RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 C7orf43Q8WVR3 580 aa12.82□□□□□ -0.36
LRRC28-221ENST00000561276 MPHOSPH8Q99549 860 aa12.82□□□□□ -0.36
LRRC28-221ENST00000561276 BSDC1Q9NW68 430 aaPredicted RBP12.82□□□□□ -0.36
LRRC28-221ENST00000561276 ATP6V0A2Q9Y487 856 aa12.82□□□□□ -0.36
LRRC28-221ENST00000561276 CCDC88AQ3V6T2 1871 aa12.81□□□□□ -0.36
LRRC28-221ENST00000561276 YBX3P16989 372 aaKnown RBP eCLIP12.81□□□□□ -0.361e-6■■■□□ 17.7
LRRC28-221ENST00000561276 PTPN12Q05209 780 aaKnown RBP12.81□□□□□ -0.36
LRRC28-221ENST00000561276 CEP85Q6P2H3 762 aa12.81□□□□□ -0.36
LRRC28-221ENST00000561276 TMC4Q7Z404 712 aa12.81□□□□□ -0.36
LRRC28-221ENST00000561276 SSH3Q8TE77 659 aa12.81□□□□□ -0.36
LRRC28-221ENST00000561276 TMX4Q9H1E5 349 aaPredicted RBP12.81□□□□□ -0.36
LRRC28-221ENST00000561276 FER1L6Q2WGJ9 1857 aa12.8□□□□□ -0.36
LRRC28-221ENST00000561276 AAMPQ13685 434 aa12.8□□□□□ -0.36
LRRC28-221ENST00000561276 SLC51AQ86UW1 340 aa12.8□□□□□ -0.36
LRRC28-221ENST00000561276 SIRT2Q8IXJ6 389 aa12.8□□□□□ -0.36
LRRC28-221ENST00000561276 PUS3Q9BZE2 481 aaKnown RBP12.8□□□□□ -0.36
LRRC28-221ENST00000561276 MINPP1Q9UNW1 487 aa12.8□□□□□ -0.36
LRRC28-221ENST00000561276 SRCAPQ6ZRS2 3230 aa12.8□□□□□ -0.36
LRRC28-221ENST00000561276 LRRC37AA6NMS7 1700 aa12.79□□□□□ -0.36
LRRC28-221ENST00000561276 LRRC24Q50LG9 513 aa12.79□□□□□ -0.36
LRRC28-221ENST00000561276 CC2D2BQ6DHV5 1058 aa12.79□□□□□ -0.36
LRRC28-221ENST00000561276 ARHGAP27Q6ZUM4 889 aa12.79□□□□□ -0.36
LRRC28-221ENST00000561276 SIL1Q9H173 461 aa12.79□□□□□ -0.36
LRRC28-221ENST00000561276 COPRSQ9NQ92 184 aa12.79□□□□□ -0.36
LRRC28-221ENST00000561276 CNNM1Q9NRU3 951 aa12.79□□□□□ -0.36
LRRC28-221ENST00000561276 NSFL1CQ9UNZ2 370 aaKnown RBP12.79□□□□□ -0.36
LRRC28-221ENST00000561276 PA2G4Q9UQ80 394 aaKnown RBP12.79□□□□□ -0.36
LRRC28-221ENST00000561276 RIPOR2Q9Y4F9 1068 aa12.79□□□□□ -0.36
LRRC28-221ENST00000561276 PCDHB15Q9Y5E8 787 aa12.79□□□□□ -0.36
LRRC28-221ENST00000561276 A0A1B0GUL6 1792 aa12.79□□□□□ -0.36
LRRC28-221ENST00000561276 GRIPAP1Q4V328 841 aa12.78□□□□□ -0.36
LRRC28-221ENST00000561276 SOGA3Q5TF21 947 aa12.78□□□□□ -0.36
LRRC28-221ENST00000561276 RTKN2Q8IZC4 609 aa12.78□□□□□ -0.36
LRRC28-221ENST00000561276 SBF1O95248 1867 aa12.78□□□□□ -0.36
LRRC28-221ENST00000561276 EYA2O00167 538 aa12.77□□□□□ -0.37
LRRC28-221ENST00000561276 GRIN3BO60391 1043 aa12.77□□□□□ -0.37
LRRC28-221ENST00000561276 HMMRO75330 724 aa12.77□□□□□ -0.37
LRRC28-221ENST00000561276 SURF6O75683 361 aaKnown RBP12.77□□□□□ -0.37
LRRC28-221ENST00000561276 GPSM2P81274 684 aa12.77□□□□□ -0.37
LRRC28-221ENST00000561276 CHRNDQ07001 517 aa12.77□□□□□ -0.37
LRRC28-221ENST00000561276 CCDC93Q567U6 631 aa12.77□□□□□ -0.37
LRRC28-221ENST00000561276 ATG9AQ7Z3C6 839 aa12.77□□□□□ -0.37
LRRC28-221ENST00000561276 MPNDQ8N594 471 aa12.77□□□□□ -0.37
LRRC28-221ENST00000561276 HELBQ8NG08 1087 aaPredicted RBP12.77□□□□□ -0.37
LRRC28-221ENST00000561276 ANKIB1Q9P2G1 1089 aa12.77□□□□□ -0.37
LRRC28-221ENST00000561276 FBXO3Q9UK99 471 aa12.77□□□□□ -0.37
LRRC28-221ENST00000561276 WTIPA6NIX2 430 aaPredicted RBP12.76□□□□□ -0.37
LRRC28-221ENST00000561276 TAF5LO75529 589 aa12.76□□□□□ -0.37
LRRC28-221ENST00000561276 NEFLP07196 543 aa12.76□□□□□ -0.37
LRRC28-221ENST00000561276 G3BP1Q13283 466 aaKnown RBP eCLIP12.76□□□□□ -0.37
LRRC28-221ENST00000561276 DPP8Q6V1X1 898 aaPredicted RBP12.76□□□□□ -0.37
LRRC28-221ENST00000561276 ANKRD2Q9GZV1 360 aa12.76□□□□□ -0.37
LRRC28-221ENST00000561276 PODXL2Q9NZ53 605 aa12.76□□□□□ -0.37
LRRC28-221ENST00000561276 MROH5Q6ZUA9 1318 aa12.76□□□□□ -0.37
LRRC28-221ENST00000561276 C6orf229H3BNL8 230 aa12.75□□□□□ -0.37
LRRC28-221ENST00000561276 CIAO1O76071 339 aa12.75□□□□□ -0.37
LRRC28-221ENST00000561276 LTBP1Q14766 1721 aa12.75□□□□□ -0.37
LRRC28-221ENST00000561276 POLLQ9UGP5 575 aa12.75□□□□□ -0.37
LRRC28-221ENST00000561276 NOP58Q9Y2X3 529 aaKnown RBP12.75□□□□□ -0.37
LRRC28-221ENST00000561276 SNED1Q8TER0 1413 aa12.74□□□□□ -0.37
LRRC28-221ENST00000561276 XDHP47989 1333 aa12.74□□□□□ -0.37
LRRC28-221ENST00000561276 PDE8BO95263 885 aa12.74□□□□□ -0.37
LRRC28-221ENST00000561276 IL15P40933 162 aaPredicted RBP12.74□□□□□ -0.37
LRRC28-221ENST00000561276 FKBP4Q02790 459 aaKnown RBP eCLIP12.74□□□□□ -0.37
LRRC28-221ENST00000561276 METTL24Q5JXM2 366 aa12.74□□□□□ -0.37
LRRC28-221ENST00000561276 TBC1D16Q8TBP0 767 aa12.74□□□□□ -0.37
LRRC28-221ENST00000561276 PSMD1Q99460 953 aa12.74□□□□□ -0.37
LRRC28-221ENST00000561276 RTFDC1Q9BY42 306 aaPredicted RBP12.74□□□□□ -0.37
LRRC28-221ENST00000561276 CEP126Q9P2H0 1117 aa12.74□□□□□ -0.37
LRRC28-221ENST00000561276 GGA1Q9UJY5 639 aa12.74□□□□□ -0.37
LRRC28-221ENST00000561276 EXOC6BQ9Y2D4 811 aa12.74□□□□□ -0.37
LRRC28-221ENST00000561276 DICER1Q9UPY3 1922 aaKnown RBP12.74□□□□□ -0.37
LRRC28-221ENST00000561276 SNAP23O00161 211 aa12.73□□□□□ -0.37
LRRC28-221ENST00000561276 NFKBIEO00221 500 aa12.73□□□□□ -0.37
LRRC28-221ENST00000561276 SASH1O94885 1247 aa12.73□□□□□ -0.37
LRRC28-221ENST00000561276 ATP2B4P23634 1241 aa12.73□□□□□ -0.37
LRRC28-221ENST00000561276 OS9Q13438 667 aaPredicted RBP12.73□□□□□ -0.37
LRRC28-221ENST00000561276 VGLL2Q8N8G2 317 aa12.73□□□□□ -0.37
LRRC28-221ENST00000561276 SUPT20HQ8NEM7 779 aa12.73□□□□□ -0.37
LRRC28-221ENST00000561276 TAOK3Q9H2K8 898 aa12.73□□□□□ -0.37
LRRC28-221ENST00000561276 LEMD3Q9Y2U8 911 aa12.73□□□□□ -0.37
LRRC28-221ENST00000561276 ZBTB12Q9Y330 459 aaPredicted RBP12.73□□□□□ -0.37
LRRC28-221ENST00000561276 CHD4Q14839 1912 aa12.72□□□□□ -0.37
LRRC28-221ENST00000561276 GOLGB1Q14789 3259 aaKnown RBP12.72□□□□□ -0.37
LRRC28-221ENST00000561276 ZNF804BA4D1E1 1349 aa12.72□□□□□ -0.37
LRRC28-221ENST00000561276 LTBP3Q9NS15 1303 aa12.72□□□□□ -0.37
LRRC28-221ENST00000561276 RIMBP2O15034 1052 aa12.72□□□□□ -0.37
LRRC28-221ENST00000561276 UFL1O94874 794 aa12.72□□□□□ -0.37
LRRC28-221ENST00000561276 KCNJ4P48050 445 aa12.72□□□□□ -0.37
LRRC28-221ENST00000561276 RASSF7Q02833 373 aa12.72□□□□□ -0.37
LRRC28-221ENST00000561276 TFCP2Q12800 502 aa12.72□□□□□ -0.37
LRRC28-221ENST00000561276 WASHC4Q2M389 1173 aa12.72□□□□□ -0.37
LRRC28-221ENST00000561276 HSP90AB4PQ58FF6 505 aa12.72□□□□□ -0.37
LRRC28-221ENST00000561276 RWDD1Q9H446 243 aaPredicted RBP12.72□□□□□ -0.37
LRRC28-221ENST00000561276 DCTPP1Q9H773 170 aa12.72□□□□□ -0.37
LRRC28-221ENST00000561276 ZNF277Q9NRM2 450 aaPredicted RBP12.72□□□□□ -0.37
LRRC28-221ENST00000561276 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.72□□□□□ -0.37
LRRC28-221ENST00000561276 DUOX1Q9NRD9 1551 aa12.72□□□□□ -0.37
LRRC28-221ENST00000561276 APBB1O00213 710 aa12.71□□□□□ -0.37
LRRC28-221ENST00000561276 IGHDP01880 384 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms