RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 KRT26Q7Z3Y9 468 aa15.34■□□□□ 0.05
CARMIL3-204ENST00000561354 ZC3H12CQ9C0D7 883 aaKnown RBP15.34■□□□□ 0.05
CARMIL3-204ENST00000561354 KCNQ5Q9NR82 932 aa15.34■□□□□ 0.05
CARMIL3-204ENST00000561354 RTL9Q8NET4 1388 aa15.34■□□□□ 0.05
CARMIL3-204ENST00000561354 EGFRP00533 1210 aa15.33■□□□□ 0.04
CARMIL3-204ENST00000561354 VIL1P09327 827 aaKnown RBP15.33■□□□□ 0.04
CARMIL3-204ENST00000561354 RGS19P49795 217 aa15.33■□□□□ 0.04
CARMIL3-204ENST00000561354 DCPSQ96C86 337 aaKnown RBP15.33■□□□□ 0.04
CARMIL3-204ENST00000561354 IFT57Q9NWB7 429 aa15.33■□□□□ 0.04
CARMIL3-204ENST00000561354 CCDC85CA6NKD9 419 aa15.32■□□□□ 0.04
CARMIL3-204ENST00000561354 CALD1Q05682 793 aaKnown RBP15.32■□□□□ 0.04
CARMIL3-204ENST00000561354 RGMBQ6NW40 437 aa15.32■□□□□ 0.04
CARMIL3-204ENST00000561354 DLK2Q6UY11 383 aa15.32■□□□□ 0.04
CARMIL3-204ENST00000561354 C2orf69Q8N8R5 385 aa15.32■□□□□ 0.04
CARMIL3-204ENST00000561354 CCDC191Q8NCU4 936 aa15.32■□□□□ 0.04
CARMIL3-204ENST00000561354 PHAXQ9H814 394 aaKnown RBP15.32■□□□□ 0.04
CARMIL3-204ENST00000561354 GBA2Q9HCG7 927 aaPredicted RBP15.32■□□□□ 0.04
CARMIL3-204ENST00000561354 SEC31BQ9NQW1 1179 aa15.32■□□□□ 0.04
CARMIL3-204ENST00000561354 FAM155AB1AL88 458 aaPredicted RBP15.31■□□□□ 0.04
CARMIL3-204ENST00000561354 PCCAP05165 728 aaPredicted RBP15.31■□□□□ 0.04
CARMIL3-204ENST00000561354 GNAI1P63096 354 aa15.31■□□□□ 0.04
CARMIL3-204ENST00000561354 KIF4BQ2VIQ3 1234 aa15.31■□□□□ 0.04
CARMIL3-204ENST00000561354 FAM161AQ3B820 660 aa15.31■□□□□ 0.04
CARMIL3-204ENST00000561354 CCDC152Q4G0S7 254 aa15.31■□□□□ 0.04
CARMIL3-204ENST00000561354 RBM26Q5T8P6 1007 aaKnown RBP15.31■□□□□ 0.04
CARMIL3-204ENST00000561354 CCDC102AQ96A19 550 aa15.31■□□□□ 0.04
CARMIL3-204ENST00000561354 ZIC5Q96T25 663 aa15.31■□□□□ 0.04
CARMIL3-204ENST00000561354 ZNF609O15014 1411 aa15.31■□□□□ 0.04
CARMIL3-204ENST00000561354 ADM5C9JUS6 153 aa15.3■□□□□ 0.04
CARMIL3-204ENST00000561354 PDE8AO60658 829 aa15.3■□□□□ 0.04
CARMIL3-204ENST00000561354 UFL1O94874 794 aa15.3■□□□□ 0.04
CARMIL3-204ENST00000561354 POLR2AP24928 1970 aaKnown RBP15.3■□□□□ 0.04
CARMIL3-204ENST00000561354 MYD88Q99836 296 aa15.3■□□□□ 0.04
CARMIL3-204ENST00000561354 CHMP4AQ9BY43 222 aa15.3■□□□□ 0.04
CARMIL3-204ENST00000561354 MCOLN1Q9GZU1 580 aa15.3■□□□□ 0.04
CARMIL3-204ENST00000561354 ANKIB1Q9P2G1 1089 aa15.3■□□□□ 0.04
CARMIL3-204ENST00000561354 GGA1Q9UJY5 639 aa15.3■□□□□ 0.04
CARMIL3-204ENST00000561354 SCN9AQ15858 1988 aa15.29■□□□□ 0.04
CARMIL3-204ENST00000561354 G3V3G9 751 aa15.29■□□□□ 0.04
CARMIL3-204ENST00000561354 APAF1O14727 1248 aa15.29■□□□□ 0.04
CARMIL3-204ENST00000561354 ZNF280AP59817 542 aaPredicted RBP15.29■□□□□ 0.04
CARMIL3-204ENST00000561354 MLLT1Q03111 559 aaPredicted RBP15.29■□□□□ 0.04
CARMIL3-204ENST00000561354 DCAF8Q5TAQ9 597 aa15.29■□□□□ 0.04
CARMIL3-204ENST00000561354 SULF1Q8IWU6 871 aa15.29■□□□□ 0.04
CARMIL3-204ENST00000561354 AGBL3Q8NEM8 1001 aa15.29■□□□□ 0.04
CARMIL3-204ENST00000561354 METTL22Q9BUU2 404 aaPredicted RBP15.29■□□□□ 0.04
CARMIL3-204ENST00000561354 PRKRIP1Q9H875 184 aaPredicted RBP15.29■□□□□ 0.04
CARMIL3-204ENST00000561354 CWC25Q9NXE8 425 aaPredicted RBP15.29■□□□□ 0.04
CARMIL3-204ENST00000561354 CASP8AP2Q9UKL3 1982 aa15.29■□□□□ 0.04
CARMIL3-204ENST00000561354 ELL2O00472 640 aaPredicted RBP15.28■□□□□ 0.04
CARMIL3-204ENST00000561354 DDX58O95786 925 aaKnown RBP15.28■□□□□ 0.04
CARMIL3-204ENST00000561354 RSBN1LQ6PCB5 846 aaPredicted RBP15.28■□□□□ 0.04
CARMIL3-204ENST00000561354 SAGE1Q9NXZ1 904 aa15.28■□□□□ 0.04
CARMIL3-204ENST00000561354 GGA3Q9NZ52 723 aa15.28■□□□□ 0.04
CARMIL3-204ENST00000561354 XDHP47989 1333 aa15.27■□□□□ 0.04
CARMIL3-204ENST00000561354 ZNF157P51786 506 aaPredicted RBP15.27■□□□□ 0.04
CARMIL3-204ENST00000561354 KIF23Q02241 960 aaPredicted RBP15.27■□□□□ 0.04
CARMIL3-204ENST00000561354 DGKZQ13574 1117 aa15.27■□□□□ 0.04
CARMIL3-204ENST00000561354 CCDC30Q5VVM6 783 aa15.27■□□□□ 0.04
CARMIL3-204ENST00000561354 ANKRD18AQ8IVF6 992 aa15.27■□□□□ 0.04
CARMIL3-204ENST00000561354 C8orf58Q8NAV2 365 aa15.27■□□□□ 0.04
CARMIL3-204ENST00000561354 ATP2B4P23634 1241 aa15.26■□□□□ 0.03
CARMIL3-204ENST00000561354 PODNQ7Z5L7 613 aa15.26■□□□□ 0.03
CARMIL3-204ENST00000561354 GMLQ99445 158 aa15.26■□□□□ 0.03
CARMIL3-204ENST00000561354 ASTN2O75129 1339 aaPredicted RBP15.25■□□□□ 0.03
CARMIL3-204ENST00000561354 SLC10A3P09131 477 aa15.25■□□□□ 0.03
CARMIL3-204ENST00000561354 USP17L8P0C7I0 530 aa15.25■□□□□ 0.03
CARMIL3-204ENST00000561354 FKBP1BP68106 108 aa15.25■□□□□ 0.03
CARMIL3-204ENST00000561354 SCARF1Q14162 830 aa15.25■□□□□ 0.03
CARMIL3-204ENST00000561354 ANGEL2Q5VTE6 544 aaKnown RBP15.25■□□□□ 0.03
CARMIL3-204ENST00000561354 JARID2Q92833 1246 aaPredicted RBP15.25■□□□□ 0.03
CARMIL3-204ENST00000561354 CDCA5Q96FF9 252 aa15.25■□□□□ 0.03
CARMIL3-204ENST00000561354 CCDC85AQ96PX6 553 aaPredicted RBP15.25■□□□□ 0.03
CARMIL3-204ENST00000561354 CDC5LQ99459 802 aaKnown RBP15.25■□□□□ 0.03
CARMIL3-204ENST00000561354 PSME4Q14997 1843 aa15.24■□□□□ 0.03
CARMIL3-204ENST00000561354 PITPNM2Q9BZ72 1349 aa15.24■□□□□ 0.03
CARMIL3-204ENST00000561354 USP17L3A6NCW0 530 aa15.24■□□□□ 0.03
CARMIL3-204ENST00000561354 USP17L4A6NCW7 530 aa15.24■□□□□ 0.03
CARMIL3-204ENST00000561354 CTSWP56202 376 aa15.24■□□□□ 0.03
CARMIL3-204ENST00000561354 KSR2Q6VAB6 950 aa15.24■□□□□ 0.03
CARMIL3-204ENST00000561354 USP17L1Q7RTZ2 530 aa15.24■□□□□ 0.03
CARMIL3-204ENST00000561354 REM2Q8IYK8 340 aaPredicted RBP15.24■□□□□ 0.03
CARMIL3-204ENST00000561354 MYOZ2Q9NPC6 264 aa15.24■□□□□ 0.03
CARMIL3-204ENST00000561354 RNF186Q9NXI6 227 aa15.24■□□□□ 0.03
CARMIL3-204ENST00000561354 MAP3K2Q9Y2U5 619 aa15.24■□□□□ 0.03
CARMIL3-204ENST00000561354 TTLL11Q8NHH1 800 aa15.23■□□□□ 0.03
CARMIL3-204ENST00000561354 CSRNP1Q96S65 589 aa15.23■□□□□ 0.03
CARMIL3-204ENST00000561354 BSDC1Q9NW68 430 aaPredicted RBP15.23■□□□□ 0.03
CARMIL3-204ENST00000561354 MED23Q9ULK4 1368 aa15.23■□□□□ 0.03
CARMIL3-204ENST00000561354 PI4KAP2A4QPH2 592 aa15.22■□□□□ 0.03
CARMIL3-204ENST00000561354 TRPA1O75762 1119 aa15.22■□□□□ 0.03
CARMIL3-204ENST00000561354 IGKV5-2P06315 115 aa15.22■□□□□ 0.03
CARMIL3-204ENST00000561354 TSPYL6Q8N831 410 aa15.22■□□□□ 0.03
CARMIL3-204ENST00000561354 PI4KAP1Q8N8J0 262 aa15.22■□□□□ 0.03
CARMIL3-204ENST00000561354 SLC34A2O95436 690 aa15.21■□□□□ 0.03
CARMIL3-204ENST00000561354 NEXNQ0ZGT2 675 aa15.21■□□□□ 0.03
CARMIL3-204ENST00000561354 RASAL3Q86YV0 1011 aa15.21■□□□□ 0.03
CARMIL3-204ENST00000561354 MINPP1Q9UNW1 487 aa15.21■□□□□ 0.03
CARMIL3-204ENST00000561354 AKAP11Q9UKA4 1901 aa15.21■□□□□ 0.02
CARMIL3-204ENST00000561354 WTIPA6NIX2 430 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms