q70IA6 237 aa9.38□□□□□ -0.91
CNEP1R1-204ENST00000562576 ZBED2Q9BTP6 218 aa9.38□□□□□ -0.91
CNEP1R1-204ENST00000562576 GBA2Q9HCG7 927 aaPredicted RBP9.38□□□□□ -0.91
CNEP1R1-204ENST00000562576 CNOT7Q9UIV1 285 aaKnown RBP9.38□□□□□ -0.91
CNEP1R1-204ENST00000562576 SCAF8Q9UPN6 1271 aaKnown RBP9.38□□□□□ -0.91
CNEP1R1-204ENST00000562576 CUL9Q8IWT3 2517 aa9.38□□□□□ -0.91
CNEP1R1-204ENST00000562576 YDJCA8MPS7 323 aa9.37□□□□□ -0.91
CNEP1R1-204ENST00000562576 SLC10A3P09131 477 aa9.37□□□□□ -0.91
CNEP1R1-204ENST00000562576 EN2P19622 333 aaPredicted RBP9.37□□□□□ -0.91
CNEP1R1-204ENST00000562576 ALDH1B1P30837 517 aa9.37□□□□□ -0.91
CNEP1R1-204ENST00000562576 MAP3K9P80192 1104 aa9.37□□□□□ -0.91
CNEP1R1-204ENST00000562576 TBC1D10BQ4KMP7 808 aaPredicted RBP9.37□□□□□ -0.91
CNEP1R1-204ENST00000562576 RBM26Q5T8P6 1007 aaKnown RBP9.37□□□□□ -0.91
CNEP1R1-204ENST00000562576 ZNF790Q6PG37 636 aa9.37□□□□□ -0.91
CNEP1R1-204ENST00000562576 TPTE2Q6XPS3 522 aa9.37□□□□□ -0.91
CNEP1R1-204ENST00000562576 MRPL50Q8N5N7 158 aaKnown RBP9.37□□□□□ -0.91
CNEP1R1-204ENST00000562576 SLC17A8Q8NDX2 589 aa9.37□□□□□ -0.91
CNEP1R1-204ENST00000562576 LARP6Q9BRS8 491 aaKnown RBP9.37□□□□□ -0.91
CNEP1R1-204ENST00000562576 POLR3GLQ9BT43 218 aa9.37□□□□□ -0.91
CNEP1R1-204ENST00000562576 NBPF3Q9H094 633 aa9.37□□□□□ -0.91
CNEP1R1-204ENST00000562576 COL6A3P12111 3177 aa9.37□□□□□ -0.91
CNEP1R1-204ENST00000562576 TRIOBPQ9H2D6 2365 aa9.37□□□□□ -0.91
CNEP1R1-204ENST00000562576 GTPBP6O43824 516 aaPredicted RBP9.36□□□□□ -0.91
CNEP1R1-204ENST00000562576 CRY2Q49AN0 593 aa9.36□□□□□ -0.91
CNEP1R1-204ENST00000562576 THSD4Q6ZMP0 1018 aa9.36□□□□□ -0.91
CNEP1R1-204ENST00000562576 TTC5Q8N0Z6 440 aa9.36□□□□□ -0.91
CNEP1R1-204ENST00000562576 CCDC102AQ96A19 550 aa9.36□□□□□ -0.91
CNEP1R1-204ENST00000562576 KCNQ5Q9NR82 932 aa9.36□□□□□ -0.91
CNEP1R1-204ENST00000562576 HDAC9Q9UKV0 1011 aa9.36□□□□□ -0.91
CNEP1R1-204ENST00000562576 ZNRF3Q9ULT6 936 aa9.36□□□□□ -0.91
CNEP1R1-204ENST00000562576 POLR2AP24928 1970 aaKnown RBP9.35□□□□□ -0.91
CNEP1R1-204ENST00000562576 CENPFP49454 3210 aa9.35□□□□□ -0.91
CNEP1R1-204ENST00000562576 KRT26Q7Z3Y9 468 aa9.35□□□□□ -0.91
CNEP1R1-204ENST00000562576 RASAL3Q86YV0 1011 aa9.35□□□□□ -0.91
CNEP1R1-204ENST00000562576 BCL2L13Q9BXK5 485 aa9.35□□□□□ -0.91
CNEP1R1-204ENST00000562576 PPEF1O14829 653 aaPredicted RBP9.34□□□□□ -0.91
CNEP1R1-204ENST00000562576 HOXA10P31260 410 aaPredicted RBP9.34□□□□□ -0.91
CNEP1R1-204ENST00000562576 CAP1Q01518 475 aa9.34□□□□□ -0.91
CNEP1R1-204ENST00000562576 MFSD10Q14728 455 aa9.34□□□□□ -0.91
CNEP1R1-204ENST00000562576 FBXO46Q6PJ61 603 aaPredicted RBP9.34□□□□□ -0.91
CNEP1R1-204ENST00000562576 NGEFQ8N5V2 710 aa9.34□□□□□ -0.91
CNEP1R1-204ENST00000562576 C2orf69Q8N8R5 385 aa9.34□□□□□ -0.91
CNEP1R1-204ENST00000562576 ZC3H15Q8WU90 426 aaKnown RBP9.34□□□□□ -0.91
CNEP1R1-204ENST00000562576 WNT2BQ93097 391 aa9.34□□□□□ -0.91
CNEP1R1-204ENST00000562576 AKAP11Q9UKA4 1901 aa9.34□□□□□ -0.91
CNEP1R1-204ENST00000562576 CEP290O15078 2479 aa9.33□□□□□ -0.92
CNEP1R1-204ENST00000562576 RANBP2P49792 3224 aaKnown RBP9.33□□□□□ -0.92
CNEP1R1-204ENST00000562576 H0YGN5 161 aa9.33□□□□□ -0.92
CNEP1R1-204ENST00000562576 GPR25O00155 361 aa9.33□□□□□ -0.92
CNEP1R1-204ENST00000562576 SLC24A1O60721 1099 aa9.33□□□□□ -0.92
CNEP1R1-204ENST00000562576 GPTP24298 496 aa9.33□□□□□ -0.92
CNEP1R1-204ENST00000562576 GTF2E1P29083 439 aaPredicted RBP9.33□□□□□ -0.92
CNEP1R1-204ENST00000562576 PRAMEF18Q5VWM3 479 aa9.33□□□□□ -0.92
CNEP1R1-204ENST00000562576 CLEC4GQ6UXB4 293 aa9.33□□□□□ -0.92
CNEP1R1-204ENST00000562576 TEX13AQ9BXU3 409 aaPredicted RBP9.33□□□□□ -0.92
CNEP1R1-204ENST00000562576 ADAM33Q9BZ11 813 aa9.33□□□□□ -0.92
CNEP1R1-204ENST00000562576 BRCA2P51587 3418 aa9.33□□□□□ -0.92
CNEP1R1-204ENST00000562576 UBE2Q2LH0YL09 131 aa9.32□□□□□ -0.92
CNEP1R1-204ENST00000562576 PKN2Q16513 984 aaKnown RBP9.32□□□□□ -0.92
CNEP1R1-204ENST00000562576 SUSD4Q5VX71 490 aa9.32□□□□□ -0.92
CNEP1R1-204ENST00000562576 CC2D2BQ6DHV5 1058 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms