RNA–Protein interactions for RNA: ENST00000561423.2

PRKXP1-201, Transcript of PRKX pseudogene 1, humanhuman

BASIC

Gene PRKXP1, Length 1,122 nt, Biotype processed pseudogene, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKXP1-201ENST00000561423 RIC3Q7Z5B4 369 aa18.36■□□□□ 0.53
PRKXP1-201ENST00000561423 ZBTB38Q8NAP3 1195 aaPredicted RBP18.36■□□□□ 0.53
PRKXP1-201ENST00000561423 ADM5C9JUS6 153 aa18.35■□□□□ 0.53
PRKXP1-201ENST00000561423 HUNKP57058 714 aa18.35■□□□□ 0.53
PRKXP1-201ENST00000561423 RBM26Q5T8P6 1007 aaKnown RBP18.35■□□□□ 0.53
PRKXP1-201ENST00000561423 KRT26Q7Z3Y9 468 aa18.35■□□□□ 0.53
PRKXP1-201ENST00000561423 MYD88Q99836 296 aa18.35■□□□□ 0.53
PRKXP1-201ENST00000561423 PODXL2Q9NZ53 605 aa18.35■□□□□ 0.53
PRKXP1-201ENST00000561423 ELL2O00472 640 aaPredicted RBP18.34■□□□□ 0.53
PRKXP1-201ENST00000561423 FAM161AQ3B820 660 aa18.34■□□□□ 0.53
PRKXP1-201ENST00000561423 IFT57Q9NWB7 429 aa18.34■□□□□ 0.53
PRKXP1-201ENST00000561423 APAF1O14727 1248 aa18.33■□□□□ 0.52
PRKXP1-201ENST00000561423 UFL1O94874 794 aa18.33■□□□□ 0.52
PRKXP1-201ENST00000561423 NOGQ13253 232 aa18.33■□□□□ 0.52
PRKXP1-201ENST00000561423 KIF4BQ2VIQ3 1234 aa18.33■□□□□ 0.52
PRKXP1-201ENST00000561423 JARID2Q92833 1246 aaPredicted RBP18.33■□□□□ 0.52
PRKXP1-201ENST00000561423 PRKRIP1Q9H875 184 aaPredicted RBP18.33■□□□□ 0.52
PRKXP1-201ENST00000561423 ASTN2O75129 1339 aaPredicted RBP18.32■□□□□ 0.52
PRKXP1-201ENST00000561423 CCDC85CA6NKD9 419 aa18.32■□□□□ 0.52
PRKXP1-201ENST00000561423 FAM155AB1AL88 458 aaPredicted RBP18.32■□□□□ 0.52
PRKXP1-201ENST00000561423 PCCAP05165 728 aaPredicted RBP18.32■□□□□ 0.52
PRKXP1-201ENST00000561423 VIL1P09327 827 aaKnown RBP18.32■□□□□ 0.52
PRKXP1-201ENST00000561423 DCPSQ96C86 337 aaKnown RBP18.32■□□□□ 0.52
PRKXP1-201ENST00000561423 CCDC85AQ96PX6 553 aaPredicted RBP18.32■□□□□ 0.52
PRKXP1-201ENST00000561423 ZC3H12CQ9C0D7 883 aaKnown RBP18.32■□□□□ 0.52
PRKXP1-201ENST00000561423 MCOLN1Q9GZU1 580 aa18.32■□□□□ 0.52
PRKXP1-201ENST00000561423 GBA2Q9HCG7 927 aaPredicted RBP18.32■□□□□ 0.52
PRKXP1-201ENST00000561423 GNAI1P63096 354 aa18.31■□□□□ 0.52
PRKXP1-201ENST00000561423 CCDC152Q4G0S7 254 aa18.31■□□□□ 0.52
PRKXP1-201ENST00000561423 RGMBQ6NW40 437 aa18.31■□□□□ 0.52
PRKXP1-201ENST00000561423 C8orf58Q8NAV2 365 aa18.31■□□□□ 0.52
PRKXP1-201ENST00000561423 CCDC191Q8NCU4 936 aa18.31■□□□□ 0.52
PRKXP1-201ENST00000561423 GGA3Q9NZ52 723 aa18.31■□□□□ 0.52
PRKXP1-201ENST00000561423 ANKIB1Q9P2G1 1089 aa18.31■□□□□ 0.52
PRKXP1-201ENST00000561423 GGA1Q9UJY5 639 aa18.31■□□□□ 0.52
PRKXP1-201ENST00000561423 PDE8AO60658 829 aa18.3■□□□□ 0.52
PRKXP1-201ENST00000561423 METTL22Q9BUU2 404 aaPredicted RBP18.3■□□□□ 0.52
PRKXP1-201ENST00000561423 CWC25Q9NXE8 425 aaPredicted RBP18.3■□□□□ 0.52
PRKXP1-201ENST00000561423 ZNF609O15014 1411 aa18.3■□□□□ 0.52
PRKXP1-201ENST00000561423 HSP90B1P14625 803 aaKnown RBP18.29■□□□□ 0.52
PRKXP1-201ENST00000561423 C2orf69Q8N8R5 385 aa18.29■□□□□ 0.52
PRKXP1-201ENST00000561423 SCN9AQ15858 1988 aa18.29■□□□□ 0.52
PRKXP1-201ENST00000561423 G3V3G9 751 aa18.28■□□□□ 0.52
PRKXP1-201ENST00000561423 ZNF280AP59817 542 aaPredicted RBP18.28■□□□□ 0.52
PRKXP1-201ENST00000561423 CALD1Q05682 793 aaKnown RBP18.28■□□□□ 0.52
PRKXP1-201ENST00000561423 DCAF8Q5TAQ9 597 aa18.28■□□□□ 0.52
PRKXP1-201ENST00000561423 RSBN1LQ6PCB5 846 aaPredicted RBP18.28■□□□□ 0.52
PRKXP1-201ENST00000561423 XDHP47989 1333 aa18.27■□□□□ 0.52
PRKXP1-201ENST00000561423 RGS19P49795 217 aa18.27■□□□□ 0.52
PRKXP1-201ENST00000561423 KIF23Q02241 960 aaPredicted RBP18.27■□□□□ 0.52
PRKXP1-201ENST00000561423 DGKZQ13574 1117 aa18.27■□□□□ 0.52
PRKXP1-201ENST00000561423 ANKRD18AQ8IVF6 992 aa18.27■□□□□ 0.52
PRKXP1-201ENST00000561423 SULF1Q8IWU6 871 aa18.27■□□□□ 0.52
PRKXP1-201ENST00000561423 TSPYL6Q8N831 410 aa18.27■□□□□ 0.52
PRKXP1-201ENST00000561423 AGBL3Q8NEM8 1001 aa18.27■□□□□ 0.52
PRKXP1-201ENST00000561423 CDCA5Q96FF9 252 aa18.27■□□□□ 0.52
PRKXP1-201ENST00000561423 DDX58O95786 925 aaKnown RBP18.26■□□□□ 0.51
PRKXP1-201ENST00000561423 IGKV5-2P06315 115 aa18.26■□□□□ 0.51
PRKXP1-201ENST00000561423 ZNF157P51786 506 aaPredicted RBP18.26■□□□□ 0.51
PRKXP1-201ENST00000561423 ANGEL2Q5VTE6 544 aaKnown RBP18.26■□□□□ 0.51
PRKXP1-201ENST00000561423 CCDC102AQ96A19 550 aa18.26■□□□□ 0.51
PRKXP1-201ENST00000561423 GMLQ99445 158 aa18.26■□□□□ 0.51
PRKXP1-201ENST00000561423 MAP3K2Q9Y2U5 619 aa18.26■□□□□ 0.51
PRKXP1-201ENST00000561423 WTIPA6NIX2 430 aaPredicted RBP18.25■□□□□ 0.51
PRKXP1-201ENST00000561423 SLC10A3P09131 477 aa18.25■□□□□ 0.51
PRKXP1-201ENST00000561423 CTSWP56202 376 aa18.25■□□□□ 0.51
PRKXP1-201ENST00000561423 MLLT1Q03111 559 aaPredicted RBP18.25■□□□□ 0.51
PRKXP1-201ENST00000561423 SCARF1Q14162 830 aa18.25■□□□□ 0.51
PRKXP1-201ENST00000561423 CCDC30Q5VVM6 783 aa18.25■□□□□ 0.51
PRKXP1-201ENST00000561423 ATP2B4P23634 1241 aa18.24■□□□□ 0.51
PRKXP1-201ENST00000561423 SAGE1Q9NXZ1 904 aa18.24■□□□□ 0.51
PRKXP1-201ENST00000561423 PI4KAP2A4QPH2 592 aa18.23■□□□□ 0.51
PRKXP1-201ENST00000561423 KSR2Q6VAB6 950 aa18.23■□□□□ 0.51
PRKXP1-201ENST00000561423 PI4KAP1Q8N8J0 262 aa18.23■□□□□ 0.51
PRKXP1-201ENST00000561423 TTLL11Q8NHH1 800 aa18.23■□□□□ 0.51
PRKXP1-201ENST00000561423 TSR2Q969E8 191 aaKnown RBP18.23■□□□□ 0.51
PRKXP1-201ENST00000561423 MYOZ2Q9NPC6 264 aa18.23■□□□□ 0.51
PRKXP1-201ENST00000561423 RNF186Q9NXI6 227 aa18.23■□□□□ 0.51
PRKXP1-201ENST00000561423 USP17L3A6NCW0 530 aa18.22■□□□□ 0.51
PRKXP1-201ENST00000561423 USP17L4A6NCW7 530 aa18.22■□□□□ 0.51
PRKXP1-201ENST00000561423 USP17L8P0C7I0 530 aa18.22■□□□□ 0.51
PRKXP1-201ENST00000561423 USP17L1Q7RTZ2 530 aa18.22■□□□□ 0.51
PRKXP1-201ENST00000561423 PODNQ7Z5L7 613 aa18.22■□□□□ 0.51
PRKXP1-201ENST00000561423 RASAL3Q86YV0 1011 aa18.22■□□□□ 0.51
PRKXP1-201ENST00000561423 CDC5LQ99459 802 aaKnown RBP18.22■□□□□ 0.51
PRKXP1-201ENST00000561423 GREM2Q9H772 168 aa18.22■□□□□ 0.51
PRKXP1-201ENST00000561423 SCAF8Q9UPN6 1271 aaKnown RBP18.22■□□□□ 0.51
PRKXP1-201ENST00000561423 MED23Q9ULK4 1368 aa18.21■□□□□ 0.51
PRKXP1-201ENST00000561423 CASP8AP2Q9UKL3 1982 aa18.21■□□□□ 0.51
PRKXP1-201ENST00000561423 TRPA1O75762 1119 aa18.21■□□□□ 0.51
PRKXP1-201ENST00000561423 CWF19L2Q2TBE0 894 aaKnown RBP18.21■□□□□ 0.51
PRKXP1-201ENST00000561423 CSRNP1Q96S65 589 aa18.21■□□□□ 0.51
PRKXP1-201ENST00000561423 BSDC1Q9NW68 430 aaPredicted RBP18.21■□□□□ 0.51
PRKXP1-201ENST00000561423 MINPP1Q9UNW1 487 aa18.21■□□□□ 0.51
PRKXP1-201ENST00000561423 PITPNM2Q9BZ72 1349 aa18.21■□□□□ 0.51
PRKXP1-201ENST00000561423 NEURL1BA8MQ27 555 aa18.2■□□□□ 0.5
PRKXP1-201ENST00000561423 MXD3Q9BW11 206 aa18.2■□□□□ 0.5
PRKXP1-201ENST00000561423 CHMP4AQ9BY43 222 aa18.2■□□□□ 0.5
PRKXP1-201ENST00000561423 PSME4Q14997 1843 aa18.19■□□□□ 0.5
PRKXP1-201ENST00000561423 DACT2Q5SW24 774 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms