RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 SRCIN1Q9C0H9 1055 aa26.22■■□□□ 1.79
TPM1-232ENST00000561425 GGA1Q9UJY5 639 aa26.22■■□□□ 1.79
TPM1-232ENST00000561425 ADAMTSL1Q8N6G6 1762 aa26.22■■□□□ 1.79
TPM1-232ENST00000561425 UTYO14607 1347 aa26.21■■□□□ 1.79
TPM1-232ENST00000561425 ITGA6P23229 1130 aa26.21■■□□□ 1.79
TPM1-232ENST00000561425 BRPF1P55201 1214 aaPredicted RBP26.21■■□□□ 1.79
TPM1-232ENST00000561425 TNIP1Q15025 636 aa26.21■■□□□ 1.79
TPM1-232ENST00000561425 GPRC5DQ9NZD1 345 aa26.21■■□□□ 1.79
TPM1-232ENST00000561425 ANKIB1Q9P2G1 1089 aa26.21■■□□□ 1.79
TPM1-232ENST00000561425 MYH3P11055 1940 aa26.21■■□□□ 1.79
TPM1-232ENST00000561425 RIMBP2O15034 1052 aa26.2■■□□□ 1.78
TPM1-232ENST00000561425 ITGBL1O95965 494 aaPredicted RBP26.2■■□□□ 1.78
TPM1-232ENST00000561425 ATP2B4P23634 1241 aa26.2■■□□□ 1.78
TPM1-232ENST00000561425 FAM161AQ3B820 660 aa26.2■■□□□ 1.78
TPM1-232ENST00000561425 PASKQ96RG2 1323 aa26.19■■□□□ 1.78
TPM1-232ENST00000561425 RAD17O75943 681 aa26.19■■□□□ 1.78
TPM1-232ENST00000561425 UFL1O94874 794 aa26.19■■□□□ 1.78
TPM1-232ENST00000561425 LMOD1P29536 600 aaPredicted RBP26.19■■□□□ 1.78
TPM1-232ENST00000561425 EPHA10Q5JZY3 1008 aa26.19■■□□□ 1.78
TPM1-232ENST00000561425 SLC4A10Q6U841 1118 aa26.19■■□□□ 1.78
TPM1-232ENST00000561425 GPR101Q96P66 508 aaPredicted RBP26.19■■□□□ 1.78
TPM1-232ENST00000561425 ZC3H12CQ9C0D7 883 aaKnown RBP26.19■■□□□ 1.78
TPM1-232ENST00000561425 DBNDD1Q9H9R9 158 aa26.19■■□□□ 1.78
TPM1-232ENST00000561425 CEP350Q5VT06 3117 aa26.19■■□□□ 1.78
TPM1-232ENST00000561425 USP50Q70EL3 339 aaPredicted RBP26.18■■□□□ 1.78
TPM1-232ENST00000561425 IGHMBP2P38935 993 aaKnown RBP26.17■■□□□ 1.78
TPM1-232ENST00000561425 GMPSP49915 693 aaPredicted RBP26.17■■□□□ 1.78
TPM1-232ENST00000561425 EAPPQ56P03 285 aaPredicted RBP26.17■■□□□ 1.78
TPM1-232ENST00000561425 KAZALD1Q96I82 304 aa26.17■■□□□ 1.78
TPM1-232ENST00000561425 WTIPA6NIX2 430 aaPredicted RBP26.16■■□□□ 1.78
TPM1-232ENST00000561425 ECE2O60344 883 aa26.16■■□□□ 1.78
TPM1-232ENST00000561425 DOK7Q18PE1 504 aa26.16■■□□□ 1.78
TPM1-232ENST00000561425 DPF2Q92785 391 aa26.16■■□□□ 1.78
TPM1-232ENST00000561425 KCNQ5Q9NR82 932 aa26.16■■□□□ 1.78
TPM1-232ENST00000561425 C9orf78Q9NZ63 289 aaPredicted RBP26.16■■□□□ 1.78
TPM1-232ENST00000561425 ANKRD18BA2A2Z9 1011 aa26.15■■□□□ 1.78
TPM1-232ENST00000561425 NBPF7P0C2Y1 421 aaPredicted RBP26.15■■□□□ 1.78
TPM1-232ENST00000561425 HTRA3P83110 453 aa26.15■■□□□ 1.78
TPM1-232ENST00000561425 LMBR1LQ6UX01 489 aa26.15■■□□□ 1.78
TPM1-232ENST00000561425 BCL2L13Q9BXK5 485 aa26.15■■□□□ 1.78
TPM1-232ENST00000561425 ADARB2Q9NS39 739 aaKnown RBP26.15■■□□□ 1.78
TPM1-232ENST00000561425 PSMD14O00487 310 aa26.14■■□□□ 1.78
TPM1-232ENST00000561425 CCT4P50991 539 aaKnown RBP26.14■■□□□ 1.78
TPM1-232ENST00000561425 PGAP2Q9UHJ9 254 aa26.14■■□□□ 1.78
TPM1-232ENST00000561425 LEMD3Q9Y2U8 911 aa26.14■■□□□ 1.78
TPM1-232ENST00000561425 VIL1P09327 827 aaKnown RBP26.13■■□□□ 1.77
TPM1-232ENST00000561425 IFIT5Q13325 482 aaKnown RBP26.13■■□□□ 1.77
TPM1-232ENST00000561425 CNTROBQ8N137 903 aa26.13■■□□□ 1.77
TPM1-232ENST00000561425 MPHOSPH8Q99549 860 aa26.13■■□□□ 1.77
TPM1-232ENST00000561425 ANKRD2Q9GZV1 360 aa26.13■■□□□ 1.77
TPM1-232ENST00000561425 SMC4Q9NTJ3 1288 aa26.13■■□□□ 1.77
TPM1-232ENST00000561425 MED23Q9ULK4 1368 aa26.12■■□□□ 1.77
TPM1-232ENST00000561425 KLRG1Q96E93 195 aa26.12■■□□□ 1.77
TPM1-232ENST00000561425 SUCLG2Q96I99 432 aa26.12■■□□□ 1.77
TPM1-232ENST00000561425 CNOT7Q9UIV1 285 aaKnown RBP26.12■■□□□ 1.77
TPM1-232ENST00000561425 CLEC11AQ9Y240 323 aa26.12■■□□□ 1.77
TPM1-232ENST00000561425 RPS12P25398 132 aaKnown RBP26.11■■□□□ 1.77
TPM1-232ENST00000561425 RARSP54136 660 aaKnown RBP26.11■■□□□ 1.77
TPM1-232ENST00000561425 RABL6Q3YEC7 729 aaPredicted RBP26.11■■□□□ 1.77
TPM1-232ENST00000561425 PODNQ7Z5L7 613 aa26.11■■□□□ 1.77
TPM1-232ENST00000561425 USP44Q9H0E7 712 aa26.11■■□□□ 1.77
TPM1-232ENST00000561425 ZBTB12Q9Y330 459 aaPredicted RBP26.11■■□□□ 1.77
TPM1-232ENST00000561425 MAP1SQ66K74 1059 aaPredicted RBP26.1■■□□□ 1.77
TPM1-232ENST00000561425 CREBZFQ9NS37 354 aa26.1■■□□□ 1.77
TPM1-232ENST00000561425 ZNF609O15014 1411 aa26.1■■□□□ 1.77
TPM1-232ENST00000561425 HIRAP54198 1017 aaPredicted RBP26.09■■□□□ 1.77
TPM1-232ENST00000561425 CHRNDQ07001 517 aa26.09■■□□□ 1.77
TPM1-232ENST00000561425 CCDC57Q2TAC2 916 aa26.08■■□□□ 1.77
TPM1-232ENST00000561425 JMYQ8N9B5 988 aa26.08■■□□□ 1.77
TPM1-232ENST00000561425 ZC3H15Q8WU90 426 aaKnown RBP26.08■■□□□ 1.77
TPM1-232ENST00000561425 NOB1Q9ULX3 412 aaKnown RBP26.08■■□□□ 1.77
TPM1-232ENST00000561425 ZNF804BA4D1E1 1349 aa26.08■■□□□ 1.77
TPM1-232ENST00000561425 IRS2Q9Y4H2 1338 aa26.08■■□□□ 1.77
TPM1-232ENST00000561425 SHTN1A0MZ66 631 aa26.07■■□□□ 1.76
TPM1-232ENST00000561425 H7C1D1 291 aa26.07■■□□□ 1.76
TPM1-232ENST00000561425 C15orf52Q6ZUT6 534 aaKnown RBP26.07■■□□□ 1.76
TPM1-232ENST00000561425 TXNRD3Q86VQ6 643 aa26.07■■□□□ 1.76
TPM1-232ENST00000561425 MICALL2Q8IY33 904 aa26.07■■□□□ 1.76
TPM1-232ENST00000561425 SCN9AQ15858 1988 aa26.06■■□□□ 1.76
TPM1-232ENST00000561425 ANKRD44Q8N8A2 993 aa26.06■■□□□ 1.76
TPM1-232ENST00000561425 ARHGAP45Q92619 1136 aa26.06■■□□□ 1.76
TPM1-232ENST00000561425 GMLQ99445 158 aa26.06■■□□□ 1.76
TPM1-232ENST00000561425 COA1Q9GZY4 146 aa26.06■■□□□ 1.76
TPM1-232ENST00000561425 G3V3G9 751 aa26.05■■□□□ 1.76
TPM1-232ENST00000561425 DCAF8Q5TAQ9 597 aa26.05■■□□□ 1.76
TPM1-232ENST00000561425 AGBL3Q8NEM8 1001 aa26.05■■□□□ 1.76
TPM1-232ENST00000561425 TRPM4Q8TD43 1214 aa26.05■■□□□ 1.76
TPM1-232ENST00000561425 ZNF594Q96JF6 807 aaPredicted RBP26.05■■□□□ 1.76
TPM1-232ENST00000561425 BICC1Q9H694 974 aaKnown RBP26.05■■□□□ 1.76
TPM1-232ENST00000561425 CHMP3Q9Y3E7 222 aa26.05■■□□□ 1.76
TPM1-232ENST00000561425 RSBN1LQ6PCB5 846 aaPredicted RBP26.04■■□□□ 1.76
TPM1-232ENST00000561425 LDHAL6AQ6ZMR3 332 aa26.04■■□□□ 1.76
TPM1-232ENST00000561425 API5Q9BZZ5 524 aaKnown RBP26.04■■□□□ 1.76
TPM1-232ENST00000561425 SPEF2Q9C093 1822 aa26.03■■□□□ 1.76
TPM1-232ENST00000561425 USP17L3A6NCW0 530 aa26.03■■□□□ 1.76
TPM1-232ENST00000561425 USP17L4A6NCW7 530 aa26.03■■□□□ 1.76
TPM1-232ENST00000561425 HNRNPUQ00839 825 aaKnown RBP eCLIP26.03■■□□□ 1.76
TPM1-232ENST00000561425 USP17L1Q7RTZ2 530 aa26.03■■□□□ 1.76
TPM1-232ENST00000561425 TMEM88BA6NKF7 163 aa26.02■■□□□ 1.76
TPM1-232ENST00000561425 KLRK1P26718 216 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms