RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 MINPP1Q9UNW1 487 aa20.97■□□□□ 0.95
CLK3-207ENST00000562389 PPIP5K2O43314 1243 aa20.96■□□□□ 0.95
CLK3-207ENST00000562389 KIAA2012Q0VF49 1180 aa20.96■□□□□ 0.95
CLK3-207ENST00000562389 LARGE2Q8N3Y3 721 aa20.96■□□□□ 0.95
CLK3-207ENST00000562389 ANKIB1Q9P2G1 1089 aa20.96■□□□□ 0.95
CLK3-207ENST00000562389 POLLQ9UGP5 575 aa20.96■□□□□ 0.95
CLK3-207ENST00000562389 LRRFIP2Q9Y608 721 aaKnown RBP20.96■□□□□ 0.95
CLK3-207ENST00000562389 AOC3Q16853 763 aa20.95■□□□□ 0.94
CLK3-207ENST00000562389 TAF7LQ5H9L4 462 aa20.95■□□□□ 0.94
CLK3-207ENST00000562389 TBC1D16Q8TBP0 767 aa20.95■□□□□ 0.94
CLK3-207ENST00000562389 JDP2Q8WYK2 163 aa20.95■□□□□ 0.94
CLK3-207ENST00000562389 GGA1Q9UJY5 639 aa20.95■□□□□ 0.94
CLK3-207ENST00000562389 FZD9O00144 591 aa20.94■□□□□ 0.94
CLK3-207ENST00000562389 ATP2B4P23634 1241 aa20.94■□□□□ 0.94
CLK3-207ENST00000562389 ITPRIPQ8IWB1 547 aa20.94■□□□□ 0.94
CLK3-207ENST00000562389 ZNF594Q96JF6 807 aaPredicted RBP20.94■□□□□ 0.94
CLK3-207ENST00000562389 EYA3Q99504 573 aa20.94■□□□□ 0.94
CLK3-207ENST00000562389 GLTPD2A6NH11 291 aa20.93■□□□□ 0.94
CLK3-207ENST00000562389 C6orf229H3BNL8 230 aa20.93■□□□□ 0.94
CLK3-207ENST00000562389 UFL1O94874 794 aa20.93■□□□□ 0.94
CLK3-207ENST00000562389 LDHAL6AQ6ZMR3 332 aa20.93■□□□□ 0.94
CLK3-207ENST00000562389 NIM1KQ8IY84 436 aa20.93■□□□□ 0.94
CLK3-207ENST00000562389 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.93■□□□□ 0.94
CLK3-207ENST00000562389 ANKRD2Q9GZV1 360 aa20.93■□□□□ 0.94
CLK3-207ENST00000562389 WDR90Q96KV7 1748 aa20.92■□□□□ 0.94
CLK3-207ENST00000562389 PLIN1O60240 522 aa20.92■□□□□ 0.94
CLK3-207ENST00000562389 CHRNDQ07001 517 aa20.92■□□□□ 0.94
CLK3-207ENST00000562389 WASHC4Q2M389 1173 aa20.92■□□□□ 0.94
CLK3-207ENST00000562389 PANK1Q8TE04 598 aa20.92■□□□□ 0.94
CLK3-207ENST00000562389 GPBP1L1Q9HC44 474 aaPredicted RBP20.92■□□□□ 0.94
CLK3-207ENST00000562389 KDM2BQ8NHM5 1336 aa20.92■□□□□ 0.94
CLK3-207ENST00000562389 GNAI2P04899 355 aa20.91■□□□□ 0.94
CLK3-207ENST00000562389 RFX5P48382 616 aaPredicted RBP20.91■□□□□ 0.94
CLK3-207ENST00000562389 DPY19L2Q6NUT2 758 aa20.91■□□□□ 0.94
CLK3-207ENST00000562389 ZNF526Q8TF50 670 aaPredicted RBP20.91■□□□□ 0.94
CLK3-207ENST00000562389 CNNM1Q9NRU3 951 aa20.91■□□□□ 0.94
CLK3-207ENST00000562389 LEMD3Q9Y2U8 911 aa20.91■□□□□ 0.94
CLK3-207ENST00000562389 ZNF541Q9H0D2 1346 aa20.9■□□□□ 0.94
CLK3-207ENST00000562389 MTX1Q13505 466 aa20.9■□□□□ 0.94
CLK3-207ENST00000562389 MED23Q9ULK4 1368 aa20.89■□□□□ 0.93
CLK3-207ENST00000562389 ZBTB7BO15156 539 aaPredicted RBP20.89■□□□□ 0.93
CLK3-207ENST00000562389 EIF6P56537 245 aaKnown RBP20.89■□□□□ 0.93
CLK3-207ENST00000562389 GPR101Q96P66 508 aaPredicted RBP20.89■□□□□ 0.93
CLK3-207ENST00000562389 RIMBP2O15034 1052 aa20.88■□□□□ 0.93
CLK3-207ENST00000562389 PTPN12Q05209 780 aaKnown RBP20.88■□□□□ 0.93
CLK3-207ENST00000562389 PDE3AQ14432 1141 aa20.88■□□□□ 0.93
CLK3-207ENST00000562389 MVPQ14764 893 aaKnown RBP20.88■□□□□ 0.93
CLK3-207ENST00000562389 PUS3Q9BZE2 481 aaKnown RBP20.88■□□□□ 0.93
CLK3-207ENST00000562389 ZC3H12CQ9C0D7 883 aaKnown RBP20.88■□□□□ 0.93
CLK3-207ENST00000562389 ZNRF3Q9ULT6 936 aa20.88■□□□□ 0.93
CLK3-207ENST00000562389 RIPOR2Q9Y4F9 1068 aa20.88■□□□□ 0.93
CLK3-207ENST00000562389 ZNF804BA4D1E1 1349 aa20.87■□□□□ 0.93
CLK3-207ENST00000562389 MROH5Q6ZUA9 1318 aa20.87■□□□□ 0.93
CLK3-207ENST00000562389 KLHDC4Q8TBB5 520 aa20.87■□□□□ 0.93
CLK3-207ENST00000562389 SCN4AP35499 1836 aa20.86■□□□□ 0.93
CLK3-207ENST00000562389 PSME4Q14997 1843 aa20.86■□□□□ 0.93
CLK3-207ENST00000562389 TAF5LO75529 589 aa20.86■□□□□ 0.93
CLK3-207ENST00000562389 DDNO94850 711 aaPredicted RBP20.86■□□□□ 0.93
CLK3-207ENST00000562389 LRRC24Q50LG9 513 aa20.86■□□□□ 0.93
CLK3-207ENST00000562389 FBXO3Q9UK99 471 aa20.86■□□□□ 0.93
CLK3-207ENST00000562389 DDX19BQ9UMR2 479 aa20.86■□□□□ 0.93
CLK3-207ENST00000562389 WTIPA6NIX2 430 aaPredicted RBP20.85■□□□□ 0.93
CLK3-207ENST00000562389 YDJCA8MPS7 323 aa20.85■□□□□ 0.93
CLK3-207ENST00000562389 SRGAP3O43295 1099 aa20.85■□□□□ 0.93
CLK3-207ENST00000562389 ECE2O60344 883 aa20.85■□□□□ 0.93
CLK3-207ENST00000562389 KCNJ4P48050 445 aa20.85■□□□□ 0.93
CLK3-207ENST00000562389 GPC2Q8N158 579 aa20.85■□□□□ 0.93
CLK3-207ENST00000562389 HELBQ8NG08 1087 aaPredicted RBP20.85■□□□□ 0.93
CLK3-207ENST00000562389 L3MBTL3Q96JM7 780 aaPredicted RBP20.85■□□□□ 0.93
CLK3-207ENST00000562389 DBNDD1Q9H9R9 158 aa20.85■□□□□ 0.93
CLK3-207ENST00000562389 NMRK2Q9NPI5 230 aa20.85■□□□□ 0.93
CLK3-207ENST00000562389 COG6Q9Y2V7 657 aa20.85■□□□□ 0.93
CLK3-207ENST00000562389 SCN9AQ15858 1988 aa20.85■□□□□ 0.93
CLK3-207ENST00000562389 EYA2O00167 538 aa20.84■□□□□ 0.93
CLK3-207ENST00000562389 C20orf194Q5TEA3 1177 aa20.84■□□□□ 0.93
CLK3-207ENST00000562389 COPRSQ9NQ92 184 aa20.84■□□□□ 0.93
CLK3-207ENST00000562389 IRS2Q9Y4H2 1338 aa20.83■□□□□ 0.93
CLK3-207ENST00000562389 KIF3CO14782 793 aa20.83■□□□□ 0.93
CLK3-207ENST00000562389 CIAO1O76071 339 aa20.83■□□□□ 0.93
CLK3-207ENST00000562389 RRP1P56182 461 aaKnown RBP20.83■□□□□ 0.93
CLK3-207ENST00000562389 CXCL9Q07325 125 aa20.83■□□□□ 0.93
CLK3-207ENST00000562389 DOK7Q18PE1 504 aa20.83■□□□□ 0.93
CLK3-207ENST00000562389 C15orf52Q6ZUT6 534 aaKnown RBP20.83■□□□□ 0.93
CLK3-207ENST00000562389 CHMP4BQ9H444 224 aaKnown RBP20.83■□□□□ 0.93
CLK3-207ENST00000562389 G3V3G9 751 aa20.82■□□□□ 0.92
CLK3-207ENST00000562389 UBE4AQ14139 1066 aa20.82■□□□□ 0.92
CLK3-207ENST00000562389 METTL24Q5JXM2 366 aa20.82■□□□□ 0.92
CLK3-207ENST00000562389 DCAF8Q5TAQ9 597 aa20.82■□□□□ 0.92
CLK3-207ENST00000562389 CIAPIN1Q6FI81 312 aa20.82■□□□□ 0.92
CLK3-207ENST00000562389 VGLL2Q8N8G2 317 aa20.82■□□□□ 0.92
CLK3-207ENST00000562389 C1orf115Q9H7X2 142 aa20.82■□□□□ 0.92
CLK3-207ENST00000562389 RRAGCQ9HB90 399 aa20.82■□□□□ 0.92
CLK3-207ENST00000562389 PNMA6EA0A0J9YXQ4 647 aa20.81■□□□□ 0.92
CLK3-207ENST00000562389 POTECB2RU33 542 aa20.81■□□□□ 0.92
CLK3-207ENST00000562389 SNAP23O00161 211 aa20.81■□□□□ 0.92
CLK3-207ENST00000562389 KLRK1P26718 216 aa20.81■□□□□ 0.92
CLK3-207ENST00000562389 TNIP1Q15025 636 aa20.81■□□□□ 0.92
CLK3-207ENST00000562389 ATG9AQ7Z3C6 839 aa20.81■□□□□ 0.92
CLK3-207ENST00000562389 PODNQ7Z5L7 613 aa20.81■□□□□ 0.92
CLK3-207ENST00000562389 TXNRD3Q86VQ6 643 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms